FFCP PHASE1:Hg19::chr10:17070392..17070407,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C225|description=CAGE_peak_at_chr10:17070392..17070407,-|id=chr10:17070392..17070407,-|ontology_enrichment_celltype=CL:0000080!1.23e-13!6|ontology_enrichment_celltype_v019=CL:0002253;1.27e-17;2!CL:0000083;1.12e-09;4!CL:0002563;1.70e-09;4|ontology_enrichment_celltype_v019_2=CL:0002253,1.27e-17,2;CL:0000083,1.12e-09,4;CL:0002563,1.70e-09,4|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:0060060!7.50e-10!1;DOID:0060061!7.50e-10!1;DOID:8691!7.50e-10!1|ontology_enrichment_disease_v019=DOID:4074;5.48e-18;2!DOID:4905;5.48e-18;2!DOID:3498;5.48e-18;2!DOID:1793;1.12e-09;4!DOID:170;7.17e-07;6|ontology_enrichment_disease_v019_2=DOID:4074,5.48e-18,2;DOID:4905,5.48e-18,2;DOID:3498,5.48e-18,2;DOID:1793,1.12e-09,4;DOID:170,7.17e-07,6|ontology_enrichment_uberon=UBERON:0007190!2.67e-09!1;UBERON:0002331!2.22e-08!10;UBERON:0000358!2.22e-08!10;UBERON:0000307!2.22e-08!10;UBERON:0000091!2.22e-08!10;UBERON:0000087!2.22e-08!10;UBERON:0007806!2.22e-08!10;UBERON:0008780!2.22e-08!10;UBERON:0005728!2.22e-08!10|ontology_enrichment_uberon_v019=UBERON:0002331;2.39e-30;10!UBERON:0000178;1.52e-20;15!UBERON:0000179;1.52e-20;15!UBERON:0000463;1.52e-20;15!UBERON:0000478;3.70e-13;24!UBERON:0002390;3.77e-10;32!UBERON:0001052;1.70e-09;4!UBERON:0001242;1.70e-09;4!UBERON:0001262;1.70e-09;4!UBERON:0004786;1.70e-09;4!UBERON:0004808;1.70e-09;4!UBERON:0001277;1.70e-09;4!UBERON:0004907;7.49e-08;5|ontology_enrichment_uberon_v019_2=UBERON:0002331,2.51e-30,10;UBERON:0000358,2.51e-30,10;UBERON:0000307,2.51e-30,10;UBERON:0000091,2.51e-30,10;UBERON:0000087,2.51e-30,10;UBERON:0007010,2.51e-30,10;UBERON:0007806,2.51e-30,10;UBERON:0008780,2.51e-30,10;UBERON:0005728,2.51e-30,10;UBERON:0000178,1.57e-20,15;UBERON:0000179,1.57e-20,15;UBERON:0000463,1.57e-20,15;UBERON:0000478,3.78e-13,24;UBERON:0001052,1.70e-09,4;UBERON:0001242,1.70e-09,4;UBERON:0001262,1.70e-09,4;UBERON:0004786,1.70e-09,4;UBERON:0004808,1.70e-09,4;UBERON:0001277,1.70e-09,4;UBERON:0004907,7.49e-08,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94749775767882,0,0,0,9.19215498909928,5.31324937469962,3.13265848516366,0,0,0,0,0,35.4459354119775,0,0,0,0,0.150323419414493,0.103688191397247,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248505071130865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39997479170986,0,0,0,0,0,0,0,0,0,0,0,0,0.371807292777007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.13851848493938,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356760272332706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886889507080059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr10:17070392..17070407,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C225 | |||
|description=CAGE_peak_at_chr10:17070392..17070407,- | |||
|id=chr10:17070392..17070407,- | |||
|ontology_enrichment_celltype=CL:0000080!1.23e-13!6 | |||
|ontology_enrichment_celltype_v019=CL:0002253;1.27e-17;2!CL:0000083;1.12e-09;4!CL:0002563;1.70e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,1.27e-17,2;CL:0000083,1.12e-09,4;CL:0002563,1.70e-09,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060060!7.50e-10!1;DOID:0060061!7.50e-10!1;DOID:8691!7.50e-10!1 | |||
|ontology_enrichment_disease_v019=DOID:4074;5.48e-18;2!DOID:4905;5.48e-18;2!DOID:3498;5.48e-18;2!DOID:1793;1.12e-09;4!DOID:170;7.17e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:4074,5.48e-18,2;DOID:4905,5.48e-18,2;DOID:3498,5.48e-18,2;DOID:1793,1.12e-09,4;DOID:170,7.17e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0007190!2.67e-09!1;UBERON:0002331!2.22e-08!10;UBERON:0000358!2.22e-08!10;UBERON:0000307!2.22e-08!10;UBERON:0000091!2.22e-08!10;UBERON:0000087!2.22e-08!10;UBERON:0007806!2.22e-08!10;UBERON:0008780!2.22e-08!10;UBERON:0005728!2.22e-08!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;2.39e-30;10!UBERON:0000178;1.52e-20;15!UBERON:0000179;1.52e-20;15!UBERON:0000463;1.52e-20;15!UBERON:0000478;3.70e-13;24!UBERON:0002390;3.77e-10;32!UBERON:0001052;1.70e-09;4!UBERON:0001242;1.70e-09;4!UBERON:0001262;1.70e-09;4!UBERON:0004786;1.70e-09;4!UBERON:0004808;1.70e-09;4!UBERON:0001277;1.70e-09;4!UBERON:0004907;7.49e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,2.51e-30,10;UBERON:0000358,2.51e-30,10;UBERON:0000307,2.51e-30,10;UBERON:0000091,2.51e-30,10;UBERON:0000087,2.51e-30,10;UBERON:0007010,2.51e-30,10;UBERON:0007806,2.51e-30,10;UBERON:0008780,2.51e-30,10;UBERON:0005728,2.51e-30,10;UBERON:0000178,1.57e-20,15;UBERON:0000179,1.57e-20,15;UBERON:0000463,1.57e-20,15;UBERON:0000478,3.78e-13,24;UBERON:0001052,1.70e-09,4;UBERON:0001242,1.70e-09,4;UBERON:0001262,1.70e-09,4;UBERON:0004786,1.70e-09,4;UBERON:0004808,1.70e-09,4;UBERON:0001277,1.70e-09,4;UBERON:0004907,7.49e-08,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94749775767882,0,0,0,9.19215498909928,5.31324937469962,3.13265848516366,0,0,0,0,0,35.4459354119775,0,0,0,0,0.150323419414493,0.103688191397247,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248505071130865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39997479170986,0,0,0,0,0,0,0,0,0,0,0,0,0.371807292777007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.13851848493938,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356760272332706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886889507080059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:17070392..17070407,- | |||
}} |
Revision as of 12:39, 10 September 2013
Short description: | p@chr10:17070392..17070407, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:17070392..17070407, - |
Coexpression cluster: | C225_ductal_alveolar_giant_prostate_salivary_squamous_Tracheal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 1.27e-17 | 2 |
epithelial cell of pancreas | 1.12e-09 | 4 |
intestinal epithelial cell | 1.70e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 2.51e-30 | 10 |
blastocyst | 2.51e-30 | 10 |
blastula | 2.51e-30 | 10 |
bilaminar disc | 2.51e-30 | 10 |
inner cell mass | 2.51e-30 | 10 |
cleaving embryo | 2.51e-30 | 10 |
connecting stalk | 2.51e-30 | 10 |
inner cell mass derived epiblast | 2.51e-30 | 10 |
extraembryonic mesoderm | 2.51e-30 | 10 |
blood | 1.57e-20 | 15 |
haemolymphatic fluid | 1.57e-20 | 15 |
organism substance | 1.57e-20 | 15 |
extraembryonic structure | 3.78e-13 | 24 |
rectum | 1.70e-09 | 4 |
intestinal mucosa | 1.70e-09 | 4 |
wall of intestine | 1.70e-09 | 4 |
gastrointestinal system mucosa | 1.70e-09 | 4 |
gastrointestinal system epithelium | 1.70e-09 | 4 |
intestinal epithelium | 1.70e-09 | 4 |
lower digestive tract | 7.49e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
pancreas adenocarcinoma | 5.48e-18 | 2 |
pancreatic carcinoma | 5.48e-18 | 2 |
pancreatic ductal adenocarcinoma | 5.48e-18 | 2 |
pancreatic cancer | 1.12e-09 | 4 |
endocrine gland cancer | 7.17e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.