FFCP PHASE1:Hg19::chr12:53142714..53142730,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=N|UniProt=|association_with_transcript=154bp_to_ENST00000549824_5end|coexpression_cluster_id=C64|description=CAGE_peak_1_at_ENST00000549824_5end|id=chr12:53142714..53142730,+|ontology_enrichment_celltype=CL:0002274!1.86e-31!5;CL:0000457!1.86e-31!5;CL:0002191!1.86e-31!5;CL:0000097!1.86e-31!5;CL:0000831!1.86e-31!5;CL:0002028!1.86e-31!5;CL:0000163!2.13e-17!9|ontology_enrichment_celltype_v019=CL:0000097;2.77e-163;5!CL:0000163;3.71e-91;9!CL:0000151;2.62e-21;36!CL:0000766;6.66e-08;69|ontology_enrichment_celltype_v019_2=CL:0000097,3.28e-163,5;CL:0002028,3.28e-163,5;CL:0000163,4.08e-91,9;CL:0000151,2.42e-23,36;CL:0000839,8.53e-13,66;CL:0000557,1.30e-12,67;CL:0000766,8.79e-12,72;CL:0000763,5.03e-08,108;CL:0000049,5.03e-08,108;CL:0002031,2.91e-07,120|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:1909;1.17e-17;2|ontology_enrichment_disease_v019_2=DOID:1909,1.07e-17,2|ontology_enrichment_uberon=UBERON:0002771!1.39e-08!3;UBERON:0001869!8.09e-08!32;UBERON:0002791!1.45e-07!33;UBERON:0005418!1.54e-07!1;UBERON:0001389!1.54e-07!1;UBERON:0000026!1.54e-07!1;UBERON:0008784!1.54e-07!1;UBERON:0006058!1.54e-07!1;UBERON:0003663!1.54e-07!1;UBERON:0001383!1.54e-07!1;UBERON:0004256!1.54e-07!1;UBERON:0002529!1.54e-07!1;UBERON:0004708!1.54e-07!1;UBERON:0002101!1.54e-07!1;UBERON:0004709!1.54e-07!1;UBERON:0003661!1.54e-07!1;UBERON:0002471!1.54e-07!1;UBERON:0004357!1.54e-07!1;UBERON:0009872!1.54e-07!1;UBERON:0004347!1.54e-07!1;UBERON:0005420!1.54e-07!1;UBERON:0005732!1.54e-07!1;UBERON:0006057!1.54e-07!1;UBERON:0000978!1.54e-07!1;UBERON:0002103!1.54e-07!1;UBERON:0001665!1.54e-07!1;UBERON:0003823!1.54e-07!1;UBERON:0000154!1.54e-07!1;UBERON:0005733!1.54e-07!1;UBERON:0005730!1.54e-07!1;UBERON:0002020!2.53e-07!34;UBERON:0003528!2.53e-07!34;UBERON:0001893!2.53e-07!34;UBERON:0001874!3.62e-07!1;UBERON:0002022!5.50e-07!1;UBERON:0002363!7.40e-07!1;UBERON:0007647!7.40e-07!1;UBERON:0010115!7.40e-07!1|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.41e-11,76;UBERON:0001474,2.04e-10,82;UBERON:0004765,1.55e-09,90;UBERON:0002405,3.03e-09,93;UBERON:0002390,8.48e-09,98;UBERON:0003061,8.48e-09,98;UBERON:0001434,1.24e-08,100;UBERON:0002193,5.03e-08,108|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,6.40462209264727,5.81119664487292,4.14656231081544,3.02651902175619,2.01987893482208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0.556812347790485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0,0,0,0.415440338029185,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,2.42638588066636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0.150962843566674,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@ENST00000549824}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=154bp_to_ENST00000549824_5end | |||
|coexpression_cluster_id=C64 | |||
|description=CAGE_peak_1_at_ENST00000549824_5end | |||
|id=chr12:53142714..53142730,+ | |||
|ontology_enrichment_celltype=CL:0002274!1.86e-31!5;CL:0000457!1.86e-31!5;CL:0002191!1.86e-31!5;CL:0000097!1.86e-31!5;CL:0000831!1.86e-31!5;CL:0002028!1.86e-31!5;CL:0000163!2.13e-17!9 | |||
|ontology_enrichment_celltype_v019=CL:0000097;2.77e-163;5!CL:0000163;3.71e-91;9!CL:0000151;2.62e-21;36!CL:0000766;6.66e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,3.28e-163,5;CL:0002028,3.28e-163,5;CL:0000163,4.08e-91,9;CL:0000151,2.42e-23,36;CL:0000839,8.53e-13,66;CL:0000557,1.30e-12,67;CL:0000766,8.79e-12,72;CL:0000763,5.03e-08,108;CL:0000049,5.03e-08,108;CL:0002031,2.91e-07,120 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;1.17e-17;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,1.07e-17,2 | |||
|ontology_enrichment_uberon=UBERON:0002771!1.39e-08!3;UBERON:0001869!8.09e-08!32;UBERON:0002791!1.45e-07!33;UBERON:0005418!1.54e-07!1;UBERON:0001389!1.54e-07!1;UBERON:0000026!1.54e-07!1;UBERON:0008784!1.54e-07!1;UBERON:0006058!1.54e-07!1;UBERON:0003663!1.54e-07!1;UBERON:0001383!1.54e-07!1;UBERON:0004256!1.54e-07!1;UBERON:0002529!1.54e-07!1;UBERON:0004708!1.54e-07!1;UBERON:0002101!1.54e-07!1;UBERON:0004709!1.54e-07!1;UBERON:0003661!1.54e-07!1;UBERON:0002471!1.54e-07!1;UBERON:0004357!1.54e-07!1;UBERON:0009872!1.54e-07!1;UBERON:0004347!1.54e-07!1;UBERON:0005420!1.54e-07!1;UBERON:0005732!1.54e-07!1;UBERON:0006057!1.54e-07!1;UBERON:0000978!1.54e-07!1;UBERON:0002103!1.54e-07!1;UBERON:0001665!1.54e-07!1;UBERON:0003823!1.54e-07!1;UBERON:0000154!1.54e-07!1;UBERON:0005733!1.54e-07!1;UBERON:0005730!1.54e-07!1;UBERON:0002020!2.53e-07!34;UBERON:0003528!2.53e-07!34;UBERON:0001893!2.53e-07!34;UBERON:0001874!3.62e-07!1;UBERON:0002022!5.50e-07!1;UBERON:0002363!7.40e-07!1;UBERON:0007647!7.40e-07!1;UBERON:0010115!7.40e-07!1 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.41e-11,76;UBERON:0001474,2.04e-10,82;UBERON:0004765,1.55e-09,90;UBERON:0002405,3.03e-09,93;UBERON:0002390,8.48e-09,98;UBERON:0003061,8.48e-09,98;UBERON:0001434,1.24e-08,100;UBERON:0002193,5.03e-08,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,6.40462209264727,5.81119664487292,4.14656231081544,3.02651902175619,2.01987893482208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0.556812347790485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0,0,0,0.415440338029185,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,2.42638588066636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0.150962843566674,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@ENST00000549824 | |||
}} |
Revision as of 23:12, 10 September 2013
Short description: | p1@ENST00000549824 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENST00000549824_5end |
Coexpression cluster: | C64_Mast_chronic_acute_immature_chorionic_Basophils_Dendritic |
Association with transcript: | 154bp_to_ENST00000549824_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 3.28e-163 | 5 |
basophil mast progenitor cell | 3.28e-163 | 5 |
endocrine cell | 4.08e-91 | 9 |
secretory cell | 2.42e-23 | 36 |
myeloid lineage restricted progenitor cell | 8.53e-13 | 66 |
granulocyte monocyte progenitor cell | 1.30e-12 | 67 |
myeloid leukocyte | 8.79e-12 | 72 |
myeloid cell | 5.03e-08 | 108 |
common myeloid progenitor | 5.03e-08 | 108 |
hematopoietic lineage restricted progenitor cell | 2.91e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.41e-11 | 76 |
bone element | 2.04e-10 | 82 |
skeletal element | 1.55e-09 | 90 |
immune system | 3.03e-09 | 93 |
hematopoietic system | 8.48e-09 | 98 |
blood island | 8.48e-09 | 98 |
skeletal system | 1.24e-08 | 100 |
hemolymphoid system | 5.03e-08 | 108 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.07e-17 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.