FFCP PHASE1:Hg19::chr11:65337923..65337959,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10534 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11328 | |||
|TSSclassifier=S | |||
|UniProt=E9PK41,E9PN57,G3V1B8,O60232 | |||
|association_with_transcript=0bp_to_ENST00000526877,ENST00000527920,ENST00000531405,NM_006396,uc001oek.2_5end | |||
|description=CAGE_peak_1_at_SSSCA1_5end | |||
|id=chr11:65337923..65337959,+ | |||
|ontology_enrichment_celltype=CL:0000012!8.43e-32!682;CL:0000548!1.71e-31!679;CL:0000004!1.71e-31!679;CL:0000255!1.71e-31!679;CL:0000220!1.25e-22!246;CL:0002321!1.69e-22!248;CL:0000144!2.55e-20!625;CL:0000003!8.37e-20!722;CL:0000066!1.15e-18!254;CL:0002371!9.89e-16!591;CL:0000222!9.73e-15!119;CL:0000055!2.44e-14!180;CL:0000183!1.63e-12!59;CL:0000393!9.18e-11!60;CL:0000211!9.18e-11!60;CL:0000192!1.78e-10!42;CL:0000514!1.78e-10!42;CL:0000187!2.15e-10!54;CL:0000076!2.98e-10!62;CL:0000680!4.96e-10!57;CL:0000056!4.96e-10!57;CL:0000355!4.96e-10!57;CL:0000063!7.07e-10!578;CL:0000359!1.76e-09!32;CL:1000497!4.37e-07!18;CL:0002518!4.37e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000359;5.02e-09;32!CL:1000497;6.04e-08;17!CL:0002518;6.04e-08;17!CL:0000192;2.66e-07;43!CL:1000449;3.05e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.68e-22,250;CL:0000066,5.49e-19,253;CL:0000222,1.15e-14,121;CL:0000393,2.90e-10,61;CL:0000211,2.90e-10,61;CL:0000076,6.28e-10,63;CL:0000187,7.13e-10,55;CL:0000192,7.27e-10,43;CL:0000514,7.27e-10,43;CL:0000680,1.53e-09,58;CL:0000056,1.53e-09,58;CL:0000355,1.53e-09,58;CL:0000359,1.76e-09,32;CL:1000497,5.84e-08,17;CL:0002518,5.84e-08,17;CL:1000449,2.94e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000514;2.66e-07;43 | |||
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|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p1@SSSCA1 | |||
}} |
Revision as of 18:59, 10 September 2013
Short description: | p1@SSSCA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_SSSCA1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000526877, ENST00000527920, ENST00000531405, NM_006396, uc001oek.2_5end |
EntrezGene: | SSSCA1 |
HGNC: | 11328 |
UniProt: | E9PK41E9PN57G3V1B8O60232 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.68e-22 | 250 |
epithelial cell | 5.49e-19 | 253 |
mesodermal cell | 1.15e-14 | 121 |
electrically responsive cell | 2.90e-10 | 61 |
electrically active cell | 2.90e-10 | 61 |
squamous epithelial cell | 6.28e-10 | 63 |
muscle cell | 7.13e-10 | 55 |
smooth muscle cell | 7.27e-10 | 43 |
smooth muscle myoblast | 7.27e-10 | 43 |
muscle precursor cell | 1.53e-09 | 58 |
myoblast | 1.53e-09 | 58 |
multi-potent skeletal muscle stem cell | 1.53e-09 | 58 |
vascular associated smooth muscle cell | 1.76e-09 | 32 |
kidney cell | 5.84e-08 | 17 |
kidney epithelial cell | 5.84e-08 | 17 |
epithelial cell of nephron | 2.94e-07 | 15 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.