FFCP PHASE1:Hg19::chr12:56091538..56091540,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C336|description=CAGE_peak_at_chr12:56091538..56091540,-|id=chr12:56091538..56091540,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0010226;1.88e-50;1!UBERON:0010227;3.99e-50;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004151!3.86e-19!3;UBERON:0007023!2.69e-15!115;UBERON:0002084!4.73e-15!1;UBERON:0002082!4.73e-15!1;UBERON:0004706!4.73e-15!1;UBERON:0002079!6.22e-15!1;UBERON:0001154!1.23e-14!1;UBERON:0001153!1.23e-14!1;UBERON:0002581!3.15e-14!1;UBERON:0007100!3.07e-08!27;UBERON:0002081!4.09e-08!2;UBERON:0001255!4.38e-08!2;UBERON:0001556!4.38e-08!2;UBERON:0001046!7.34e-07!19|ontology_enrichment_uberon_v019=UBERON:0004151;2.83e-66;3!UBERON:0002084;1.88e-50;1!UBERON:0002082;1.88e-50;1!UBERON:0002079;3.99e-50;1!UBERON:0002081;7.14e-26;2!UBERON:0001255;9.18e-26;2!UBERON:0001556;9.18e-26;2!UBERON:0007100;1.02e-18;25!UBERON:0000948;4.43e-10;22|ontology_enrichment_uberon_v019_2=UBERON:0004151,2.40e-66,3;UBERON:0002084,1.46e-50,1;UBERON:0002082,1.46e-50,1;UBERON:0010226,1.46e-50,1;UBERON:0002079,3.99e-50,1;UBERON:0002081,7.14e-26,2;UBERON:0010227,7.14e-26,2;UBERON:0001255,9.18e-26,2;UBERON:0001556,9.18e-26,2;UBERON:0007100,2.09e-17,27;UBERON:0003103,1.71e-12,68;UBERON:0000948,2.45e-09,24;UBERON:0005498,2.45e-09,24;UBERON:0004140,2.45e-09,24;UBERON:0009881,2.45e-09,24;UBERON:0004141,2.45e-09,24;UBERON:0003084,2.45e-09,24;UBERON:0007005,2.45e-09,24;UBERON:0004139,2.45e-09,24;UBERON:0004291,2.45e-09,24;UBERON:0007023,8.86e-08,114|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,1.38100767891707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775912131907355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.34757186162809,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.85878130549347,3.97255182219259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319267718114302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr12:56091538..56091540,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C336 | |||
|description=CAGE_peak_at_chr12:56091538..56091540,- | |||
|id=chr12:56091538..56091540,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010226;1.88e-50;1!UBERON:0010227;3.99e-50;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004151!3.86e-19!3;UBERON:0007023!2.69e-15!115;UBERON:0002084!4.73e-15!1;UBERON:0002082!4.73e-15!1;UBERON:0004706!4.73e-15!1;UBERON:0002079!6.22e-15!1;UBERON:0001154!1.23e-14!1;UBERON:0001153!1.23e-14!1;UBERON:0002581!3.15e-14!1;UBERON:0007100!3.07e-08!27;UBERON:0002081!4.09e-08!2;UBERON:0001255!4.38e-08!2;UBERON:0001556!4.38e-08!2;UBERON:0001046!7.34e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0004151;2.83e-66;3!UBERON:0002084;1.88e-50;1!UBERON:0002082;1.88e-50;1!UBERON:0002079;3.99e-50;1!UBERON:0002081;7.14e-26;2!UBERON:0001255;9.18e-26;2!UBERON:0001556;9.18e-26;2!UBERON:0007100;1.02e-18;25!UBERON:0000948;4.43e-10;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,2.40e-66,3;UBERON:0002084,1.46e-50,1;UBERON:0002082,1.46e-50,1;UBERON:0010226,1.46e-50,1;UBERON:0002079,3.99e-50,1;UBERON:0002081,7.14e-26,2;UBERON:0010227,7.14e-26,2;UBERON:0001255,9.18e-26,2;UBERON:0001556,9.18e-26,2;UBERON:0007100,2.09e-17,27;UBERON:0003103,1.71e-12,68;UBERON:0000948,2.45e-09,24;UBERON:0005498,2.45e-09,24;UBERON:0004140,2.45e-09,24;UBERON:0009881,2.45e-09,24;UBERON:0004141,2.45e-09,24;UBERON:0003084,2.45e-09,24;UBERON:0007005,2.45e-09,24;UBERON:0004139,2.45e-09,24;UBERON:0004291,2.45e-09,24;UBERON:0007023,8.86e-08,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,1.38100767891707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775912131907355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.34757186162809,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.85878130549347,3.97255182219259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319267718114302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:56091538..56091540,- | |||
}} |
Revision as of 23:26, 10 September 2013
Short description: | p@chr12:56091538..56091540, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:56091538..56091540, - |
Coexpression cluster: | C336_left_heart_skeletal_breast_lung_mature_adipose |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac chamber | 2.40e-66 | 3 |
heart left ventricle | 1.46e-50 | 1 |
cardiac ventricle | 1.46e-50 | 1 |
future cardiac ventricle | 1.46e-50 | 1 |
left cardiac atrium | 3.99e-50 | 1 |
cardiac atrium | 7.14e-26 | 2 |
future cardiac atrium | 7.14e-26 | 2 |
urinary bladder | 9.18e-26 | 2 |
lower urinary tract | 9.18e-26 | 2 |
primary circulatory organ | 2.09e-17 | 27 |
compound organ | 1.71e-12 | 68 |
heart | 2.45e-09 | 24 |
primitive heart tube | 2.45e-09 | 24 |
primary heart field | 2.45e-09 | 24 |
anterior lateral plate mesoderm | 2.45e-09 | 24 |
heart tube | 2.45e-09 | 24 |
heart primordium | 2.45e-09 | 24 |
cardiac mesoderm | 2.45e-09 | 24 |
cardiogenic plate | 2.45e-09 | 24 |
heart rudiment | 2.45e-09 | 24 |
adult organism | 8.86e-08 | 114 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.