FFCP PHASE1:Hg19::chr12:1718142..1718149,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C0|description=CAGE_peak_at_chr12:1718142..1718149,+|id=chr12:1718142..1718149,+|ontology_enrichment_celltype=CL:0002057!1.17e-40!42;CL:0000860!1.84e-37!45;CL:0002194!2.50e-26!63;CL:0000576!2.50e-26!63;CL:0000040!2.50e-26!63;CL:0000559!2.50e-26!63;CL:0002009!2.62e-25!65;CL:0000839!5.21e-23!70;CL:0000557!1.37e-22!71;CL:0000766!1.19e-20!76;CL:0000763!3.79e-14!112;CL:0000049!3.79e-14!112;CL:0002087!4.87e-14!119;CL:0002031!4.01e-12!124;CL:0000738!8.09e-12!140;CL:0000037!5.05e-09!172;CL:0000566!5.05e-09!172;CL:0002032!6.21e-09!165;CL:0000837!6.21e-09!165;CL:0000988!3.99e-08!182|ontology_enrichment_celltype_v019=CL:0000860;1.41e-72;33!CL:0002057;1.41e-72;33!CL:0000473;8.41e-52;39!CL:0000234;8.41e-52;39!CL:0000576;7.69e-32;48!CL:0000766;4.77e-19;69!CL:0002087;3.38e-11;104!CL:0000763;7.27e-10;100!CL:0000738;3.76e-07;136|ontology_enrichment_celltype_v019_2=CL:0000860,2.29e-64,42;CL:0002057,2.29e-64,42;CL:0000473,5.63e-56,48;CL:0000234,5.63e-56,48;CL:0002194,3.19e-44,59;CL:0000576,3.19e-44,59;CL:0000040,3.19e-44,59;CL:0000559,3.19e-44,59;CL:0002009,1.05e-42,61;CL:0000839,2.63e-39,66;CL:0000557,1.10e-38,67;CL:0000766,7.68e-36,72;CL:0000763,4.84e-23,108;CL:0000049,4.84e-23,108;CL:0002087,1.79e-21,115;CL:0002031,1.84e-20,120;CL:0000738,1.01e-17,136;CL:0002032,1.60e-14,161;CL:0000837,1.60e-14,161;CL:0000037,8.57e-14,168;CL:0000988,6.10e-13,177|ontology_enrichment_development_v019=CL:0002057;5.97e-46;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!2.82e-19!80;UBERON:0002390!5.46e-19!102;UBERON:0003061!5.46e-19!102;UBERON:0002193!7.14e-18!112;UBERON:0001474!1.87e-17!86;UBERON:0002405!6.16e-16!115;UBERON:0007023!1.54e-15!115;UBERON:0004765!7.33e-14!101;UBERON:0001434!7.33e-14!101;UBERON:0003081!5.63e-09!216;UBERON:0001873!9.36e-07!2;UBERON:0010122!9.36e-07!2|ontology_enrichment_uberon_v019=UBERON:0002038;7.54e-10;1!UBERON:0002135;7.54e-10;1!UBERON:0009661;7.54e-10;1!UBERON:0002950;7.54e-10;1!UBERON:0001891;7.54e-10;1|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.88e-34,76;UBERON:0001474,3.55e-31,82;UBERON:0004765,3.52e-28,90;UBERON:0002405,3.46e-27,93;UBERON:0002390,1.15e-25,98;UBERON:0003061,1.15e-25,98;UBERON:0001434,4.23e-25,100;UBERON:0002193,4.84e-23,108;UBERON:0003081,6.52e-14,203;UBERON:0002204,6.81e-14,167;UBERON:0002135,1.07e-09,1;UBERON:0002038,1.17e-09,1;UBERON:0009661,1.17e-09,1;UBERON:0002950,1.17e-09,1;UBERON:0001891,1.17e-09,1;UBERON:0009616,1.17e-09,1;UBERON:0010286,1.17e-09,1;UBERON:0000926,8.57e-08,315;UBERON:0004120,8.57e-08,315;UBERON:0006603,8.57e-08,315|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0.726991193897824,0,0.485168122375632,1.16214518452842,0.411167888021826,1.54853185447552,1.43846196161075,0,1.6553756092201,8.61864201841546,3.87290810150296,2.70852973188684,1.50593871634084,0,1.34834090667051,2.44867113896722,1.28371610830437,7.67204550958849,0.659702600373432,0,0,3.48251086354301,2.26954089876456,6.22822248995575,2.76373531782418,0,0.65156653411535,0,4.41933163185078,20.5700551836575,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422008249231538,0,0,0,1.19548792950642,0,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11712960508902,0,0,0,0,0.446342914883745,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0.39669780522807,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55300672151593,0.124192805882767,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr12:1718142..1718149,+ | |||
|id=chr12:1718142..1718149,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.17e-40!42;CL:0000860!1.84e-37!45;CL:0002194!2.50e-26!63;CL:0000576!2.50e-26!63;CL:0000040!2.50e-26!63;CL:0000559!2.50e-26!63;CL:0002009!2.62e-25!65;CL:0000839!5.21e-23!70;CL:0000557!1.37e-22!71;CL:0000766!1.19e-20!76;CL:0000763!3.79e-14!112;CL:0000049!3.79e-14!112;CL:0002087!4.87e-14!119;CL:0002031!4.01e-12!124;CL:0000738!8.09e-12!140;CL:0000037!5.05e-09!172;CL:0000566!5.05e-09!172;CL:0002032!6.21e-09!165;CL:0000837!6.21e-09!165;CL:0000988!3.99e-08!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.41e-72;33!CL:0002057;1.41e-72;33!CL:0000473;8.41e-52;39!CL:0000234;8.41e-52;39!CL:0000576;7.69e-32;48!CL:0000766;4.77e-19;69!CL:0002087;3.38e-11;104!CL:0000763;7.27e-10;100!CL:0000738;3.76e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.29e-64,42;CL:0002057,2.29e-64,42;CL:0000473,5.63e-56,48;CL:0000234,5.63e-56,48;CL:0002194,3.19e-44,59;CL:0000576,3.19e-44,59;CL:0000040,3.19e-44,59;CL:0000559,3.19e-44,59;CL:0002009,1.05e-42,61;CL:0000839,2.63e-39,66;CL:0000557,1.10e-38,67;CL:0000766,7.68e-36,72;CL:0000763,4.84e-23,108;CL:0000049,4.84e-23,108;CL:0002087,1.79e-21,115;CL:0002031,1.84e-20,120;CL:0000738,1.01e-17,136;CL:0002032,1.60e-14,161;CL:0000837,1.60e-14,161;CL:0000037,8.57e-14,168;CL:0000988,6.10e-13,177 | |||
|ontology_enrichment_development_v019=CL:0002057;5.97e-46;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.82e-19!80;UBERON:0002390!5.46e-19!102;UBERON:0003061!5.46e-19!102;UBERON:0002193!7.14e-18!112;UBERON:0001474!1.87e-17!86;UBERON:0002405!6.16e-16!115;UBERON:0007023!1.54e-15!115;UBERON:0004765!7.33e-14!101;UBERON:0001434!7.33e-14!101;UBERON:0003081!5.63e-09!216;UBERON:0001873!9.36e-07!2;UBERON:0010122!9.36e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002038;7.54e-10;1!UBERON:0002135;7.54e-10;1!UBERON:0009661;7.54e-10;1!UBERON:0002950;7.54e-10;1!UBERON:0001891;7.54e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.88e-34,76;UBERON:0001474,3.55e-31,82;UBERON:0004765,3.52e-28,90;UBERON:0002405,3.46e-27,93;UBERON:0002390,1.15e-25,98;UBERON:0003061,1.15e-25,98;UBERON:0001434,4.23e-25,100;UBERON:0002193,4.84e-23,108;UBERON:0003081,6.52e-14,203;UBERON:0002204,6.81e-14,167;UBERON:0002135,1.07e-09,1;UBERON:0002038,1.17e-09,1;UBERON:0009661,1.17e-09,1;UBERON:0002950,1.17e-09,1;UBERON:0001891,1.17e-09,1;UBERON:0009616,1.17e-09,1;UBERON:0010286,1.17e-09,1;UBERON:0000926,8.57e-08,315;UBERON:0004120,8.57e-08,315;UBERON:0006603,8.57e-08,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0.726991193897824,0,0.485168122375632,1.16214518452842,0.411167888021826,1.54853185447552,1.43846196161075,0,1.6553756092201,8.61864201841546,3.87290810150296,2.70852973188684,1.50593871634084,0,1.34834090667051,2.44867113896722,1.28371610830437,7.67204550958849,0.659702600373432,0,0,3.48251086354301,2.26954089876456,6.22822248995575,2.76373531782418,0,0.65156653411535,0,4.41933163185078,20.5700551836575,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422008249231538,0,0,0,1.19548792950642,0,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11712960508902,0,0,0,0,0.446342914883745,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0.39669780522807,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55300672151593,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0.389720617678777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0793248022896,0,0,0,0.709036767709349,0,0,0,0,0,0,1.00337708206016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413731983447581,0.213233981900981,0,0.0645889098360061,0.186224142887574,0,0,0,0,0,0.0673520530145875,0.286888821570705,0.332660356546013,0,0,0,0,0,0,0,0.665756774185513,0.402547587182052,0 | |||
|short_description=p@chr12:1718142..1718149,+ | |||
}} |
Revision as of 22:01, 10 September 2013
Short description: | p@chr12:1718142..1718149, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:1718142..1718149, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
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CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.29e-64 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.29e-64 | 42 |
defensive cell | 5.63e-56 | 48 |
phagocyte | 5.63e-56 | 48 |
monopoietic cell | 3.19e-44 | 59 |
monocyte | 3.19e-44 | 59 |
monoblast | 3.19e-44 | 59 |
promonocyte | 3.19e-44 | 59 |
macrophage dendritic cell progenitor | 1.05e-42 | 61 |
myeloid lineage restricted progenitor cell | 2.63e-39 | 66 |
granulocyte monocyte progenitor cell | 1.10e-38 | 67 |
myeloid leukocyte | 7.68e-36 | 72 |
myeloid cell | 4.84e-23 | 108 |
common myeloid progenitor | 4.84e-23 | 108 |
nongranular leukocyte | 1.79e-21 | 115 |
hematopoietic lineage restricted progenitor cell | 1.84e-20 | 120 |
leukocyte | 1.01e-17 | 136 |
hematopoietic oligopotent progenitor cell | 1.60e-14 | 161 |
hematopoietic multipotent progenitor cell | 1.60e-14 | 161 |
hematopoietic stem cell | 8.57e-14 | 168 |
hematopoietic cell | 6.10e-13 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.88e-34 | 76 |
bone element | 3.55e-31 | 82 |
skeletal element | 3.52e-28 | 90 |
immune system | 3.46e-27 | 93 |
hematopoietic system | 1.15e-25 | 98 |
blood island | 1.15e-25 | 98 |
skeletal system | 4.23e-25 | 100 |
hemolymphoid system | 4.84e-23 | 108 |
lateral plate mesoderm | 6.52e-14 | 203 |
musculoskeletal system | 6.81e-14 | 167 |
mitral valve | 1.07e-09 | 1 |
substantia nigra | 1.17e-09 | 1 |
midbrain nucleus | 1.17e-09 | 1 |
regional part of midbrain | 1.17e-09 | 1 |
midbrain | 1.17e-09 | 1 |
presumptive midbrain | 1.17e-09 | 1 |
midbrain neural tube | 1.17e-09 | 1 |
mesoderm | 8.57e-08 | 315 |
mesoderm-derived structure | 8.57e-08 | 315 |
presumptive mesoderm | 8.57e-08 | 315 |
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