FFCP PHASE1:Hg19::chr11:71752221..71752232,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4926|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=8059|TSSclassifier=S|UniProt=F5H4J1|association_with_transcript=-38bp_to_ENST00000542977_5end|coexpression_cluster_id=C47|description=CAGE_peak_14_at_NUMA1_5end|id=chr11:71752221..71752232,-|ontology_enrichment_celltype=CL:0000542!1.45e-13!53;CL:0000051!1.45e-13!53;CL:0000838!6.04e-13!52;CL:0000236!1.00e-09!14;CL:0000945!3.48e-09!24;CL:0000826!3.48e-09!24;CL:0000791!8.84e-07!18;CL:0000789!8.84e-07!18;CL:0002420!8.84e-07!18;CL:0002419!8.84e-07!18;CL:0000790!8.84e-07!18|ontology_enrichment_celltype_v019=CL:0000236;2.19e-30;13!CL:0000945;2.92e-15;24!CL:0000542;5.34e-15;53!CL:0000791;6.82e-13;18!CL:0000789;6.82e-13;18!CL:0002419;6.82e-13;18!CL:0000084;7.46e-11;25!CL:0000625;4.45e-10;11|ontology_enrichment_celltype_v019_2=CL:0000236,2.34e-28,14;CL:0000542,7.70e-25,53;CL:0000051,7.70e-25,53;CL:0000838,6.40e-23,52;CL:0000945,1.92e-15,24;CL:0000826,1.92e-15,24;CL:0000791,1.12e-12,18;CL:0000789,1.12e-12,18;CL:0002420,1.12e-12,18;CL:0002419,1.12e-12,18;CL:0000790,1.12e-12,18;CL:0000084,1.04e-10,25;CL:0000827,1.04e-10,25;CL:0002087,2.78e-10,115;CL:0000625,6.56e-10,11;CL:0000738,1.13e-08,136;CL:0002031,9.47e-08,120|ontology_enrichment_development_v019=CL:0000051;5.34e-15;53!CL:0000790;6.82e-13;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!6.11e-13!115;UBERON:0000073!1.84e-11!94;UBERON:0001016!1.84e-11!94;UBERON:0005743!1.25e-10!86;UBERON:0001049!2.74e-10!57;UBERON:0005068!2.74e-10!57;UBERON:0006241!2.74e-10!57;UBERON:0007135!2.74e-10!57;UBERON:0001017!4.18e-10!82;UBERON:0000955!5.32e-10!69;UBERON:0006238!5.32e-10!69;UBERON:0002616!1.02e-09!59;UBERON:0002780!2.99e-09!41;UBERON:0001890!2.99e-09!41;UBERON:0006240!2.99e-09!41;UBERON:0003080!9.56e-09!42;UBERON:0002346!2.13e-07!90;UBERON:0001893!2.18e-07!34;UBERON:0002020!2.66e-07!34;UBERON:0003528!2.66e-07!34;UBERON:0002791!5.63e-07!33|ontology_enrichment_uberon_v019=UBERON:0004177;9.08e-11;5!UBERON:0005057;9.08e-11;5!UBERON:0000178;1.96e-09;15!UBERON:0000179;1.96e-09;15!UBERON:0000463;1.96e-09;15!UBERON:0002390;6.52e-09;32!UBERON:0002370;4.85e-08;2!UBERON:0005058;4.85e-08;2!UBERON:0009113;4.85e-08;2!UBERON:0005162;1.77e-07;2!UBERON:0000122;1.77e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.20e-09,15;UBERON:0000179,3.20e-09,15;UBERON:0000463,3.20e-09,15;UBERON:0005162,9.87e-08,2;UBERON:0000122,9.87e-08,2;UBERON:0004177,1.15e-07,7;UBERON:0005057,1.15e-07,7|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0.522371256399677,0,0,0.218441372130172,0.263766978228454,0.123766352960047,0,0,0,0.730310090387373,0,0.123121058076788,0.408001382488506,0.626909442956176,0.286235987131057,0.136874425072884,0.125542639594803,0.0764134057479513,0.0821005894499457,0.393553906568396,0,0.767658796194425,0.309632246632152,0,0,0,0.232401601740905,0.426507697462265,0,0,0,0.217010870715852,0.223915474239924,0.32389366601898,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0.19891667719909,0.182664153764634,1.75996244461323,4.36910889009705,6.22656477704488,3.41384178053206,4.40435585739614,4.02326707968138,4.62731410949403,1.90810750907073,6.83055562931338,4.69789751496751,3.44045905312706,0,0,0.263384084775077,0.983548850569165,2.75107533924415,1.23360899399706,1.00311897234407,0.977766799900771,2.36723902867367,1.94826728407911,1.00269411196656,1.17842362989935,0.443067789167242,1.62482318259009,1.40900451698243,0.910415432919148,0.822189523018381,0,0.579606171470105,1.92772532110679,2.1403266247177,1.04535523804977,0.453237370790265,0,0.34362744548263,0.253019692019503,0.95569624297229,0,2.85135613334512,1.35517607169996,1.02389288923535,2.49861453104692,2.13099526839615,0,0.604820229674197,0.802320587350522,1.15859523106239,0,0,0.255725123687061,0,0,0,0,0,0.283604451492204,0,0.263504357079378,0.458426764241994,0,0,0.324547393654683,0.174129737299267,0,2.14641561874808,0.571994910780128,0.371457501329565,0.39752481473341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,1.31780417436063,0,0,0,0,0.132409180813219,0,0.354668382198357,0,0,0.24666754841716,0.622422070799533,0,0,0.756787138224657,0.576175924479999,0.234321431833797,0,0,0,0,0,0,0.204154171254893,0,0.103325781175765,0,0,0,0,0.336672227908132,0.125118519871964,0.277064115484183,0,0,0.150238058906597,0.113432183160021,0,0.427114777637135,0,0.300091096084402,0.206105058476878,0.515281080091258,0,0.337552664482532,0.194874010322397,0,0.0920498986422993,0.323292113637624,0.355009592516614,0,0.339121184620975,0,0,0,0,0.132529768321485,0,0.518305275076852,0,0.36497735907583,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,1.26755034821831,0,0,0,0.491953754172454,0.171567810298526,0,0,0,0.0925884451585296,0,0,0,0.34779121492523,0.117408694235822,0.577465791044295,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4926 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8059 | |||
|TSSclassifier=S | |||
|UniProt=F5H4J1 | |||
|association_with_transcript=-38bp_to_ENST00000542977_5end | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_14_at_NUMA1_5end | |||
|id=chr11:71752221..71752232,- | |||
|ontology_enrichment_celltype=CL:0000542!1.45e-13!53;CL:0000051!1.45e-13!53;CL:0000838!6.04e-13!52;CL:0000236!1.00e-09!14;CL:0000945!3.48e-09!24;CL:0000826!3.48e-09!24;CL:0000791!8.84e-07!18;CL:0000789!8.84e-07!18;CL:0002420!8.84e-07!18;CL:0002419!8.84e-07!18;CL:0000790!8.84e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000236;2.19e-30;13!CL:0000945;2.92e-15;24!CL:0000542;5.34e-15;53!CL:0000791;6.82e-13;18!CL:0000789;6.82e-13;18!CL:0002419;6.82e-13;18!CL:0000084;7.46e-11;25!CL:0000625;4.45e-10;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,2.34e-28,14;CL:0000542,7.70e-25,53;CL:0000051,7.70e-25,53;CL:0000838,6.40e-23,52;CL:0000945,1.92e-15,24;CL:0000826,1.92e-15,24;CL:0000791,1.12e-12,18;CL:0000789,1.12e-12,18;CL:0002420,1.12e-12,18;CL:0002419,1.12e-12,18;CL:0000790,1.12e-12,18;CL:0000084,1.04e-10,25;CL:0000827,1.04e-10,25;CL:0002087,2.78e-10,115;CL:0000625,6.56e-10,11;CL:0000738,1.13e-08,136;CL:0002031,9.47e-08,120 | |||
|ontology_enrichment_development_v019=CL:0000051;5.34e-15;53!CL:0000790;6.82e-13;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.11e-13!115;UBERON:0000073!1.84e-11!94;UBERON:0001016!1.84e-11!94;UBERON:0005743!1.25e-10!86;UBERON:0001049!2.74e-10!57;UBERON:0005068!2.74e-10!57;UBERON:0006241!2.74e-10!57;UBERON:0007135!2.74e-10!57;UBERON:0001017!4.18e-10!82;UBERON:0000955!5.32e-10!69;UBERON:0006238!5.32e-10!69;UBERON:0002616!1.02e-09!59;UBERON:0002780!2.99e-09!41;UBERON:0001890!2.99e-09!41;UBERON:0006240!2.99e-09!41;UBERON:0003080!9.56e-09!42;UBERON:0002346!2.13e-07!90;UBERON:0001893!2.18e-07!34;UBERON:0002020!2.66e-07!34;UBERON:0003528!2.66e-07!34;UBERON:0002791!5.63e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0004177;9.08e-11;5!UBERON:0005057;9.08e-11;5!UBERON:0000178;1.96e-09;15!UBERON:0000179;1.96e-09;15!UBERON:0000463;1.96e-09;15!UBERON:0002390;6.52e-09;32!UBERON:0002370;4.85e-08;2!UBERON:0005058;4.85e-08;2!UBERON:0009113;4.85e-08;2!UBERON:0005162;1.77e-07;2!UBERON:0000122;1.77e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.20e-09,15;UBERON:0000179,3.20e-09,15;UBERON:0000463,3.20e-09,15;UBERON:0005162,9.87e-08,2;UBERON:0000122,9.87e-08,2;UBERON:0004177,1.15e-07,7;UBERON:0005057,1.15e-07,7 | |||
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| |||
|short_description=p14@NUMA1 | |||
}} |
Revision as of 19:29, 10 September 2013
Short description: | p14@NUMA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_14_at_NUMA1_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | -38bp_to_ENST00000542977_5end |
EntrezGene: | NUMA1 |
HGNC: | 8059 |
UniProt: | F5H4J1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 2.34e-28 | 14 |
lymphocyte | 7.70e-25 | 53 |
common lymphoid progenitor | 7.70e-25 | 53 |
lymphoid lineage restricted progenitor cell | 6.40e-23 | 52 |
lymphocyte of B lineage | 1.92e-15 | 24 |
pro-B cell | 1.92e-15 | 24 |
mature alpha-beta T cell | 1.12e-12 | 18 |
alpha-beta T cell | 1.12e-12 | 18 |
immature T cell | 1.12e-12 | 18 |
mature T cell | 1.12e-12 | 18 |
immature alpha-beta T cell | 1.12e-12 | 18 |
T cell | 1.04e-10 | 25 |
pro-T cell | 1.04e-10 | 25 |
nongranular leukocyte | 2.78e-10 | 115 |
CD8-positive, alpha-beta T cell | 6.56e-10 | 11 |
leukocyte | 1.13e-08 | 136 |
hematopoietic lineage restricted progenitor cell | 9.47e-08 | 120 |
Ontology term | p-value | n |
---|---|---|
blood | 3.20e-09 | 15 |
haemolymphatic fluid | 3.20e-09 | 15 |
organism substance | 3.20e-09 | 15 |
multi cell component structure | 9.87e-08 | 2 |
neuron projection bundle | 9.87e-08 | 2 |
hemopoietic organ | 1.15e-07 | 7 |
immune organ | 1.15e-07 | 7 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.