FFCP PHASE1:Hg19::chr11:5949806..5949843,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:5949806..5949843,+|id=chr11:5949806..5949843,+|ontology_enrichment_celltype=CL:1000415!9.25e-08!2;CL:0000242!1.20e-07!2;CL:0000054!1.36e-07!2;CL:0000137!1.36e-07!2;CL:0000092!1.36e-07!2|ontology_enrichment_celltype_v019=CL:1000415;1.15e-15;2!CL:0000123;2.05e-15;2!CL:0000242;2.05e-15;2!CL:0000054;2.74e-15;2!CL:0000137;2.74e-15;2!CL:0000092;2.74e-15;2!CL:0000322;7.42e-11;3!CL:0000312;6.04e-07;5|ontology_enrichment_celltype_v019_2=CL:1000415,1.15e-15,2;CL:0000242,2.05e-15,2;CL:0000054,2.74e-15,2;CL:0000137,2.74e-15,2;CL:0000092,2.74e-15,2;CL:0000322,7.42e-11,3;CL:0000312,6.04e-07,5|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:0060085!6.65e-14!1;DOID:3165!6.65e-14!1;DOID:0060121!6.65e-14!1;DOID:2438!6.65e-14!1;DOID:4418!6.65e-14!1;DOID:305!1.46e-08!106;DOID:1325!3.84e-08!7;DOID:3904!3.84e-08!7;DOID:3910!9.87e-08!2;DOID:200!1.36e-07!2;DOID:4305!1.36e-07!2;DOID:162!2.93e-07!235;DOID:14566!4.51e-07!239|ontology_enrichment_disease_v019=DOID:0060085;4.20e-29;1!DOID:3165;4.20e-29;1!DOID:0060121;4.20e-29;1!DOID:2438;4.20e-29;1!DOID:4418;4.20e-29;1!DOID:3910;1.33e-15;2!DOID:200;2.74e-15;2!DOID:4305;2.74e-15;2!DOID:0060072;2.61e-08;4!DOID:3908;5.08e-07;5|ontology_enrichment_disease_v019_2=DOID:0060085,4.20e-29,1;DOID:3165,4.20e-29,1;DOID:0060121,4.20e-29,1;DOID:2438,4.20e-29,1;DOID:4418,4.20e-29,1;DOID:3910,1.33e-15,2;DOID:200,2.74e-15,2;DOID:4305,2.74e-15,2;DOID:0060072,2.61e-08,4;DOID:3908,5.08e-07,5;DOID:305,5.13e-07,106|ontology_enrichment_uberon=UBERON:0001282!8.58e-14!1;UBERON:0009842!8.58e-14!1;UBERON:0003704!8.58e-14!1;UBERON:0001171!8.58e-14!1;UBERON:0001172!8.58e-14!1;UBERON:0001000!1.10e-13!1;UBERON:0005352!1.10e-13!1;UBERON:0002294!3.57e-08!7;UBERON:0001173!3.57e-08!7;UBERON:0004912!3.57e-08!7;UBERON:0004903!9.87e-08!2;UBERON:0002173!9.87e-08!2;UBERON:0002186!9.87e-08!2|ontology_enrichment_uberon_v019=UBERON:0004903;1.33e-15;2!UBERON:0002173;1.33e-15;2!UBERON:0002186;1.33e-15;2!UBERON:0002110;6.73e-11;3!UBERON:0004821;7.42e-11;3!UBERON:0007499;7.42e-11;3!UBERON:0003215;7.42e-11;3!UBERON:0010368;7.42e-11;3!UBERON:0009911;7.42e-11;3!UBERON:0002299;7.42e-11;3!UBERON:0006524;7.42e-11;3!UBERON:0008874;7.42e-11;3!UBERON:0002169;7.42e-11;3!UBERON:0004894;7.42e-11;3!UBERON:0009856;1.82e-08;4!UBERON:0000014;2.61e-08;4|ontology_enrichment_uberon_v019_2=UBERON:0004903,1.33e-15,2;UBERON:0002173,1.33e-15,2;UBERON:0002186,1.33e-15,2;UBERON:0002110,6.73e-11,3;UBERON:0006242,6.73e-11,3;UBERON:0004821,7.42e-11,3;UBERON:0003215,7.42e-11,3;UBERON:0010368,7.42e-11,3;UBERON:0009911,7.42e-11,3;UBERON:0002299,7.42e-11,3;UBERON:0006524,7.42e-11,3;UBERON:0008874,7.42e-11,3;UBERON:0002169,7.42e-11,3;UBERON:0004894,7.42e-11,3;UBERON:0000014,2.61e-08,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.3908847515827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,8.98274593959455,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.66163871112512,0,0,0,0,0,0,0,0,0,0,0,0,0,0.455768223388005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9871461170299,0,11.1464288158838,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.17372795087739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.91286777249228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691259661814092,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0.452888530700021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr11:5949806..5949843,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:5949806..5949843,+ | |||
|id=chr11:5949806..5949843,+ | |||
|ontology_enrichment_celltype=CL:1000415!9.25e-08!2;CL:0000242!1.20e-07!2;CL:0000054!1.36e-07!2;CL:0000137!1.36e-07!2;CL:0000092!1.36e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:1000415;1.15e-15;2!CL:0000123;2.05e-15;2!CL:0000242;2.05e-15;2!CL:0000054;2.74e-15;2!CL:0000137;2.74e-15;2!CL:0000092;2.74e-15;2!CL:0000322;7.42e-11;3!CL:0000312;6.04e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,1.15e-15,2;CL:0000242,2.05e-15,2;CL:0000054,2.74e-15,2;CL:0000137,2.74e-15,2;CL:0000092,2.74e-15,2;CL:0000322,7.42e-11,3;CL:0000312,6.04e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060085!6.65e-14!1;DOID:3165!6.65e-14!1;DOID:0060121!6.65e-14!1;DOID:2438!6.65e-14!1;DOID:4418!6.65e-14!1;DOID:305!1.46e-08!106;DOID:1325!3.84e-08!7;DOID:3904!3.84e-08!7;DOID:3910!9.87e-08!2;DOID:200!1.36e-07!2;DOID:4305!1.36e-07!2;DOID:162!2.93e-07!235;DOID:14566!4.51e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:0060085;4.20e-29;1!DOID:3165;4.20e-29;1!DOID:0060121;4.20e-29;1!DOID:2438;4.20e-29;1!DOID:4418;4.20e-29;1!DOID:3910;1.33e-15;2!DOID:200;2.74e-15;2!DOID:4305;2.74e-15;2!DOID:0060072;2.61e-08;4!DOID:3908;5.08e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,4.20e-29,1;DOID:3165,4.20e-29,1;DOID:0060121,4.20e-29,1;DOID:2438,4.20e-29,1;DOID:4418,4.20e-29,1;DOID:3910,1.33e-15,2;DOID:200,2.74e-15,2;DOID:4305,2.74e-15,2;DOID:0060072,2.61e-08,4;DOID:3908,5.08e-07,5;DOID:305,5.13e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0001282!8.58e-14!1;UBERON:0009842!8.58e-14!1;UBERON:0003704!8.58e-14!1;UBERON:0001171!8.58e-14!1;UBERON:0001172!8.58e-14!1;UBERON:0001000!1.10e-13!1;UBERON:0005352!1.10e-13!1;UBERON:0002294!3.57e-08!7;UBERON:0001173!3.57e-08!7;UBERON:0004912!3.57e-08!7;UBERON:0004903!9.87e-08!2;UBERON:0002173!9.87e-08!2;UBERON:0002186!9.87e-08!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;1.33e-15;2!UBERON:0002173;1.33e-15;2!UBERON:0002186;1.33e-15;2!UBERON:0002110;6.73e-11;3!UBERON:0004821;7.42e-11;3!UBERON:0007499;7.42e-11;3!UBERON:0003215;7.42e-11;3!UBERON:0010368;7.42e-11;3!UBERON:0009911;7.42e-11;3!UBERON:0002299;7.42e-11;3!UBERON:0006524;7.42e-11;3!UBERON:0008874;7.42e-11;3!UBERON:0002169;7.42e-11;3!UBERON:0004894;7.42e-11;3!UBERON:0009856;1.82e-08;4!UBERON:0000014;2.61e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,1.33e-15,2;UBERON:0002173,1.33e-15,2;UBERON:0002186,1.33e-15,2;UBERON:0002110,6.73e-11,3;UBERON:0006242,6.73e-11,3;UBERON:0004821,7.42e-11,3;UBERON:0003215,7.42e-11,3;UBERON:0010368,7.42e-11,3;UBERON:0009911,7.42e-11,3;UBERON:0002299,7.42e-11,3;UBERON:0006524,7.42e-11,3;UBERON:0008874,7.42e-11,3;UBERON:0002169,7.42e-11,3;UBERON:0004894,7.42e-11,3;UBERON:0000014,2.61e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.3908847515827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,8.98274593959455,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.66163871112512,0,0,0,0,0,0,0,0,0,0,0,0,0,0.455768223388005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9871461170299,0,11.1464288158838,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.17372795087739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.91286777249228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691259661814092,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0.452888530700021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:5949806..5949843,+ | |||
}} |
Revision as of 18:16, 10 September 2013
Short description: | p@chr11:5949806..5949843, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:5949806..5949843, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 1.15e-15 | 2 |
Merkel cell | 2.05e-15 | 2 |
bone matrix secreting cell | 2.74e-15 | 2 |
osteocyte | 2.74e-15 | 2 |
osteoclast | 2.74e-15 | 2 |
pneumocyte | 7.42e-11 | 3 |
keratinocyte | 6.04e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 1.33e-15 | 2 |
alveolar duct | 1.33e-15 | 2 |
bronchiole | 1.33e-15 | 2 |
gallbladder | 6.73e-11 | 3 |
gall bladder primordium | 6.73e-11 | 3 |
pulmonary alveolus epithelium | 7.42e-11 | 3 |
alveolus | 7.42e-11 | 3 |
pulmonary lobule | 7.42e-11 | 3 |
lobule | 7.42e-11 | 3 |
alveolus of lung | 7.42e-11 | 3 |
alveolar system | 7.42e-11 | 3 |
pulmonary acinus | 7.42e-11 | 3 |
alveolar sac | 7.42e-11 | 3 |
alveolar wall | 7.42e-11 | 3 |
zone of skin | 2.61e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 4.20e-29 | 1 |
skin benign neoplasm | 4.20e-29 | 1 |
integumentary system benign neoplasm | 4.20e-29 | 1 |
dermis tumor | 4.20e-29 | 1 |
cutaneous fibrous histiocytoma | 4.20e-29 | 1 |
lung adenocarcinoma | 1.33e-15 | 2 |
giant cell tumor | 2.74e-15 | 2 |
bone giant cell tumor | 2.74e-15 | 2 |
benign neoplasm | 2.61e-08 | 4 |
non-small cell lung carcinoma | 5.08e-07 | 5 |
carcinoma | 5.13e-07 | 106 |
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