FFCP PHASE1:Hg19::chr10:10836846..10836864,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=207107|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=18383|TSSclassifier=S|UniProt=|association_with_transcript=12bp_to_ENST00000446372,NR_027082,uc001ikf.1_5end|coexpression_cluster_id=C1562|description=CAGE_peak_4_at_SFTA1P_5end|id=chr10:10836846..10836864,-|ontology_enrichment_celltype=CL:0000077!3.81e-14!19;CL:0000066!1.48e-13!254;CL:0000076!1.40e-11!62;CL:0002368!1.59e-11!13;CL:0002076!3.83e-11!43;CL:0002321!1.37e-10!248;CL:0000220!2.28e-10!246;CL:0002202!3.66e-07!9;CL:0002632!3.66e-07!9;CL:0000223!4.73e-07!59|ontology_enrichment_celltype_v019=CL:0002368;7.74e-10;13!CL:0000077;1.77e-09;19!CL:0000082;9.49e-07;19!CL:0002202;9.75e-07;9!CL:0002632;9.75e-07;9|ontology_enrichment_celltype_v019_2=CL:0002368,7.09e-10,13;CL:0000077,2.03e-09,19;CL:0002076,9.72e-09,42;CL:0000066,2.43e-07,253;CL:0000082,9.05e-07,19;CL:0002202,9.54e-07,9;CL:0002632,9.54e-07,9|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:1749!3.07e-07!14|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005157!1.56e-09!51;UBERON:0002048!2.58e-07!22;UBERON:0000117!2.58e-07!22;UBERON:0000171!2.58e-07!22;UBERON:0000170!2.58e-07!22;UBERON:0005597!2.58e-07!22;UBERON:0000118!2.58e-07!22;UBERON:0005153!3.58e-07!37;UBERON:0005178!6.30e-07!34;UBERON:0002224!6.30e-07!34|ontology_enrichment_uberon_v019=UBERON:0002048;9.53e-13;22!UBERON:0000117;9.53e-13;22!UBERON:0000171;9.53e-13;22!UBERON:0000170;9.53e-13;22!UBERON:0004807;6.56e-10;22!UBERON:0005178;9.98e-09;34!UBERON:0002224;9.98e-09;34!UBERON:0005181;1.55e-07;35!UBERON:0000065;2.47e-07;44!UBERON:0004802;9.49e-07;19!UBERON:0000115;9.49e-07;19|ontology_enrichment_uberon_v019_2=UBERON:0002048,9.08e-13,22;UBERON:0000117,9.08e-13,22;UBERON:0000171,9.08e-13,22;UBERON:0000170,9.08e-13,22;UBERON:0005597,9.08e-13,22;UBERON:0000118,9.08e-13,22;UBERON:0005178,1.90e-09,34;UBERON:0002224,1.90e-09,34;UBERON:0000065,2.73e-09,54;UBERON:0005181,4.02e-09,35;UBERON:0005153,1.11e-08,37;UBERON:0005911,1.86e-08,82;UBERON:0001004,2.52e-08,74;UBERON:0008947,2.98e-08,38;UBERON:0003258,2.98e-08,38;UBERON:0004807,1.47e-07,28;UBERON:0004802,9.05e-07,19;UBERON:0000115,9.05e-07,19;UBERON:0000915,9.14e-07,52|phase1_expression=0,0,0,0,0,0,0,0,0,2.94880723801811,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0.572471974262113,0.273748850145768,1.12988375635323,0,0,0,0,0,0,1.83884244895785,0.90361775633475,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,1.0478326039817,0.728590576585084,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0.993943903390637,0,0,0,0,0,0,1.97334038733728,0,0.67355336034844,0,0.302714855289863,0,0.70296429550139,0,0,0.149448680551801,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453728732640084,0.179389635688862,0.640672166455702,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,1.73934767846967,0.818238361772504,2.29443676311203,0,0.132529768321485,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.057870056657,0,0,0,0,0,0,0.171567810298526,0.768251997860379,3.37205259772859,0,1.29623823221941,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,1.84780341018745,0.708875486211932,0.895585227028483,0.290633938513962,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,1.00917975910825,0,0.51336800074665,0,0,0,0,0,0.514414748524284,0,0.266422179016099,0.428933980974443,0,0,0,1.42156779497018,0,2.1100756394171,0.871533458600294,0.599837947092342,0,0,0,4.79249710983165,0,0,0.144781306667579,0,0.358121926479791,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0.391602314925481,0.686286847621712,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601519410909855,0,0,0,0,0,0,0,0,0,0,0,0.647747748306418,0,0.270946437543853,0,0.509752546090077,0,0.223874754722178,0,0,0,2.29610251989794,0.325378394664303,4.53380451249978,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0.0890320356467374,4.46269271474641,0.384380134730212,1.65896526242959,0.708104465988849,0,0,0,0.616067160352178,0,0,0,0.286249773483982,0.372158369359667,4.42931194606216,1.14378116354295,0.255897791311334,0,0,0,0,0,0.235624804691373,0.404364963146632,0,0,0,0,0,0,0,0,0,0,2.19225442626881,0,0,0.405820753925408,0,0,0,0,0.35667105148125,0,0,0,0,0,0.48111056362756,1.34060455107157,0,3.01260162485693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.61169982648151,0,0,0.23874448473769,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,1.55519793830904,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0.341380344856499,0.508507300585533,0.236387681767936,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30586246527318,0,0,0,0.0884575645033392,0,0,0,0,0.0674011329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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=207107 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=18383 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=12bp_to_ENST00000446372,NR_027082,uc001ikf.1_5end | |||
|coexpression_cluster_id=C1562 | |||
|description=CAGE_peak_4_at_SFTA1P_5end | |||
|id=chr10:10836846..10836864,- | |||
|ontology_enrichment_celltype=CL:0000077!3.81e-14!19;CL:0000066!1.48e-13!254;CL:0000076!1.40e-11!62;CL:0002368!1.59e-11!13;CL:0002076!3.83e-11!43;CL:0002321!1.37e-10!248;CL:0000220!2.28e-10!246;CL:0002202!3.66e-07!9;CL:0002632!3.66e-07!9;CL:0000223!4.73e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002368;7.74e-10;13!CL:0000077;1.77e-09;19!CL:0000082;9.49e-07;19!CL:0002202;9.75e-07;9!CL:0002632;9.75e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,7.09e-10,13;CL:0000077,2.03e-09,19;CL:0002076,9.72e-09,42;CL:0000066,2.43e-07,253;CL:0000082,9.05e-07,19;CL:0002202,9.54e-07,9;CL:0002632,9.54e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!3.07e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005157!1.56e-09!51;UBERON:0002048!2.58e-07!22;UBERON:0000117!2.58e-07!22;UBERON:0000171!2.58e-07!22;UBERON:0000170!2.58e-07!22;UBERON:0005597!2.58e-07!22;UBERON:0000118!2.58e-07!22;UBERON:0005153!3.58e-07!37;UBERON:0005178!6.30e-07!34;UBERON:0002224!6.30e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0002048;9.53e-13;22!UBERON:0000117;9.53e-13;22!UBERON:0000171;9.53e-13;22!UBERON:0000170;9.53e-13;22!UBERON:0004807;6.56e-10;22!UBERON:0005178;9.98e-09;34!UBERON:0002224;9.98e-09;34!UBERON:0005181;1.55e-07;35!UBERON:0000065;2.47e-07;44!UBERON:0004802;9.49e-07;19!UBERON:0000115;9.49e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,9.08e-13,22;UBERON:0000117,9.08e-13,22;UBERON:0000171,9.08e-13,22;UBERON:0000170,9.08e-13,22;UBERON:0005597,9.08e-13,22;UBERON:0000118,9.08e-13,22;UBERON:0005178,1.90e-09,34;UBERON:0002224,1.90e-09,34;UBERON:0000065,2.73e-09,54;UBERON:0005181,4.02e-09,35;UBERON:0005153,1.11e-08,37;UBERON:0005911,1.86e-08,82;UBERON:0001004,2.52e-08,74;UBERON:0008947,2.98e-08,38;UBERON:0003258,2.98e-08,38;UBERON:0004807,1.47e-07,28;UBERON:0004802,9.05e-07,19;UBERON:0000115,9.05e-07,19;UBERON:0000915,9.14e-07,52 | |||
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|short_description=p4@SFTA1P | |||
}} |
Revision as of 11:37, 10 September 2013
Short description: | p4@SFTA1P |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_SFTA1P_5end |
Coexpression cluster: | C1562_papillary_mesothelioma_oral_mucinous_Multipotent_Smooth_endometrial |
Association with transcript: | 12bp_to_ENST00000446372, NR_027082, uc001ikf.1_5end |
EntrezGene: | SFTA1P |
HGNC: | 18383 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 7.09e-10 | 13 |
mesothelial cell | 2.03e-09 | 19 |
endo-epithelial cell | 9.72e-09 | 42 |
epithelial cell | 2.43e-07 | 253 |
epithelial cell of lung | 9.05e-07 | 19 |
epithelial cell of tracheobronchial tree | 9.54e-07 | 9 |
epithelial cell of lower respiratory tract | 9.54e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
lung | 9.08e-13 | 22 |
respiratory tube | 9.08e-13 | 22 |
respiration organ | 9.08e-13 | 22 |
pair of lungs | 9.08e-13 | 22 |
lung primordium | 9.08e-13 | 22 |
lung bud | 9.08e-13 | 22 |
thoracic cavity element | 1.90e-09 | 34 |
thoracic cavity | 1.90e-09 | 34 |
respiratory tract | 2.73e-09 | 54 |
thoracic segment organ | 4.02e-09 | 35 |
epithelial bud | 1.11e-08 | 37 |
endo-epithelium | 1.86e-08 | 82 |
respiratory system | 2.52e-08 | 74 |
respiratory primordium | 2.98e-08 | 38 |
endoderm of foregut | 2.98e-08 | 38 |
respiratory system epithelium | 1.47e-07 | 28 |
respiratory tract epithelium | 9.05e-07 | 19 |
lung epithelium | 9.05e-07 | 19 |
thoracic segment of trunk | 9.14e-07 | 52 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.