FFCP PHASE1:Hg19::chr12:58159993..58160016,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1594|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=2606|TSSclassifier=W|UniProt=|association_with_transcript=277bp_to_ENST00000552186_5end|description=CAGE_peak_4_at_CYP27B1_5end|id=chr12:58159993..58160016,-|ontology_enrichment_celltype=CL:0000066!1.48e-21!254;CL:0002076!5.19e-21!43;CL:0002368!1.14e-19!13;CL:0000223!1.04e-14!59;CL:0002202!7.55e-12!9;CL:0002632!7.55e-12!9;CL:0002159!9.34e-12!13;CL:0000244!1.07e-09!4;CL:0000731!1.07e-09!4;CL:0002327!1.17e-09!4;CL:0000068!6.72e-08!3;CL:0000069!6.72e-08!3;CL:0000307!6.72e-08!3;CL:0000377!6.72e-08!3;CL:0002621!8.02e-08!3;CL:0002328!1.11e-07!3;CL:0000082!2.97e-07!19;CL:0002166!5.14e-07!3;CL:0000239!7.59e-07!3;CL:1000615!7.59e-07!3;CL:0002306!7.59e-07!3;CL:0002231!9.30e-07!3|ontology_enrichment_celltype_v019=CL:0000244;1.26e-26;4!CL:0000731;1.26e-26;4!CL:0002368;5.43e-25;13!CL:0002621;8.67e-21;3!CL:0002076;4.42e-17;42!CL:0002327;3.78e-16;4!CL:0002202;2.39e-12;9!CL:0002632;2.39e-12;9!CL:0000840;1.71e-10;5!CL:0000307;2.25e-10;3!CL:0002328;8.95e-10;3!CL:0000990;3.77e-07;8|ontology_enrichment_celltype_v019_2=CL:0000244,1.66e-26,4;CL:0000731,1.66e-26,4;CL:0002368,3.24e-25,13;CL:0002076,7.30e-21,42;CL:0002621,9.34e-21,3;CL:0002327,2.59e-16,4;CL:0000223,1.72e-14,58;CL:0002202,1.71e-12,9;CL:0002632,1.71e-12,9;CL:0000840,1.34e-10,5;CL:0001029,1.34e-10,5;CL:0000068,2.21e-10,3;CL:0000069,2.21e-10,3;CL:0000307,2.21e-10,3;CL:0000377,2.21e-10,3;CL:0002328,5.49e-10,3;CL:0000066,1.36e-08,253;CL:0000990,3.21e-07,8|ontology_enrichment_development_v019=CL:0000377;2.25e-10;3!CL:0000223;1.02e-08;58|ontology_enrichment_disease=DOID:1749!8.49e-08!14;DOID:305!6.95e-07!106|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!1.11e-18!169;UBERON:0000925!1.11e-18!169;UBERON:0006595!1.11e-18!169;UBERON:0005911!1.20e-16!82;UBERON:0001004!5.17e-14!72;UBERON:0005153!8.81e-14!37;UBERON:0001007!5.66e-13!155;UBERON:0001555!5.66e-13!155;UBERON:0007026!5.66e-13!155;UBERON:0005157!1.44e-12!51;UBERON:0000065!7.28e-12!53;UBERON:0005178!7.34e-12!34;UBERON:0002224!7.34e-12!34;UBERON:0005181!2.11e-11!35;UBERON:0004921!3.55e-10!129;UBERON:0004185!3.55e-10!129;UBERON:0004807!1.01e-09!28;UBERON:0001911!1.17e-09!4;UBERON:0005333!1.17e-09!4;UBERON:0008425!1.17e-09!4;UBERON:0005311!1.17e-09!4;UBERON:0007196!4.24e-09!14;UBERON:0001558!4.24e-09!14;UBERON:0001041!1.08e-08!98;UBERON:0000077!1.15e-08!130;UBERON:0000915!2.17e-08!52;UBERON:0006554!3.69e-08!44;UBERON:0005177!4.12e-08!107;UBERON:0009569!6.02e-08!113;UBERON:0000466!6.64e-08!126;UBERON:0001008!6.82e-08!45;UBERON:0000464!7.23e-08!104;UBERON:0001949!8.02e-08!3;UBERON:0000365!1.01e-07!5;UBERON:0004815!1.11e-07!3;UBERON:0002031!1.11e-07!3;UBERON:0008947!1.39e-07!38;UBERON:0003258!1.39e-07!38;UBERON:0000072!1.77e-07!46;UBERON:0002048!1.95e-07!22;UBERON:0000117!1.95e-07!22;UBERON:0000171!1.95e-07!22;UBERON:0000170!1.95e-07!22;UBERON:0005597!1.95e-07!22;UBERON:0000118!1.95e-07!22;UBERON:0003929!2.14e-07!54;UBERON:0004802!2.97e-07!19;UBERON:0000115!2.97e-07!19;UBERON:0000062!7.56e-07!511;UBERON:0006853!7.59e-07!3;UBERON:0007685!7.59e-07!3;UBERON:0004134!7.59e-07!3|ontology_enrichment_uberon_v019=UBERON:0000486;2.54e-26;12!UBERON:0000365;2.33e-21;5!UBERON:0001949;8.67e-21;3!UBERON:0005910;7.66e-18;6!UBERON:0001911;3.78e-16;4!UBERON:0005911;1.51e-10;36!UBERON:0004815;8.95e-10;3!UBERON:0002031;8.95e-10;3!UBERON:0003929;3.24e-09;7!UBERON:0003350;4.03e-08;8!UBERON:0001828;4.03e-08;8!UBERON:0007196;1.88e-07;15!UBERON:0001558;1.88e-07;15!UBERON:0006554;1.99e-07;30!UBERON:0001008;1.99e-07;30!UBERON:0004807;2.04e-07;22|ontology_enrichment_uberon_v019_2=UBERON:0000365,2.90e-21,5;UBERON:0001949,9.34e-21,3;UBERON:0005910,9.19e-18,6;UBERON:0001911,2.59e-16,4;UBERON:0005333,2.59e-16,4;UBERON:0008425,2.59e-16,4;UBERON:0005311,2.59e-16,4;UBERON:0004815,5.49e-10,3;UBERON:0002031,5.49e-10,3;UBERON:0001004,4.11e-09,74;UBERON:0000076,2.12e-08,8;UBERON:0003350,4.14e-08,8;UBERON:0001828,4.14e-08,8;UBERON:0007196,1.55e-07,15;UBERON:0001558,1.55e-07,15;UBERON:0004119,1.77e-07,160;UBERON:0000925,1.77e-07,160;UBERON:0006595,1.77e-07,160|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,1.8072355126695,1.47901604066715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,1.82147644146271,0.741568885568859,1.62273696827342,1.56716763569341,1.32957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35282597214308,1.36373060295417,2.00763216772303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614942192715568,0,0.109750285408626,1.1240175325762,0.703702806881416,0.83329600642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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1594 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2606 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=277bp_to_ENST00000552186_5end | |||
|description=CAGE_peak_4_at_CYP27B1_5end | |||
|id=chr12:58159993..58160016,- | |||
|ontology_enrichment_celltype=CL:0000066!1.48e-21!254;CL:0002076!5.19e-21!43;CL:0002368!1.14e-19!13;CL:0000223!1.04e-14!59;CL:0002202!7.55e-12!9;CL:0002632!7.55e-12!9;CL:0002159!9.34e-12!13;CL:0000244!1.07e-09!4;CL:0000731!1.07e-09!4;CL:0002327!1.17e-09!4;CL:0000068!6.72e-08!3;CL:0000069!6.72e-08!3;CL:0000307!6.72e-08!3;CL:0000377!6.72e-08!3;CL:0002621!8.02e-08!3;CL:0002328!1.11e-07!3;CL:0000082!2.97e-07!19;CL:0002166!5.14e-07!3;CL:0000239!7.59e-07!3;CL:1000615!7.59e-07!3;CL:0002306!7.59e-07!3;CL:0002231!9.30e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000244;1.26e-26;4!CL:0000731;1.26e-26;4!CL:0002368;5.43e-25;13!CL:0002621;8.67e-21;3!CL:0002076;4.42e-17;42!CL:0002327;3.78e-16;4!CL:0002202;2.39e-12;9!CL:0002632;2.39e-12;9!CL:0000840;1.71e-10;5!CL:0000307;2.25e-10;3!CL:0002328;8.95e-10;3!CL:0000990;3.77e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,1.66e-26,4;CL:0000731,1.66e-26,4;CL:0002368,3.24e-25,13;CL:0002076,7.30e-21,42;CL:0002621,9.34e-21,3;CL:0002327,2.59e-16,4;CL:0000223,1.72e-14,58;CL:0002202,1.71e-12,9;CL:0002632,1.71e-12,9;CL:0000840,1.34e-10,5;CL:0001029,1.34e-10,5;CL:0000068,2.21e-10,3;CL:0000069,2.21e-10,3;CL:0000307,2.21e-10,3;CL:0000377,2.21e-10,3;CL:0002328,5.49e-10,3;CL:0000066,1.36e-08,253;CL:0000990,3.21e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000377;2.25e-10;3!CL:0000223;1.02e-08;58 | |||
|ontology_enrichment_disease=DOID:1749!8.49e-08!14;DOID:305!6.95e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.11e-18!169;UBERON:0000925!1.11e-18!169;UBERON:0006595!1.11e-18!169;UBERON:0005911!1.20e-16!82;UBERON:0001004!5.17e-14!72;UBERON:0005153!8.81e-14!37;UBERON:0001007!5.66e-13!155;UBERON:0001555!5.66e-13!155;UBERON:0007026!5.66e-13!155;UBERON:0005157!1.44e-12!51;UBERON:0000065!7.28e-12!53;UBERON:0005178!7.34e-12!34;UBERON:0002224!7.34e-12!34;UBERON:0005181!2.11e-11!35;UBERON:0004921!3.55e-10!129;UBERON:0004185!3.55e-10!129;UBERON:0004807!1.01e-09!28;UBERON:0001911!1.17e-09!4;UBERON:0005333!1.17e-09!4;UBERON:0008425!1.17e-09!4;UBERON:0005311!1.17e-09!4;UBERON:0007196!4.24e-09!14;UBERON:0001558!4.24e-09!14;UBERON:0001041!1.08e-08!98;UBERON:0000077!1.15e-08!130;UBERON:0000915!2.17e-08!52;UBERON:0006554!3.69e-08!44;UBERON:0005177!4.12e-08!107;UBERON:0009569!6.02e-08!113;UBERON:0000466!6.64e-08!126;UBERON:0001008!6.82e-08!45;UBERON:0000464!7.23e-08!104;UBERON:0001949!8.02e-08!3;UBERON:0000365!1.01e-07!5;UBERON:0004815!1.11e-07!3;UBERON:0002031!1.11e-07!3;UBERON:0008947!1.39e-07!38;UBERON:0003258!1.39e-07!38;UBERON:0000072!1.77e-07!46;UBERON:0002048!1.95e-07!22;UBERON:0000117!1.95e-07!22;UBERON:0000171!1.95e-07!22;UBERON:0000170!1.95e-07!22;UBERON:0005597!1.95e-07!22;UBERON:0000118!1.95e-07!22;UBERON:0003929!2.14e-07!54;UBERON:0004802!2.97e-07!19;UBERON:0000115!2.97e-07!19;UBERON:0000062!7.56e-07!511;UBERON:0006853!7.59e-07!3;UBERON:0007685!7.59e-07!3;UBERON:0004134!7.59e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000486;2.54e-26;12!UBERON:0000365;2.33e-21;5!UBERON:0001949;8.67e-21;3!UBERON:0005910;7.66e-18;6!UBERON:0001911;3.78e-16;4!UBERON:0005911;1.51e-10;36!UBERON:0004815;8.95e-10;3!UBERON:0002031;8.95e-10;3!UBERON:0003929;3.24e-09;7!UBERON:0003350;4.03e-08;8!UBERON:0001828;4.03e-08;8!UBERON:0007196;1.88e-07;15!UBERON:0001558;1.88e-07;15!UBERON:0006554;1.99e-07;30!UBERON:0001008;1.99e-07;30!UBERON:0004807;2.04e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,2.90e-21,5;UBERON:0001949,9.34e-21,3;UBERON:0005910,9.19e-18,6;UBERON:0001911,2.59e-16,4;UBERON:0005333,2.59e-16,4;UBERON:0008425,2.59e-16,4;UBERON:0005311,2.59e-16,4;UBERON:0004815,5.49e-10,3;UBERON:0002031,5.49e-10,3;UBERON:0001004,4.11e-09,74;UBERON:0000076,2.12e-08,8;UBERON:0003350,4.14e-08,8;UBERON:0001828,4.14e-08,8;UBERON:0007196,1.55e-07,15;UBERON:0001558,1.55e-07,15;UBERON:0004119,1.77e-07,160;UBERON:0000925,1.77e-07,160;UBERON:0006595,1.77e-07,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,1.8072355126695,1.47901604066715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,1.82147644146271,0.741568885568859,1.62273696827342,1.56716763569341,1.32957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35282597214308,1.36373060295417,2.00763216772303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614942192715568,0,0.109750285408626,1.1240175325762,0.703702806881416,0.833296006426766,0,0,0,0,0,0,0,0,0,0,0,1.17002132569619,0.148631162288728,0.93733833986777,0.671928512795438,0.425325291727159,1.79117045405697,3.19697332365358,3.4504441124869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.483437798366489,1.00253235151642,0.184161977871793,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0.254876273045038,1.66215201785745,0.223874754722178,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,1.4875642382488,2.30628080838127,5.35973392477253,0.708104465988849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962221127255121,5.3624182042863,2.17781969722645,0.0941438007767792,1.29151611801369,1.68471475667626,1.33029046061003,1.1486170010348,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593929361665277,0,0,0,0.222617410045812,1.15362711958732,0,0,0,0.503865495708552,0,0,0,0.449341755736634,0.895105873378046,0,0,0,0,0,0,0,0.520855522170466,0.262379999988587,0,0.455173793141999,0.508507300585533,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195984794828755,0.609414446062818,0,0,0,0,0,0.193978032976839,0.0882561266915003,0,0,0.19871461170299,0,0,0.0801588202515337,0,0,0,0,0.171594997861965,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,1.49730843868477,0.314727528809989,0,0.179287339332845,0.959575986597226,0,0,0.25426853765475,0,0,0,0,0,1.02232813071253,0,0,0,0,0,0,0,0.320362237703084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231051332300676,0,0,0,0,0,3.90757005616546,0,0,0.739280431085226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354581522651905,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,1.03608082081518,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0.365753774946808,0,0,0,0,0,0,0,0,0,0.452888530700021,0.154348316215889,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0.352894871715692,0.160482733378337,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0.224263725161227,0.190941474834495,0,0,0,0.0673520530145875,0.286888821570705,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@CYP27B1 | |||
}} |
Revision as of 23:45, 10 September 2013
Short description: | p4@CYP27B1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_CYP27B1_5end |
Coexpression cluster: | NA |
Association with transcript: | 277bp_to_ENST00000552186_5end |
EntrezGene: | CYP27B1 |
HGNC: | 2606 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 1.66e-26 | 4 |
urothelial cell | 1.66e-26 | 4 |
respiratory epithelial cell | 3.24e-25 | 13 |
endo-epithelial cell | 7.30e-21 | 42 |
gingival epithelial cell | 9.34e-21 | 3 |
mammary gland epithelial cell | 2.59e-16 | 4 |
endodermal cell | 1.72e-14 | 58 |
epithelial cell of tracheobronchial tree | 1.71e-12 | 9 |
epithelial cell of lower respiratory tract | 1.71e-12 | 9 |
immature conventional dendritic cell | 1.34e-10 | 5 |
common dendritic progenitor | 1.34e-10 | 5 |
duct epithelial cell | 2.21e-10 | 3 |
branched duct epithelial cell | 2.21e-10 | 3 |
tracheal epithelial cell | 2.21e-10 | 3 |
tracheoblast | 2.21e-10 | 3 |
bronchial epithelial cell | 5.49e-10 | 3 |
epithelial cell | 1.36e-08 | 253 |
conventional dendritic cell | 3.21e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
urothelium | 2.90e-21 | 5 |
gingival epithelium | 9.34e-21 | 3 |
transitional epithelium | 9.19e-18 | 6 |
mammary gland | 2.59e-16 | 4 |
mammary bud | 2.59e-16 | 4 |
mammary ridge | 2.59e-16 | 4 |
mammary placode | 2.59e-16 | 4 |
lower respiratory tract epithelium | 5.49e-10 | 3 |
epithelium of bronchus | 5.49e-10 | 3 |
respiratory system | 4.11e-09 | 74 |
external ectoderm | 2.12e-08 | 8 |
epithelium of mucosa | 4.14e-08 | 8 |
gingiva | 4.14e-08 | 8 |
tracheobronchial tree | 1.55e-07 | 15 |
lower respiratory tract | 1.55e-07 | 15 |
endoderm-derived structure | 1.77e-07 | 160 |
endoderm | 1.77e-07 | 160 |
presumptive endoderm | 1.77e-07 | 160 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.