FFCP PHASE1:Hg19::chr15:45021381..45021390,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=140691|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=17857|TSSclassifier=S|UniProt=|association_with_transcript=41bp_to_ENST00000561237_5end|coexpression_cluster_id=C7|description=CAGE_peak_7_at_TRIM69_5end|id=chr15:45021381..45021390,+|ontology_enrichment_celltype=CL:0000860!2.64e-15!45;CL:0002057!7.51e-15!42;CL:0000766!1.65e-10!76;CL:0002194!9.83e-09!63;CL:0000576!9.83e-09!63;CL:0000040!9.83e-09!63;CL:0000559!9.83e-09!63;CL:0002009!1.07e-08!65;CL:0000557!1.28e-08!71;CL:0000839!2.80e-08!70|ontology_enrichment_celltype_v019=CL:0000860;2.65e-23;33!CL:0002057;2.65e-23;33!CL:0000473;1.15e-16;39!CL:0000234;1.15e-16;39!CL:0000576;2.05e-12;48!CL:0000766;1.50e-08;69!CL:0000771;2.49e-08;2!CL:0000081;5.47e-08;11!CL:0000094;1.88e-07;8|ontology_enrichment_celltype_v019_2=CL:0000860,1.59e-21,42;CL:0002057,1.59e-21,42;CL:0000473,2.70e-18,48;CL:0000234,2.70e-18,48;CL:0000766,4.15e-17,72;CL:0002194,8.64e-14,59;CL:0000576,8.64e-14,59;CL:0000040,8.64e-14,59;CL:0000559,8.64e-14,59;CL:0002009,3.28e-13,61;CL:0000839,6.44e-12,66;CL:0000557,1.11e-11,67;CL:0000763,9.41e-10,108;CL:0000049,9.41e-10,108;CL:0000738,1.77e-08,136;CL:0000771,2.17e-08,2;CL:0000081,4.40e-08,11;CL:0000094,1.73e-07,8;CL:0002087,7.27e-07,115|ontology_enrichment_development_v019=CL:0002057;4.04e-16;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:114;3.10e-08;2|ontology_enrichment_disease_v019_2=DOID:114,1.67e-08,2|ontology_enrichment_uberon=UBERON:0007023!4.39e-15!115;UBERON:0002390!9.09e-11!102;UBERON:0003061!9.09e-11!102;UBERON:0002193!1.72e-09!112;UBERON:0002371!1.35e-07!80|ontology_enrichment_uberon_v019=UBERON:0007100;5.27e-08;25|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.99e-14,98;UBERON:0003061,8.99e-14,98;UBERON:0002371,1.15e-12,76;UBERON:0002193,5.43e-12,108;UBERON:0001474,2.04e-11,82;UBERON:0004765,5.15e-10,90;UBERON:0003081,1.27e-09,203;UBERON:0002405,1.49e-09,93;UBERON:0001434,1.39e-08,100;UBERON:0007100,1.67e-07,27;UBERON:0002204,9.28e-07,167|phase1_expression=0,0.214100523890983,0.281908808191942,0,0.446961094427288,0,0,0,0,0,0,0,0,0.495065411840187,0,0,0,0,0,0,0.204000691244253,0.313454721478088,0,0.410623275218653,0.376627918784408,0.305653622991805,0.328402357799783,0.0787107813136792,0,0,0.154816123316076,0,0.30120591877825,0,0.0774672005803016,0.142169232487422,0.293600439334847,0,0.401088894940283,0,0.223915474239924,0.32389366601898,0.257575567634187,0.436194716338694,0.377875943688809,0.727752183563449,0.697287110717054,0,1.23882548358041,9.49384894663097,6.66017836975662,9.45928919554341,0.689491361473237,1.29096936716765,1.35426486594342,0.941211697713023,0.818718450173537,0.224723484445085,0.918251677112708,0.641858054152187,1.27867425159808,5.93732340336089,5.18605509816243,8.09827026012119,0.580418477257168,2.26954089876456,0,5.27622197039161,5.21482918420201,5.64690996233303,1.21079900526674,0,1.26584954976354,0.845021145247767,0.425208599930087,0.628975936525128,0.44931452458598,0.150176892841506,0.16072558669708,0.285012743741249,1.9891667719909,0.547992461293902,0,1.09227722252426,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786021525498329,0,0.501559486172034,0,0,0,0.891283655081389,0,0.443067789167242,0.812411591295047,1.0247305578054,1.1705341280389,0.493313713811028,0,0,0.14828656316206,0,0,0.906474741580529,0,0,0,0.318565414324097,0,0.950452044448374,0.602300476311091,0.383959833463255,0,0.947109008176067,0,0,0,0.144824403882799,0,0.670700859703636,0.12786256184353,1.0843174571537,0,0.289693037921647,0,0.486634870302636,0.378139268656271,0,0.087834785693126,0.0654895377488563,0,0,0.649094787309367,0,0.132957960518865,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0.24406205754817,0,0,0.17859945656816,0.22452937262617,0,0,0,0,1.31780417436063,3.87780264148325,0,0,0.25326102332916,0.132409180813219,0.573673241497627,0.354668382198357,0,0,0.49333509683432,0,0,0.490385709340376,0.151357427644931,0,0.234321431833797,0,0,0,0.117434498643765,0.161872944368132,0,0.408308342509787,0.122834317311768,0,0,0.247266929278557,0.910161361938026,0,0.336672227908132,0,0.277064115484183,0,0,0.901428353439581,0.113432183160021,0,0,0,0,0.309157587715317,0,0.18611685633159,0,0,0.252433774244115,0.368199594569197,0.969876340912871,0,0.10075209822764,0.169560592310488,0,0.272746120590835,0,0.487894824518382,0.265059536642971,0.348581828608555,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0.330881918197182,0,0,0.134831308160164,0.196221465125346,0,0,0,0.8231480226628,0,0,0,0.590789906681404,0,0.122988438543114,0,0.109750285408626,0,0,0.370353780634118,0.325808305310325,0,0,0.579652024875384,0.234817388471643,0.144366447761074,0,0.380508304469197,0,0,0,0,0.148631162288728,0,0.16798212819886,0,0.0895585227028483,0,0,0.985326475791887,0.528290604079356,0,0.144119953416961,0.12624243342638,0.063497894292169,0,0,0,0.205654985406647,0,0.857479297891735,0.112131084345361,1.30788020649984,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0.791951872933429,0,0.871533458600294,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=140691 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17857 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=41bp_to_ENST00000561237_5end | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_7_at_TRIM69_5end | |||
|id=chr15:45021381..45021390,+ | |||
|ontology_enrichment_celltype=CL:0000860!2.64e-15!45;CL:0002057!7.51e-15!42;CL:0000766!1.65e-10!76;CL:0002194!9.83e-09!63;CL:0000576!9.83e-09!63;CL:0000040!9.83e-09!63;CL:0000559!9.83e-09!63;CL:0002009!1.07e-08!65;CL:0000557!1.28e-08!71;CL:0000839!2.80e-08!70 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.65e-23;33!CL:0002057;2.65e-23;33!CL:0000473;1.15e-16;39!CL:0000234;1.15e-16;39!CL:0000576;2.05e-12;48!CL:0000766;1.50e-08;69!CL:0000771;2.49e-08;2!CL:0000081;5.47e-08;11!CL:0000094;1.88e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.59e-21,42;CL:0002057,1.59e-21,42;CL:0000473,2.70e-18,48;CL:0000234,2.70e-18,48;CL:0000766,4.15e-17,72;CL:0002194,8.64e-14,59;CL:0000576,8.64e-14,59;CL:0000040,8.64e-14,59;CL:0000559,8.64e-14,59;CL:0002009,3.28e-13,61;CL:0000839,6.44e-12,66;CL:0000557,1.11e-11,67;CL:0000763,9.41e-10,108;CL:0000049,9.41e-10,108;CL:0000738,1.77e-08,136;CL:0000771,2.17e-08,2;CL:0000081,4.40e-08,11;CL:0000094,1.73e-07,8;CL:0002087,7.27e-07,115 | |||
|ontology_enrichment_development_v019=CL:0002057;4.04e-16;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;3.10e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.67e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.39e-15!115;UBERON:0002390!9.09e-11!102;UBERON:0003061!9.09e-11!102;UBERON:0002193!1.72e-09!112;UBERON:0002371!1.35e-07!80 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;5.27e-08;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.99e-14,98;UBERON:0003061,8.99e-14,98;UBERON:0002371,1.15e-12,76;UBERON:0002193,5.43e-12,108;UBERON:0001474,2.04e-11,82;UBERON:0004765,5.15e-10,90;UBERON:0003081,1.27e-09,203;UBERON:0002405,1.49e-09,93;UBERON:0001434,1.39e-08,100;UBERON:0007100,1.67e-07,27;UBERON:0002204,9.28e-07,167 | |||
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| |||
|short_description=p7@TRIM69 | |||
}} |
Revision as of 07:09, 11 September 2013
Short description: | p7@TRIM69 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_TRIM69_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 41bp_to_ENST00000561237_5end |
EntrezGene: | TRIM69 |
HGNC: | 17857 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.59e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.59e-21 | 42 |
defensive cell | 2.70e-18 | 48 |
phagocyte | 2.70e-18 | 48 |
myeloid leukocyte | 4.15e-17 | 72 |
monopoietic cell | 8.64e-14 | 59 |
monocyte | 8.64e-14 | 59 |
monoblast | 8.64e-14 | 59 |
promonocyte | 8.64e-14 | 59 |
macrophage dendritic cell progenitor | 3.28e-13 | 61 |
myeloid lineage restricted progenitor cell | 6.44e-12 | 66 |
granulocyte monocyte progenitor cell | 1.11e-11 | 67 |
myeloid cell | 9.41e-10 | 108 |
common myeloid progenitor | 9.41e-10 | 108 |
leukocyte | 1.77e-08 | 136 |
eosinophil | 2.17e-08 | 2 |
blood cell | 4.40e-08 | 11 |
granulocyte | 1.73e-07 | 8 |
nongranular leukocyte | 7.27e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.99e-14 | 98 |
blood island | 8.99e-14 | 98 |
bone marrow | 1.15e-12 | 76 |
hemolymphoid system | 5.43e-12 | 108 |
bone element | 2.04e-11 | 82 |
skeletal element | 5.15e-10 | 90 |
lateral plate mesoderm | 1.27e-09 | 203 |
immune system | 1.49e-09 | 93 |
skeletal system | 1.39e-08 | 100 |
primary circulatory organ | 1.67e-07 | 27 |
musculoskeletal system | 9.28e-07 | 167 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.67e-08 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.