FFCP PHASE1:Hg19::chr11:68816541..68816554,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=219931|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=20820|TSSclassifier=S|UniProt=|association_with_transcript=43bp_to_ENST00000534832_5end|coexpression_cluster_id=C58|description=CAGE_peak_4_at_TPCN2_5end|id=chr11:68816541..68816554,+|ontology_enrichment_celltype=CL:0002057!4.78e-37!42;CL:0000860!2.51e-33!45;CL:0000766!2.18e-27!76;CL:0002194!2.79e-26!63;CL:0000576!2.79e-26!63;CL:0000040!2.79e-26!63;CL:0000559!2.79e-26!63;CL:0000839!2.36e-25!70;CL:0002009!6.93e-25!65;CL:0000557!1.02e-24!71;CL:0000763!1.93e-16!112;CL:0000049!1.93e-16!112;CL:0000738!4.30e-12!140;CL:0002087!1.11e-11!119;CL:0002031!1.79e-10!124;CL:0002393!3.64e-10!9;CL:0002397!3.64e-10!9;CL:0000148!4.73e-10!10;CL:0000541!4.73e-10!10;CL:0000037!1.56e-08!172;CL:0000566!1.56e-08!172;CL:0000988!1.79e-08!182;CL:0002032!3.05e-08!165;CL:0000837!3.05e-08!165;CL:0000219!5.57e-07!390|ontology_enrichment_celltype_v019=CL:0002393;2.23e-29;6!CL:0002397;2.23e-29;6!CL:0000860;1.19e-27;33!CL:0002057;1.19e-27;33!CL:0000576;8.38e-26;48!CL:0000473;9.20e-26;39!CL:0000234;9.20e-26;39!CL:0000148;3.19e-25;10!CL:0000766;2.39e-22;69!CL:0000147;9.79e-18;14!CL:0002567;1.24e-16;3!CL:0000710;4.10e-12;20!CL:0000075;3.61e-11;27!CL:0000771;6.73e-11;2!CL:0000763;4.34e-09;100|ontology_enrichment_celltype_v019_2=CL:0000473,2.69e-53,48;CL:0000234,2.69e-53,48;CL:0000860,2.58e-51,42;CL:0002057,2.58e-51,42;CL:0000766,3.21e-46,72;CL:0002194,1.51e-41,59;CL:0000576,1.51e-41,59;CL:0000040,1.51e-41,59;CL:0000559,1.51e-41,59;CL:0002009,4.94e-40,61;CL:0000839,6.74e-40,66;CL:0000557,3.15e-39,67;CL:0000763,6.41e-29,108;CL:0000049,6.41e-29,108;CL:0002393,2.74e-26,9;CL:0002397,2.74e-26,9;CL:0000148,3.21e-25,10;CL:0000541,3.21e-25,10;CL:0000738,9.49e-22,136;CL:0002031,1.40e-19,120;CL:0002087,7.23e-19,115;CL:0000147,9.82e-18,14;CL:0002032,1.92e-17,161;CL:0000837,1.92e-17,161;CL:0002567,1.24e-16,3;CL:0000037,1.82e-16,168;CL:0000988,2.52e-15,177;CL:0000710,4.11e-12,20;CL:0000075,3.78e-11,27;CL:0000771,6.11e-11,2;CL:0000219,3.61e-10,386|ontology_enrichment_development_v019=CL:0002057;3.98e-37;42!CL:0000049;3.37e-09;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!1.13e-20!80;UBERON:0001474!5.85e-20!86;UBERON:0002390!2.91e-18!102;UBERON:0003061!2.91e-18!102;UBERON:0002193!3.98e-18!112;UBERON:0004765!2.85e-17!101;UBERON:0001434!2.85e-17!101;UBERON:0002405!1.12e-15!115;UBERON:0002204!1.35e-10!167;UBERON:0003081!3.28e-08!216|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.53e-34,76;UBERON:0001474,5.61e-34,82;UBERON:0004765,1.77e-30,90;UBERON:0001434,6.96e-27,100;UBERON:0002405,8.08e-27,93;UBERON:0002390,3.52e-25,98;UBERON:0003061,3.52e-25,98;UBERON:0002193,2.35e-22,108;UBERON:0002204,1.32e-16,167;UBERON:0003081,2.14e-10,203|phase1_expression=0.363356758541113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.547497700291537,0,0,0,0.0787107813136792,0.786728553697808,0,1.08371286321253,0,0,0,0,0,0,3.32397245119126,1.40381113229099,1.51907609501096,0,0,0,0.726991193897824,0.755751887377619,0.727752183563449,1.16214518452842,4.11167888021826,2.78735733805593,0.28769239232215,1.0246428261164,2.12834006899727,1.37898272294647,1.93645405075148,4.06279459783025,0.941211697713023,0.818718450173537,2.02251136000576,1.22433556948361,0.962787081228281,1.27867425159808,0.329851300186716,0.997318288108159,0.852449501065388,0.290209238628584,0.56738522469114,0,1.00499466102697,1.5644487552606,0.868755378820466,0.605399502633369,1.10483290796269,0.316462387440884,3.80259515361495,2.12604299965044,2.09658645508376,2.3589012540764,0.901061357049038,0.64290234678832,1.71007646244749,0.79566670879636,0.730656615058536,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0.263384084775077,0,0,0.205601498999509,0,0.32592226663359,0,0,0,0,0,0,0,0,0.164437904603676,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0.361439152384566,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.130979075497713,0,0,0,0,0.398873881556595,0,0,0,0,0.860234595106124,0.347140501607594,0,0.419499436209906,0,0,0,0.35576626268671,0,0.402829317109147,0,0.24406205754817,0.367663080345869,0,0,0.22452937262617,0,0,0,0,1.31780417436063,3.87780264148325,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0.149448680551801,0.23486899728753,0,0,0,0,0.103325781175765,0,0.247266929278557,0.910161361938026,0,0,0.125118519871964,0,0.438977620880838,0,0.150238058906597,0,0.179389635688862,0.213557388818567,0,0.300091096084402,0.103052529238439,0,0,0.168776332241266,0.0974370051611986,0.252433774244115,0,0.484938170456436,0,0.10075209822764,0,0,0,0,0,0,0.116193942869518,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0.246217006087397,0.468008530278475,0.445893486866185,0,0,0,0,0,0,0,0.088048434013226,0,0.432359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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=219931 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20820 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=43bp_to_ENST00000534832_5end | |||
|coexpression_cluster_id=C58 | |||
|description=CAGE_peak_4_at_TPCN2_5end | |||
|id=chr11:68816541..68816554,+ | |||
|ontology_enrichment_celltype=CL:0002057!4.78e-37!42;CL:0000860!2.51e-33!45;CL:0000766!2.18e-27!76;CL:0002194!2.79e-26!63;CL:0000576!2.79e-26!63;CL:0000040!2.79e-26!63;CL:0000559!2.79e-26!63;CL:0000839!2.36e-25!70;CL:0002009!6.93e-25!65;CL:0000557!1.02e-24!71;CL:0000763!1.93e-16!112;CL:0000049!1.93e-16!112;CL:0000738!4.30e-12!140;CL:0002087!1.11e-11!119;CL:0002031!1.79e-10!124;CL:0002393!3.64e-10!9;CL:0002397!3.64e-10!9;CL:0000148!4.73e-10!10;CL:0000541!4.73e-10!10;CL:0000037!1.56e-08!172;CL:0000566!1.56e-08!172;CL:0000988!1.79e-08!182;CL:0002032!3.05e-08!165;CL:0000837!3.05e-08!165;CL:0000219!5.57e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0002393;2.23e-29;6!CL:0002397;2.23e-29;6!CL:0000860;1.19e-27;33!CL:0002057;1.19e-27;33!CL:0000576;8.38e-26;48!CL:0000473;9.20e-26;39!CL:0000234;9.20e-26;39!CL:0000148;3.19e-25;10!CL:0000766;2.39e-22;69!CL:0000147;9.79e-18;14!CL:0002567;1.24e-16;3!CL:0000710;4.10e-12;20!CL:0000075;3.61e-11;27!CL:0000771;6.73e-11;2!CL:0000763;4.34e-09;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.69e-53,48;CL:0000234,2.69e-53,48;CL:0000860,2.58e-51,42;CL:0002057,2.58e-51,42;CL:0000766,3.21e-46,72;CL:0002194,1.51e-41,59;CL:0000576,1.51e-41,59;CL:0000040,1.51e-41,59;CL:0000559,1.51e-41,59;CL:0002009,4.94e-40,61;CL:0000839,6.74e-40,66;CL:0000557,3.15e-39,67;CL:0000763,6.41e-29,108;CL:0000049,6.41e-29,108;CL:0002393,2.74e-26,9;CL:0002397,2.74e-26,9;CL:0000148,3.21e-25,10;CL:0000541,3.21e-25,10;CL:0000738,9.49e-22,136;CL:0002031,1.40e-19,120;CL:0002087,7.23e-19,115;CL:0000147,9.82e-18,14;CL:0002032,1.92e-17,161;CL:0000837,1.92e-17,161;CL:0002567,1.24e-16,3;CL:0000037,1.82e-16,168;CL:0000988,2.52e-15,177;CL:0000710,4.11e-12,20;CL:0000075,3.78e-11,27;CL:0000771,6.11e-11,2;CL:0000219,3.61e-10,386 | |||
|ontology_enrichment_development_v019=CL:0002057;3.98e-37;42!CL:0000049;3.37e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.13e-20!80;UBERON:0001474!5.85e-20!86;UBERON:0002390!2.91e-18!102;UBERON:0003061!2.91e-18!102;UBERON:0002193!3.98e-18!112;UBERON:0004765!2.85e-17!101;UBERON:0001434!2.85e-17!101;UBERON:0002405!1.12e-15!115;UBERON:0002204!1.35e-10!167;UBERON:0003081!3.28e-08!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.53e-34,76;UBERON:0001474,5.61e-34,82;UBERON:0004765,1.77e-30,90;UBERON:0001434,6.96e-27,100;UBERON:0002405,8.08e-27,93;UBERON:0002390,3.52e-25,98;UBERON:0003061,3.52e-25,98;UBERON:0002193,2.35e-22,108;UBERON:0002204,1.32e-16,167;UBERON:0003081,2.14e-10,203 | |||
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| |||
|short_description=p4@TPCN2 | |||
}} |
Revision as of 19:21, 10 September 2013
Short description: | p4@TPCN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_TPCN2_5end |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | 43bp_to_ENST00000534832_5end |
EntrezGene: | TPCN2 |
HGNC: | 20820 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.53e-34 | 76 |
bone element | 5.61e-34 | 82 |
skeletal element | 1.77e-30 | 90 |
skeletal system | 6.96e-27 | 100 |
immune system | 8.08e-27 | 93 |
hematopoietic system | 3.52e-25 | 98 |
blood island | 3.52e-25 | 98 |
hemolymphoid system | 2.35e-22 | 108 |
musculoskeletal system | 1.32e-16 | 167 |
lateral plate mesoderm | 2.14e-10 | 203 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.