FFCP PHASE1:Hg19::chr10:135267439..135267457,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=S|UniProt=Q4G0T1|association_with_transcript=0bp_to_ENST00000333815,ENST00000463137_5end|coexpression_cluster_id=C74|description=CAGE_peak_1_at_ENST00000333815_5end,CAGE_peak_1_at_ENST00000463137_5end|id=chr10:135267439..135267457,+|ontology_enrichment_celltype=CL:0000838!1.35e-20!52;CL:0000542!4.77e-20!53;CL:0000051!4.77e-20!53;CL:0000037!7.95e-20!172;CL:0000566!7.95e-20!172;CL:0002032!2.97e-18!165;CL:0000837!2.97e-18!165;CL:0000988!7.03e-18!182;CL:0000791!2.67e-16!18;CL:0000789!2.67e-16!18;CL:0002420!2.67e-16!18;CL:0002419!2.67e-16!18;CL:0000790!2.67e-16!18;CL:0000084!7.87e-15!25;CL:0000827!7.87e-15!25;CL:0000738!1.64e-11!140;CL:0000625!9.97e-11!11;CL:0002087!3.05e-09!119;CL:0002031!2.03e-08!124|ontology_enrichment_celltype_v019=CL:0000084;4.09e-22;25!CL:0000791;5.41e-21;18!CL:0000789;5.41e-21;18!CL:0002419;5.41e-21;18!CL:0000542;2.11e-11;53!CL:0000625;2.72e-11;11!CL:0000624;6.90e-08;6!CL:0000623;1.63e-07;3|ontology_enrichment_celltype_v019_2=CL:0000838,1.72e-24,52;CL:0000542,5.89e-24,53;CL:0000051,5.89e-24,53;CL:0000084,3.07e-22,25;CL:0000827,3.07e-22,25;CL:0000791,4.05e-21,18;CL:0000789,4.05e-21,18;CL:0002420,4.05e-21,18;CL:0002419,4.05e-21,18;CL:0000790,4.05e-21,18;CL:0000037,1.54e-17,168;CL:0002032,4.73e-17,161;CL:0000837,4.73e-17,161;CL:0000988,2.41e-16,177;CL:0000625,2.09e-11,11;CL:0000738,2.55e-10,136;CL:0002087,3.90e-10,115;CL:0002031,2.12e-08,120;CL:0000624,6.82e-08,6;CL:0000623,1.74e-07,3;CL:0000825,1.74e-07,3|ontology_enrichment_development_v019=CL:0000790;5.41e-21;18!CL:0000051;2.11e-11;53|ontology_enrichment_disease=DOID:2531!1.68e-14!51;DOID:0060083!1.68e-14!51;DOID:1240!5.05e-12!39;DOID:8692!9.77e-11!31;DOID:1036!1.01e-08!8|ontology_enrichment_disease_v019=DOID:1240;6.49e-12;39!DOID:2531;4.36e-11;51!DOID:0060083;4.36e-11;51!DOID:1036;2.56e-10;8!DOID:8692;4.97e-09;31!DOID:0060058;8.34e-09;10!DOID:630;8.57e-07;1!DOID:0050177;8.57e-07;1!DOID:0050427;8.57e-07;1!DOID:2355;9.29e-07;1|ontology_enrichment_disease_v019_2=DOID:2531,7.42e-17,51;DOID:0060083,7.42e-17,51;DOID:1240,9.50e-14,39;DOID:1036,2.35e-10,8;DOID:8692,2.25e-09,31;DOID:0060058,8.35e-09,10;DOID:630,8.81e-07,1;DOID:0050177,8.81e-07,1;DOID:0050427,8.81e-07,1;DOID:2355,9.30e-07,1|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534893840235659,0.410502947249729,0.393553906568396,1.96682138424452,0,0.464448369948228,0,0,0,0,6.39761546193397,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,1.57367816091066,0,2.67281948699362,0,0,0,0,3.34231370655521,1.17842362989935,0.664601683750863,0,0.768547918354051,2.21100890851793,0,0,0,0,0,0,0.339928028092699,0.383220493601921,2.06176467289578,0.759059076058509,0.318565414324097,0,0,2.71035214339991,1.79181255616186,0,0.473554504088034,0.821127996921047,7.66105624253983,1.60464117470104,4.63438092424957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.6334079244498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528290604079356,0,0.288239906833923,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.48340575974109,2.95546140302891,0.431255149719035,1.02674429023799,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,0.215714200818617,1.06727557803444,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,2.38231775457789,1.23408681925858,0,0.540031437238115,0,0,0,0,0,0,0,0,9.18065108590956,0,3.17510374085824,0,0,0.228234679033192,0,0,0,0,0,0.425846237690326,0,0,0,0,0,2.50565556505718,0,3.51592382018778,0.66614393599564,0,0.748562161632879,0,0,12.7045458076325,0,0,0,0,0,0,0,0,0,0,0,0,0,26.8324875905131,0,0,0,0.511572370226872,0,2.3948309234694,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,8.94787461451641,0.332423363800313,2.03036094555463,1.9606253431774,2.68514539161348,0.75901493089674,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0.802577647298789,0,0.182454789215666,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0.19871461170299,0.126621591911757,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,1.57732412567589,0,0.458320848023367,0,0,0,0,0,0,0,0.315132729228895,0.164831716762333,0.26961417541674,0,14.0557731229202,1.59045937961861,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt=Q4G0T1 | |||
|association_with_transcript=0bp_to_ENST00000333815,ENST00000463137_5end | |||
|coexpression_cluster_id=C74 | |||
|description=CAGE_peak_1_at_ENST00000333815_5end,CAGE_peak_1_at_ENST00000463137_5end | |||
|id=chr10:135267439..135267457,+ | |||
|ontology_enrichment_celltype=CL:0000838!1.35e-20!52;CL:0000542!4.77e-20!53;CL:0000051!4.77e-20!53;CL:0000037!7.95e-20!172;CL:0000566!7.95e-20!172;CL:0002032!2.97e-18!165;CL:0000837!2.97e-18!165;CL:0000988!7.03e-18!182;CL:0000791!2.67e-16!18;CL:0000789!2.67e-16!18;CL:0002420!2.67e-16!18;CL:0002419!2.67e-16!18;CL:0000790!2.67e-16!18;CL:0000084!7.87e-15!25;CL:0000827!7.87e-15!25;CL:0000738!1.64e-11!140;CL:0000625!9.97e-11!11;CL:0002087!3.05e-09!119;CL:0002031!2.03e-08!124 | |||
|ontology_enrichment_celltype_v019=CL:0000084;4.09e-22;25!CL:0000791;5.41e-21;18!CL:0000789;5.41e-21;18!CL:0002419;5.41e-21;18!CL:0000542;2.11e-11;53!CL:0000625;2.72e-11;11!CL:0000624;6.90e-08;6!CL:0000623;1.63e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.72e-24,52;CL:0000542,5.89e-24,53;CL:0000051,5.89e-24,53;CL:0000084,3.07e-22,25;CL:0000827,3.07e-22,25;CL:0000791,4.05e-21,18;CL:0000789,4.05e-21,18;CL:0002420,4.05e-21,18;CL:0002419,4.05e-21,18;CL:0000790,4.05e-21,18;CL:0000037,1.54e-17,168;CL:0002032,4.73e-17,161;CL:0000837,4.73e-17,161;CL:0000988,2.41e-16,177;CL:0000625,2.09e-11,11;CL:0000738,2.55e-10,136;CL:0002087,3.90e-10,115;CL:0002031,2.12e-08,120;CL:0000624,6.82e-08,6;CL:0000623,1.74e-07,3;CL:0000825,1.74e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;5.41e-21;18!CL:0000051;2.11e-11;53 | |||
|ontology_enrichment_disease=DOID:2531!1.68e-14!51;DOID:0060083!1.68e-14!51;DOID:1240!5.05e-12!39;DOID:8692!9.77e-11!31;DOID:1036!1.01e-08!8 | |||
|ontology_enrichment_disease_v019=DOID:1240;6.49e-12;39!DOID:2531;4.36e-11;51!DOID:0060083;4.36e-11;51!DOID:1036;2.56e-10;8!DOID:8692;4.97e-09;31!DOID:0060058;8.34e-09;10!DOID:630;8.57e-07;1!DOID:0050177;8.57e-07;1!DOID:0050427;8.57e-07;1!DOID:2355;9.29e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,7.42e-17,51;DOID:0060083,7.42e-17,51;DOID:1240,9.50e-14,39;DOID:1036,2.35e-10,8;DOID:8692,2.25e-09,31;DOID:0060058,8.35e-09,10;DOID:630,8.81e-07,1;DOID:0050177,8.81e-07,1;DOID:0050427,8.81e-07,1;DOID:2355,9.30e-07,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534893840235659,0.410502947249729,0.393553906568396,1.96682138424452,0,0.464448369948228,0,0,0,0,6.39761546193397,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,1.57367816091066,0,2.67281948699362,0,0,0,0,3.34231370655521,1.17842362989935,0.664601683750863,0,0.768547918354051,2.21100890851793,0,0,0,0,0,0,0.339928028092699,0.383220493601921,2.06176467289578,0.759059076058509,0.318565414324097,0,0,2.71035214339991,1.79181255616186,0,0.473554504088034,0.821127996921047,7.66105624253983,1.60464117470104,4.63438092424957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.6334079244498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528290604079356,0,0.288239906833923,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.48340575974109,2.95546140302891,0.431255149719035,1.02674429023799,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,0.215714200818617,1.06727557803444,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,2.38231775457789,1.23408681925858,0,0.540031437238115,0,0,0,0,0,0,0,0,9.18065108590956,0,3.17510374085824,0,0,0.228234679033192,0,0,0,0,0,0.425846237690326,0,0,0,0,0,2.50565556505718,0,3.51592382018778,0.66614393599564,0,0.748562161632879,0,0,12.7045458076325,0,0,0,0,0,0,0,0,0,0,0,0,0,26.8324875905131,0,0,0,0.511572370226872,0,2.3948309234694,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,8.94787461451641,0.332423363800313,2.03036094555463,1.9606253431774,2.68514539161348,0.75901493089674,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0.802577647298789,0,0.182454789215666,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0.19871461170299,0.126621591911757,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,1.57732412567589,0,0.458320848023367,0,0,0,0,0,0,0,0.315132729228895,0.164831716762333,0.26961417541674,0,14.0557731229202,1.59045937961861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246277562248017,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0.395223263795889,0,0,0,0,0,0,0,0,0,0.751145584238999,0,0.110929051536852,0,0,0,0,0.570930667089935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0362910251936,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0.107824811396682,0,0,0,0,0,0,0,16.7186899402657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80682027481408,0,0,0,0,0,0,0,0.126831620387814,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09940516745429,0,0.154348316215889,0.437119121007915,0,0,0,0,0,0,0,0,0.0644578879735772,58.6654585279333,0,0,0,0.730336388246517,0,0,0,0.0679914901909147,0,1.0580536810308,0,0,0,0.252332849670158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0.0673520530145875,0.143444410785353,0,0,0,0,0,0,0,0,0,0,16.0284246151616 | |||
|short_description=p1@ENST00000333815,p1@ENST00000463137 | |||
}} |
Revision as of 12:30, 10 September 2013
Short description: | p1@ENST00000333815, p1@ENST00000463137 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENST00000333815_5end, CAGE_peak_1_at_ENST00000463137_5end |
Coexpression cluster: | C74_splenic_B_b_plasma_xeroderma_lymphoma_hairy |
Association with transcript: | 0bp_to_ENST00000333815, ENST00000463137_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.72e-24 | 52 |
lymphocyte | 5.89e-24 | 53 |
common lymphoid progenitor | 5.89e-24 | 53 |
T cell | 3.07e-22 | 25 |
pro-T cell | 3.07e-22 | 25 |
mature alpha-beta T cell | 4.05e-21 | 18 |
alpha-beta T cell | 4.05e-21 | 18 |
immature T cell | 4.05e-21 | 18 |
mature T cell | 4.05e-21 | 18 |
immature alpha-beta T cell | 4.05e-21 | 18 |
hematopoietic stem cell | 1.54e-17 | 168 |
hematopoietic oligopotent progenitor cell | 4.73e-17 | 161 |
hematopoietic multipotent progenitor cell | 4.73e-17 | 161 |
hematopoietic cell | 2.41e-16 | 177 |
CD8-positive, alpha-beta T cell | 2.09e-11 | 11 |
leukocyte | 2.55e-10 | 136 |
nongranular leukocyte | 3.90e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 2.12e-08 | 120 |
CD4-positive, alpha-beta T cell | 6.82e-08 | 6 |
natural killer cell | 1.74e-07 | 3 |
pro-NK cell | 1.74e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 7.42e-17 | 51 |
immune system cancer | 7.42e-17 | 51 |
leukemia | 9.50e-14 | 39 |
chronic leukemia | 2.35e-10 | 8 |
myeloid leukemia | 2.25e-09 | 31 |
lymphoma | 8.35e-09 | 10 |
genetic disease | 8.81e-07 | 1 |
monogenic disease | 8.81e-07 | 1 |
xeroderma pigmentosum | 8.81e-07 | 1 |
anemia | 9.30e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.