FFCP PHASE1:Hg19::chr13:23424018..23424020,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=39420|TSSclassifier=N|UniProt=|association_with_transcript=-219bp_to_ENST00000422350_5end|coexpression_cluster_id=C33|description=CAGE_peak_1_at_RFESDP1_5end|id=chr13:23424018..23424020,+|ontology_enrichment_celltype=CL:0002274!1.73e-19!5;CL:0000457!1.73e-19!5;CL:0002191!1.73e-19!5;CL:0000097!1.73e-19!5;CL:0000831!1.73e-19!5;CL:0002028!1.73e-19!5;CL:0000163!1.11e-10!9;CL:0000764!2.41e-09!2;CL:0000765!2.41e-09!2;CL:0000050!2.41e-09!2;CL:0000038!2.41e-09!2;CL:0000558!2.41e-09!2;CL:0000547!2.41e-09!2;CL:0000549!2.41e-09!2;CL:0000550!2.41e-09!2;CL:0000552!2.41e-09!2;CL:0000763!6.80e-07!112;CL:0000049!6.80e-07!112|ontology_enrichment_celltype_v019=CL:0000764;1.29e-26;2!CL:0000558;1.29e-26;2!CL:0000097;4.91e-11;5|ontology_enrichment_celltype_v019_2=CL:0000764,1.29e-26,2;CL:0000765,1.29e-26,2;CL:0000050,1.29e-26,2;CL:0000038,1.29e-26,2;CL:0000558,1.29e-26,2;CL:0000547,1.29e-26,2;CL:0000549,1.29e-26,2;CL:0000550,1.29e-26,2;CL:0000552,1.29e-26,2;CL:0000763,4.78e-15,108;CL:0000049,4.78e-15,108;CL:0002032,2.06e-11,161;CL:0000837,2.06e-11,161;CL:0000097,5.03e-11,5;CL:0002028,5.03e-11,5;CL:0000037,7.19e-11,168;CL:0000988,3.11e-10,177|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:1036!8.40e-31!8;DOID:1240!2.31e-16!39;DOID:2531!1.50e-13!51;DOID:0060083!1.50e-13!51;DOID:8692!5.21e-13!31|ontology_enrichment_disease_v019=DOID:1036;4.26e-75;8!DOID:8692;6.56e-24;31!DOID:1240;7.06e-20;39!DOID:2531;4.16e-12;51!DOID:0060083;4.16e-12;51|ontology_enrichment_disease_v019_2=DOID:1036,4.26e-75,8;DOID:8692,7.80e-25,31;DOID:1240,1.09e-24,39;DOID:2531,1.16e-18,51;DOID:0060083,1.16e-18,51|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0000341;2.25e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0000341,2.25e-07,2|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89722493252585,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.36060152002293,5.54705134283324,0.621984346622316,0.720599767084807,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.483437798366489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,67.5320420069478,69.5418299726235,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0.995985806877798,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,2.22724939116194,0,2.16364542780786,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638002319463839,0,0.533034776018635,1.02193298195737,0.31396051279005,0.664846727600626,8.79823076407005,7.05825123543862,9.90147363157472,16.6983284797283,3.97341447450947,0,0,0.141353071433941,0,0,0,0,0,0.617819694732514,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0.195551382734803,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0.268733889946905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8881279772348,0,0.339936274560377,0,3.97520666736664,0,0,0,0,0,0.157204305099666,0,0,0,0.243585196761792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0.709036767709349,0,0,0,0,0,0,0,0,0,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,1.0661699095049,0,0,0.124149428591716,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0|short_description=p1@RFESDP1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=39420 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-219bp_to_ENST00000422350_5end | |||
|coexpression_cluster_id=C33 | |||
|description=CAGE_peak_1_at_RFESDP1_5end | |||
|id=chr13:23424018..23424020,+ | |||
|ontology_enrichment_celltype=CL:0002274!1.73e-19!5;CL:0000457!1.73e-19!5;CL:0002191!1.73e-19!5;CL:0000097!1.73e-19!5;CL:0000831!1.73e-19!5;CL:0002028!1.73e-19!5;CL:0000163!1.11e-10!9;CL:0000764!2.41e-09!2;CL:0000765!2.41e-09!2;CL:0000050!2.41e-09!2;CL:0000038!2.41e-09!2;CL:0000558!2.41e-09!2;CL:0000547!2.41e-09!2;CL:0000549!2.41e-09!2;CL:0000550!2.41e-09!2;CL:0000552!2.41e-09!2;CL:0000763!6.80e-07!112;CL:0000049!6.80e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000764;1.29e-26;2!CL:0000558;1.29e-26;2!CL:0000097;4.91e-11;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,1.29e-26,2;CL:0000765,1.29e-26,2;CL:0000050,1.29e-26,2;CL:0000038,1.29e-26,2;CL:0000558,1.29e-26,2;CL:0000547,1.29e-26,2;CL:0000549,1.29e-26,2;CL:0000550,1.29e-26,2;CL:0000552,1.29e-26,2;CL:0000763,4.78e-15,108;CL:0000049,4.78e-15,108;CL:0002032,2.06e-11,161;CL:0000837,2.06e-11,161;CL:0000097,5.03e-11,5;CL:0002028,5.03e-11,5;CL:0000037,7.19e-11,168;CL:0000988,3.11e-10,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1036!8.40e-31!8;DOID:1240!2.31e-16!39;DOID:2531!1.50e-13!51;DOID:0060083!1.50e-13!51;DOID:8692!5.21e-13!31 | |||
|ontology_enrichment_disease_v019=DOID:1036;4.26e-75;8!DOID:8692;6.56e-24;31!DOID:1240;7.06e-20;39!DOID:2531;4.16e-12;51!DOID:0060083;4.16e-12;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,4.26e-75,8;DOID:8692,7.80e-25,31;DOID:1240,1.09e-24,39;DOID:2531,1.16e-18,51;DOID:0060083,1.16e-18,51 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000341;2.25e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000341,2.25e-07,2 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89722493252585,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.36060152002293,5.54705134283324,0.621984346622316,0.720599767084807,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.483437798366489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,67.5320420069478,69.5418299726235,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0.995985806877798,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,2.22724939116194,0,2.16364542780786,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638002319463839,0,0.533034776018635,1.02193298195737,0.31396051279005,0.664846727600626,8.79823076407005,7.05825123543862,9.90147363157472,16.6983284797283,3.97341447450947,0,0,0.141353071433941,0,0,0,0,0,0.617819694732514,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0.195551382734803,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0.268733889946905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8881279772348,0,0.339936274560377,0,3.97520666736664,0,0,0,0,0,0.157204305099666,0,0,0,0.243585196761792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0.709036767709349,0,0,0,0,0,0,0,0,0,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,1.0661699095049,0,0,0.124149428591716,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@RFESDP1 | |||
}} |
Revision as of 01:46, 11 September 2013
Short description: | p1@RFESDP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_RFESDP1_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | -219bp_to_ENST00000422350_5end |
EntrezGene: | NA |
HGNC: | 39420 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 1.29e-26 | 2 |
erythroblast | 1.29e-26 | 2 |
megakaryocyte-erythroid progenitor cell | 1.29e-26 | 2 |
erythroid progenitor cell | 1.29e-26 | 2 |
reticulocyte | 1.29e-26 | 2 |
proerythroblast | 1.29e-26 | 2 |
basophilic erythroblast | 1.29e-26 | 2 |
polychromatophilic erythroblast | 1.29e-26 | 2 |
orthochromatic erythroblast | 1.29e-26 | 2 |
myeloid cell | 4.78e-15 | 108 |
common myeloid progenitor | 4.78e-15 | 108 |
hematopoietic oligopotent progenitor cell | 2.06e-11 | 161 |
hematopoietic multipotent progenitor cell | 2.06e-11 | 161 |
mast cell | 5.03e-11 | 5 |
basophil mast progenitor cell | 5.03e-11 | 5 |
hematopoietic stem cell | 7.19e-11 | 168 |
hematopoietic cell | 3.11e-10 | 177 |
Ontology term | p-value | n |
---|---|---|
throat | 2.25e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 4.26e-75 | 8 |
myeloid leukemia | 7.80e-25 | 31 |
leukemia | 1.09e-24 | 39 |
hematologic cancer | 1.16e-18 | 51 |
immune system cancer | 1.16e-18 | 51 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.