FFCP PHASE1:Hg19::chr14:103593465..103593476,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7127|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11895|TSSclassifier=S|UniProt=|association_with_transcript=123bp_to_uc010txz.1_5end|description=CAGE_peak_24_at_TNFAIP2_5end|id=chr14:103593465..103593476,+|ontology_enrichment_celltype=CL:0002057!1.72e-13!42;CL:0000860!4.04e-12!45;CL:0002194!2.24e-07!63;CL:0000576!2.24e-07!63;CL:0000040!2.24e-07!63;CL:0000559!2.24e-07!63;CL:0002009!5.82e-07!65|ontology_enrichment_celltype_v019=CL:0002541;1.17e-08;3|ontology_enrichment_celltype_v019_2=CL:0002541,1.12e-08,3|ontology_enrichment_development_v019=UBERON:0010122;1.48e-12;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:4468;2.45e-12;2|ontology_enrichment_disease_v019_2=DOID:4468,1.65e-12,2|ontology_enrichment_uberon=UBERON:0001893!5.04e-14!34;UBERON:0001869!6.01e-14!32;UBERON:0002780!2.07e-13!41;UBERON:0001890!2.07e-13!41;UBERON:0006240!2.07e-13!41;UBERON:0002791!4.26e-13!33;UBERON:0003080!6.22e-13!42;UBERON:0001049!1.71e-12!57;UBERON:0005068!1.71e-12!57;UBERON:0006241!1.71e-12!57;UBERON:0007135!1.71e-12!57;UBERON:0002619!7.51e-12!22;UBERON:0003056!8.54e-12!61;UBERON:0000062!1.11e-11!511;UBERON:0002020!2.15e-11!34;UBERON:0003528!2.15e-11!34;UBERON:0001950!2.34e-11!20;UBERON:0007023!6.17e-11!115;UBERON:0002616!7.94e-11!59;UBERON:0003075!1.84e-10!86;UBERON:0007284!1.84e-10!86;UBERON:0000955!2.42e-10!69;UBERON:0006238!2.42e-10!69;UBERON:0000956!5.61e-10!25;UBERON:0000203!5.61e-10!25;UBERON:0001017!8.67e-10!82;UBERON:0005743!1.36e-09!86;UBERON:0002346!1.38e-09!90;UBERON:0000033!8.19e-09!123;UBERON:0000153!1.37e-08!129;UBERON:0007811!1.37e-08!129;UBERON:0000073!1.52e-08!94;UBERON:0001016!1.52e-08!94;UBERON:0000064!4.98e-08!219;UBERON:0000922!7.11e-08!612;UBERON:0000468!2.00e-07!659;UBERON:0000467!3.23e-07!625;UBERON:0000480!3.72e-07!626|ontology_enrichment_uberon_v019=UBERON:0000369;4.35e-50;4!UBERON:0002435;4.35e-50;4!UBERON:0000204;4.35e-50;4!UBERON:0002420;1.88e-39;9!UBERON:0007245;1.88e-39;9!UBERON:0010009;1.88e-39;9!UBERON:0010011;1.88e-39;9!UBERON:0000454;1.88e-39;9!UBERON:0005383;1.84e-30;3!UBERON:0005382;1.84e-30;3!UBERON:0009663;5.12e-29;7!UBERON:0001882;2.93e-23;1!UBERON:0001874;2.93e-23;1!UBERON:0005403;2.93e-23;1!UBERON:0000125;9.34e-23;9!UBERON:0002308;9.34e-23;9!UBERON:0000349;1.48e-18;5!UBERON:0001873;1.48e-12;2!UBERON:0001876;2.45e-12;2!UBERON:0002791;1.06e-11;32!UBERON:0001869;1.01e-10;32!UBERON:0003528;3.16e-10;34!UBERON:0002020;3.16e-10;34!UBERON:0001893;9.78e-10;34!UBERON:0003124;1.17e-08;3!UBERON:0000920;1.17e-08;3!UBERON:0002780;3.25e-08;41!UBERON:0001890;3.25e-08;41|ontology_enrichment_uberon_v019_2=UBERON:0000369,1.01e-49,4;UBERON:0002435,1.01e-49,4;UBERON:0000204,1.01e-49,4;UBERON:0010082,1.01e-49,4;UBERON:0002420,3.25e-39,9;UBERON:0007245,3.25e-39,9;UBERON:0010009,3.25e-39,9;UBERON:0010011,3.25e-39,9;UBERON:0000454,3.25e-39,9;UBERON:0005383,2.30e-30,3;UBERON:0005382,2.30e-30,3;UBERON:0009663,8.26e-29,7;UBERON:0001874,4.10e-23,1;UBERON:0001882,6.40e-23,1;UBERON:0005403,6.40e-23,1;UBERON:0000125,1.35e-22,9;UBERON:0002308,1.35e-22,9;UBERON:0000349,2.11e-18,5;UBERON:0001873,1.48e-12,2;UBERON:0010122,1.48e-12,2;UBERON:0001876,2.59e-12,2;UBERON:0002791,4.62e-11,32;UBERON:0001869,4.62e-11,32;UBERON:0003528,1.88e-10,34;UBERON:0002020,1.88e-10,34;UBERON:0001893,1.88e-10,34;UBERON:0002780,9.04e-09,41;UBERON:0001890,9.04e-09,41;UBERON:0003080,9.04e-09,41;UBERON:0006240,9.04e-09,41;UBERON:0000920,1.12e-08,3;UBERON:0007023,6.47e-07,114;UBERON:0000073,6.83e-07,53;UBERON:0002616,6.83e-07,53|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.401088894940283,0.217010870715852,0,0,0.257575567634187,0,0.377875943688809,0,0.232429036905685,0,0.309706370895104,0,0.512321413058201,0.236482229888585,0.344745680736619,0.645484683583826,1.35426486594342,0,0,0,0.306083892370903,0,0.639337125799041,0.329851300186716,0,0.852449501065388,0.870627715885752,0.56738522469114,0.622822248995575,0.251248665256743,0.521482918420201,0,0.605399502633369,0.368277635987565,0,0,0,0,0.112328631146495,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.132529768321485,0.232387885739037,0,0,0,0,0,0,0,0,0,0.168584690078102,0.482022059766964,0,0.217879444092406,0.474541238222193,0,0.392442930250692,0.38474715694639,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36257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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7127 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11895 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=123bp_to_uc010txz.1_5end | |||
|description=CAGE_peak_24_at_TNFAIP2_5end | |||
|id=chr14:103593465..103593476,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.72e-13!42;CL:0000860!4.04e-12!45;CL:0002194!2.24e-07!63;CL:0000576!2.24e-07!63;CL:0000040!2.24e-07!63;CL:0000559!2.24e-07!63;CL:0002009!5.82e-07!65 | |||
|ontology_enrichment_celltype_v019=CL:0002541;1.17e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.12e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0010122;1.48e-12;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4468;2.45e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,1.65e-12,2 | |||
|ontology_enrichment_uberon=UBERON:0001893!5.04e-14!34;UBERON:0001869!6.01e-14!32;UBERON:0002780!2.07e-13!41;UBERON:0001890!2.07e-13!41;UBERON:0006240!2.07e-13!41;UBERON:0002791!4.26e-13!33;UBERON:0003080!6.22e-13!42;UBERON:0001049!1.71e-12!57;UBERON:0005068!1.71e-12!57;UBERON:0006241!1.71e-12!57;UBERON:0007135!1.71e-12!57;UBERON:0002619!7.51e-12!22;UBERON:0003056!8.54e-12!61;UBERON:0000062!1.11e-11!511;UBERON:0002020!2.15e-11!34;UBERON:0003528!2.15e-11!34;UBERON:0001950!2.34e-11!20;UBERON:0007023!6.17e-11!115;UBERON:0002616!7.94e-11!59;UBERON:0003075!1.84e-10!86;UBERON:0007284!1.84e-10!86;UBERON:0000955!2.42e-10!69;UBERON:0006238!2.42e-10!69;UBERON:0000956!5.61e-10!25;UBERON:0000203!5.61e-10!25;UBERON:0001017!8.67e-10!82;UBERON:0005743!1.36e-09!86;UBERON:0002346!1.38e-09!90;UBERON:0000033!8.19e-09!123;UBERON:0000153!1.37e-08!129;UBERON:0007811!1.37e-08!129;UBERON:0000073!1.52e-08!94;UBERON:0001016!1.52e-08!94;UBERON:0000064!4.98e-08!219;UBERON:0000922!7.11e-08!612;UBERON:0000468!2.00e-07!659;UBERON:0000467!3.23e-07!625;UBERON:0000480!3.72e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0000369;4.35e-50;4!UBERON:0002435;4.35e-50;4!UBERON:0000204;4.35e-50;4!UBERON:0002420;1.88e-39;9!UBERON:0007245;1.88e-39;9!UBERON:0010009;1.88e-39;9!UBERON:0010011;1.88e-39;9!UBERON:0000454;1.88e-39;9!UBERON:0005383;1.84e-30;3!UBERON:0005382;1.84e-30;3!UBERON:0009663;5.12e-29;7!UBERON:0001882;2.93e-23;1!UBERON:0001874;2.93e-23;1!UBERON:0005403;2.93e-23;1!UBERON:0000125;9.34e-23;9!UBERON:0002308;9.34e-23;9!UBERON:0000349;1.48e-18;5!UBERON:0001873;1.48e-12;2!UBERON:0001876;2.45e-12;2!UBERON:0002791;1.06e-11;32!UBERON:0001869;1.01e-10;32!UBERON:0003528;3.16e-10;34!UBERON:0002020;3.16e-10;34!UBERON:0001893;9.78e-10;34!UBERON:0003124;1.17e-08;3!UBERON:0000920;1.17e-08;3!UBERON:0002780;3.25e-08;41!UBERON:0001890;3.25e-08;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,1.01e-49,4;UBERON:0002435,1.01e-49,4;UBERON:0000204,1.01e-49,4;UBERON:0010082,1.01e-49,4;UBERON:0002420,3.25e-39,9;UBERON:0007245,3.25e-39,9;UBERON:0010009,3.25e-39,9;UBERON:0010011,3.25e-39,9;UBERON:0000454,3.25e-39,9;UBERON:0005383,2.30e-30,3;UBERON:0005382,2.30e-30,3;UBERON:0009663,8.26e-29,7;UBERON:0001874,4.10e-23,1;UBERON:0001882,6.40e-23,1;UBERON:0005403,6.40e-23,1;UBERON:0000125,1.35e-22,9;UBERON:0002308,1.35e-22,9;UBERON:0000349,2.11e-18,5;UBERON:0001873,1.48e-12,2;UBERON:0010122,1.48e-12,2;UBERON:0001876,2.59e-12,2;UBERON:0002791,4.62e-11,32;UBERON:0001869,4.62e-11,32;UBERON:0003528,1.88e-10,34;UBERON:0002020,1.88e-10,34;UBERON:0001893,1.88e-10,34;UBERON:0002780,9.04e-09,41;UBERON:0001890,9.04e-09,41;UBERON:0003080,9.04e-09,41;UBERON:0006240,9.04e-09,41;UBERON:0000920,1.12e-08,3;UBERON:0007023,6.47e-07,114;UBERON:0000073,6.83e-07,53;UBERON:0002616,6.83e-07,53 | |||
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|short_description=p24@TNFAIP2 | |||
}} |
Revision as of 03:23, 11 September 2013
Short description: | p24@TNFAIP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_24_at_TNFAIP2_5end |
Coexpression cluster: | NA |
Association with transcript: | 123bp_to_uc010txz.1_5end |
EntrezGene: | TNFAIP2 |
HGNC: | 11895 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.12e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
corpus striatum | 1.01e-49 | 4 |
striatum | 1.01e-49 | 4 |
ventral part of telencephalon | 1.01e-49 | 4 |
future corpus striatum | 1.01e-49 | 4 |
basal ganglion | 3.25e-39 | 9 |
nuclear complex of neuraxis | 3.25e-39 | 9 |
aggregate regional part of brain | 3.25e-39 | 9 |
collection of basal ganglia | 3.25e-39 | 9 |
cerebral subcortex | 3.25e-39 | 9 |
caudate-putamen | 2.30e-30 | 3 |
dorsal striatum | 2.30e-30 | 3 |
telencephalic nucleus | 8.26e-29 | 7 |
putamen | 4.10e-23 | 1 |
nucleus accumbens | 6.40e-23 | 1 |
ventral striatum | 6.40e-23 | 1 |
neural nucleus | 1.35e-22 | 9 |
nucleus of brain | 1.35e-22 | 9 |
limbic system | 2.11e-18 | 5 |
caudate nucleus | 1.48e-12 | 2 |
future caudate nucleus | 1.48e-12 | 2 |
amygdala | 2.59e-12 | 2 |
regional part of telencephalon | 4.62e-11 | 32 |
cerebral hemisphere | 4.62e-11 | 32 |
brain grey matter | 1.88e-10 | 34 |
gray matter | 1.88e-10 | 34 |
telencephalon | 1.88e-10 | 34 |
regional part of forebrain | 9.04e-09 | 41 |
forebrain | 9.04e-09 | 41 |
anterior neural tube | 9.04e-09 | 41 |
future forebrain | 9.04e-09 | 41 |
egg chorion | 1.12e-08 | 3 |
adult organism | 6.47e-07 | 114 |
regional part of nervous system | 6.83e-07 | 53 |
regional part of brain | 6.83e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 1.65e-12 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.