FFCP PHASE1:Hg19::chr11:50257581..50257596,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=441601|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=26bp_to_uc001nhd.2_5end|coexpression_cluster_id=C2135|description=CAGE_peak_3_at_LOC441601_5end|id=chr11:50257581..50257596,-|ontology_enrichment_celltype=CL:0002541!3.84e-13!3;CL:0000039!3.15e-10!7;CL:0000586!3.15e-10!7;CL:0000054!1.67e-09!2;CL:0000137!1.67e-09!2;CL:0000092!1.67e-09!2;CL:0002617!8.27e-09!2|ontology_enrichment_celltype_v019=CL:0000039;7.19e-18;7!CL:0000586;7.19e-18;7!CL:0000054;6.80e-08;2!CL:0000137;6.80e-08;2!CL:0000092;6.80e-08;2|ontology_enrichment_celltype_v019_2=CL:0000039,7.84e-18,7;CL:0000586,7.84e-18,7;CL:0000054,5.37e-08,2;CL:0000137,5.37e-08,2;CL:0000092,5.37e-08,2|ontology_enrichment_development_v019=UBERON:0003124;1.72e-14;1!UBERON:0009117;1.07e-12;10!UBERON:0005564;1.07e-12;10|ontology_enrichment_disease=DOID:200!1.67e-09!2;DOID:4305!1.67e-09!2;DOID:1036!1.01e-08!8|ontology_enrichment_disease_v019=DOID:0060085;1.72e-14;1!DOID:3165;1.72e-14;1!DOID:0060121;1.72e-14;1!DOID:2438;1.72e-14;1!DOID:4418;1.72e-14;1!DOID:3095;5.44e-10;22!DOID:2994;5.44e-10;22!DOID:200;6.80e-08;2!DOID:4305;6.80e-08;2!DOID:1036;1.65e-07;8|ontology_enrichment_disease_v019_2=DOID:0060085,1.07e-14,1;DOID:3165,1.07e-14,1;DOID:0060121,1.07e-14,1;DOID:2438,1.07e-14,1;DOID:4418,1.07e-14,1;DOID:3095,5.98e-10,22;DOID:2994,5.98e-10,22;DOID:200,5.37e-08,2;DOID:4305,5.37e-08,2;DOID:1036,1.82e-07,8|ontology_enrichment_uberon=UBERON:0000476!3.84e-13!3;UBERON:0000920!3.84e-13!3;UBERON:0003124!7.96e-10!7;UBERON:0003135!1.47e-09!11;UBERON:0000473!5.51e-09!8;UBERON:0005631!3.30e-07!14;UBERON:0000158!3.30e-07!14|ontology_enrichment_uberon_v019=UBERON:0000473;1.02e-15;8!UBERON:0001282;5.42e-15;1!UBERON:0009842;5.42e-15;1!UBERON:0003704;5.42e-15;1!UBERON:0001171;5.42e-15;1!UBERON:0001172;5.42e-15;1!UBERON:0007195;7.12e-15;1!UBERON:0003135;1.34e-11;11|ontology_enrichment_uberon_v019_2=UBERON:0000473,8.14e-16,8;UBERON:0001282,5.42e-15,1;UBERON:0009842,5.42e-15,1;UBERON:0003704,5.42e-15,1;UBERON:0001171,5.42e-15,1;UBERON:0001172,5.42e-15,1;UBERON:0007195,7.13e-15,1;UBERON:0003135,1.14e-11,11;UBERON:0003124,2.07e-08,7;UBERON:0003133,5.80e-07,48|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0.372158369359667,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.33410970433911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.35527662480906,1.38338342632836,0,0.977826347298073,0.31900115973192,0.732780747214898,1.06606955203727,0,0,0,0.902382642468723,0.784250137270958,1.00692952185506,1.51802986179348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,1.58971689362392,0,0,0.320635281006135,0.213452994739353,1.39866726707491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591420599958536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0,1.50794029276486,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,4.2109103423179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,1.14028650910293,0,0,2.94063678511504,6.016980943017,0.833565680400634,1.60778478093707,0,0,0,0,0,0,1.56984607612859,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p3@LOC441601}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=441601 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=26bp_to_uc001nhd.2_5end | |||
|coexpression_cluster_id=C2135 | |||
|description=CAGE_peak_3_at_LOC441601_5end | |||
|id=chr11:50257581..50257596,- | |||
|ontology_enrichment_celltype=CL:0002541!3.84e-13!3;CL:0000039!3.15e-10!7;CL:0000586!3.15e-10!7;CL:0000054!1.67e-09!2;CL:0000137!1.67e-09!2;CL:0000092!1.67e-09!2;CL:0002617!8.27e-09!2 | |||
|ontology_enrichment_celltype_v019=CL:0000039;7.19e-18;7!CL:0000586;7.19e-18;7!CL:0000054;6.80e-08;2!CL:0000137;6.80e-08;2!CL:0000092;6.80e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,7.84e-18,7;CL:0000586,7.84e-18,7;CL:0000054,5.37e-08,2;CL:0000137,5.37e-08,2;CL:0000092,5.37e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.72e-14;1!UBERON:0009117;1.07e-12;10!UBERON:0005564;1.07e-12;10 | |||
|ontology_enrichment_disease=DOID:200!1.67e-09!2;DOID:4305!1.67e-09!2;DOID:1036!1.01e-08!8 | |||
|ontology_enrichment_disease_v019=DOID:0060085;1.72e-14;1!DOID:3165;1.72e-14;1!DOID:0060121;1.72e-14;1!DOID:2438;1.72e-14;1!DOID:4418;1.72e-14;1!DOID:3095;5.44e-10;22!DOID:2994;5.44e-10;22!DOID:200;6.80e-08;2!DOID:4305;6.80e-08;2!DOID:1036;1.65e-07;8 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,1.07e-14,1;DOID:3165,1.07e-14,1;DOID:0060121,1.07e-14,1;DOID:2438,1.07e-14,1;DOID:4418,1.07e-14,1;DOID:3095,5.98e-10,22;DOID:2994,5.98e-10,22;DOID:200,5.37e-08,2;DOID:4305,5.37e-08,2;DOID:1036,1.82e-07,8 | |||
|ontology_enrichment_uberon=UBERON:0000476!3.84e-13!3;UBERON:0000920!3.84e-13!3;UBERON:0003124!7.96e-10!7;UBERON:0003135!1.47e-09!11;UBERON:0000473!5.51e-09!8;UBERON:0005631!3.30e-07!14;UBERON:0000158!3.30e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.02e-15;8!UBERON:0001282;5.42e-15;1!UBERON:0009842;5.42e-15;1!UBERON:0003704;5.42e-15;1!UBERON:0001171;5.42e-15;1!UBERON:0001172;5.42e-15;1!UBERON:0007195;7.12e-15;1!UBERON:0003135;1.34e-11;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,8.14e-16,8;UBERON:0001282,5.42e-15,1;UBERON:0009842,5.42e-15,1;UBERON:0003704,5.42e-15,1;UBERON:0001171,5.42e-15,1;UBERON:0001172,5.42e-15,1;UBERON:0007195,7.13e-15,1;UBERON:0003135,1.14e-11,11;UBERON:0003124,2.07e-08,7;UBERON:0003133,5.80e-07,48 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0.372158369359667,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.33410970433911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.35527662480906,1.38338342632836,0,0.977826347298073,0.31900115973192,0.732780747214898,1.06606955203727,0,0,0,0.902382642468723,0.784250137270958,1.00692952185506,1.51802986179348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,1.58971689362392,0,0,0.320635281006135,0.213452994739353,1.39866726707491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591420599958536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0,1.50794029276486,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,4.2109103423179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,1.14028650910293,0,0,2.94063678511504,6.016980943017,0.833565680400634,1.60778478093707,0,0,0,0,0,0,1.56984607612859,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@LOC441601 | |||
}} |
Revision as of 18:04, 10 September 2013
Short description: | p3@LOC441601 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_LOC441601_5end |
Coexpression cluster: | C2135_testis_testicular_small_cholangiocellular_fibrous_chronic_thyroid |
Association with transcript: | 26bp_to_uc001nhd.2_5end |
EntrezGene: | LOC441601 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 7.84e-18 | 7 |
germ cell | 7.84e-18 | 7 |
bone matrix secreting cell | 5.37e-08 | 2 |
osteocyte | 5.37e-08 | 2 |
osteoclast | 5.37e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
testis | 8.14e-16 | 8 |
intralobular bile duct | 5.42e-15 | 1 |
acinus | 5.42e-15 | 1 |
intrahepatic bile duct | 5.42e-15 | 1 |
portal lobule | 5.42e-15 | 1 |
hepatic acinus | 5.42e-15 | 1 |
stroma of bone marrow | 7.13e-15 | 1 |
male reproductive organ | 1.14e-11 | 11 |
chorion | 2.07e-08 | 7 |
reproductive organ | 5.80e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 1.07e-14 | 1 |
skin benign neoplasm | 1.07e-14 | 1 |
integumentary system benign neoplasm | 1.07e-14 | 1 |
dermis tumor | 1.07e-14 | 1 |
cutaneous fibrous histiocytoma | 1.07e-14 | 1 |
germ cell and embryonal cancer | 5.98e-10 | 22 |
germ cell cancer | 5.98e-10 | 22 |
giant cell tumor | 5.37e-08 | 2 |
bone giant cell tumor | 5.37e-08 | 2 |
chronic leukemia | 1.82e-07 | 8 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.