FFCP PHASE1:Hg19::chr15:52671674..52671696,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C36|description=CAGE_peak_at_chr15:52671674..52671696,-|id=chr15:52671674..52671696,-|ontology_enrichment_celltype=CL:0000945!7.80e-27!24;CL:0000826!7.80e-27!24;CL:0000838!6.32e-16!52;CL:0000542!1.42e-15!53;CL:0000051!1.42e-15!53;CL:0000453!2.90e-11!5;CL:0000080!2.66e-09!6;CL:0000988!2.95e-09!182;CL:0000738!3.10e-09!140;CL:0002087!1.69e-07!119;CL:0002032!2.78e-07!165;CL:0000837!2.78e-07!165;CL:0002031!4.43e-07!124;CL:0000037!7.71e-07!172;CL:0000566!7.71e-07!172;CL:0000946!8.98e-07!1;CL:0000786!8.98e-07!1;CL:0000980!8.98e-07!1|ontology_enrichment_celltype_v019=CL:0000453;2.22e-30;5!CL:0000945;1.81e-17;24!CL:0000990;3.25e-17;8!CL:0000451;3.30e-14;10|ontology_enrichment_celltype_v019_2=CL:0000453,2.12e-30,5;CL:0000945,1.81e-17,24;CL:0000826,1.81e-17,24;CL:0000990,3.16e-17,8;CL:0000451,3.23e-14,10;CL:0000988,2.16e-10,177;CL:0000838,4.38e-08,52;CL:0000542,6.23e-08,53;CL:0000051,6.23e-08,53;CL:0000738,3.33e-07,136|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:0060058!3.16e-09!10;DOID:630!2.50e-07!1;DOID:0050177!2.50e-07!1;DOID:0050427!2.50e-07!1;DOID:4960!4.25e-07!1;DOID:0070004!4.25e-07!1;DOID:2355!5.06e-07!1;DOID:0060060!5.37e-07!1;DOID:0060061!5.37e-07!1;DOID:8691!5.37e-07!1|ontology_enrichment_disease_v019=DOID:630;4.83e-18;1!DOID:0050177;4.83e-18;1!DOID:0050427;4.83e-18;1|ontology_enrichment_disease_v019_2=DOID:630,4.44e-18,1;DOID:0050177,4.44e-18,1;DOID:0050427,4.44e-18,1|ontology_enrichment_uberon=UBERON:0000178!4.09e-13!15;UBERON:0000179!4.09e-13!15;UBERON:0000463!4.09e-13!15;UBERON:0004177!8.60e-13!7;UBERON:0002106!1.49e-08!3;UBERON:0004854!1.49e-08!3;UBERON:0009034!1.49e-08!3;UBERON:0002095!1.49e-08!3;UBERON:0004782!1.49e-08!3;UBERON:0003281!1.49e-08!3;UBERON:0009664!1.49e-08!3;UBERON:0002296!1.49e-08!3;UBERON:0005602!1.49e-08!3;UBERON:0001179!1.49e-08!3;UBERON:0006293!1.49e-08!3;UBERON:0002193!9.10e-07!112|ontology_enrichment_uberon_v019=UBERON:0002331;2.78e-15;10!UBERON:0000178;2.11e-10;15!UBERON:0000179;2.11e-10;15!UBERON:0000463;2.11e-10;15!UBERON:0002390;2.50e-08;32!UBERON:0002106;8.15e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0002331,2.71e-15,10;UBERON:0000358,2.71e-15,10;UBERON:0000307,2.71e-15,10;UBERON:0000091,2.71e-15,10;UBERON:0000087,2.71e-15,10;UBERON:0007010,2.71e-15,10;UBERON:0007806,2.71e-15,10;UBERON:0008780,2.71e-15,10;UBERON:0005728,2.71e-15,10;UBERON:0000178,2.07e-10,15;UBERON:0000179,2.07e-10,15;UBERON:0000463,2.07e-10,15;UBERON:0002106,8.62e-07,3;UBERON:0004854,8.62e-07,3;UBERON:0009034,8.62e-07,3;UBERON:0002095,8.62e-07,3;UBERON:0004782,8.62e-07,3;UBERON:0003281,8.62e-07,3;UBERON:0009664,8.62e-07,3;UBERON:0002296,8.62e-07,3;UBERON:0005602,8.62e-07,3;UBERON:0001179,8.62e-07,3;UBERON:0006293,8.62e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.94699419778693,10.5088754495931,10.9407986026014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0.238231775457789,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,1.23084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,1.77912677208373,1.11207545051853,1.56632924258183,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788662062837943,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76205998859206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790446527591777,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.11776494143022,2.25870228532717,2.9441770966052,0,0,0,0.59996218756479,0,0.861074898304078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C36 | |||
|description=CAGE_peak_at_chr15:52671674..52671696,- | |||
|id=chr15:52671674..52671696,- | |||
|ontology_enrichment_celltype=CL:0000945!7.80e-27!24;CL:0000826!7.80e-27!24;CL:0000838!6.32e-16!52;CL:0000542!1.42e-15!53;CL:0000051!1.42e-15!53;CL:0000453!2.90e-11!5;CL:0000080!2.66e-09!6;CL:0000988!2.95e-09!182;CL:0000738!3.10e-09!140;CL:0002087!1.69e-07!119;CL:0002032!2.78e-07!165;CL:0000837!2.78e-07!165;CL:0002031!4.43e-07!124;CL:0000037!7.71e-07!172;CL:0000566!7.71e-07!172;CL:0000946!8.98e-07!1;CL:0000786!8.98e-07!1;CL:0000980!8.98e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0000453;2.22e-30;5!CL:0000945;1.81e-17;24!CL:0000990;3.25e-17;8!CL:0000451;3.30e-14;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,2.12e-30,5;CL:0000945,1.81e-17,24;CL:0000826,1.81e-17,24;CL:0000990,3.16e-17,8;CL:0000451,3.23e-14,10;CL:0000988,2.16e-10,177;CL:0000838,4.38e-08,52;CL:0000542,6.23e-08,53;CL:0000051,6.23e-08,53;CL:0000738,3.33e-07,136 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060058!3.16e-09!10;DOID:630!2.50e-07!1;DOID:0050177!2.50e-07!1;DOID:0050427!2.50e-07!1;DOID:4960!4.25e-07!1;DOID:0070004!4.25e-07!1;DOID:2355!5.06e-07!1;DOID:0060060!5.37e-07!1;DOID:0060061!5.37e-07!1;DOID:8691!5.37e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:630;4.83e-18;1!DOID:0050177;4.83e-18;1!DOID:0050427;4.83e-18;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,4.44e-18,1;DOID:0050177,4.44e-18,1;DOID:0050427,4.44e-18,1 | |||
|ontology_enrichment_uberon=UBERON:0000178!4.09e-13!15;UBERON:0000179!4.09e-13!15;UBERON:0000463!4.09e-13!15;UBERON:0004177!8.60e-13!7;UBERON:0002106!1.49e-08!3;UBERON:0004854!1.49e-08!3;UBERON:0009034!1.49e-08!3;UBERON:0002095!1.49e-08!3;UBERON:0004782!1.49e-08!3;UBERON:0003281!1.49e-08!3;UBERON:0009664!1.49e-08!3;UBERON:0002296!1.49e-08!3;UBERON:0005602!1.49e-08!3;UBERON:0001179!1.49e-08!3;UBERON:0006293!1.49e-08!3;UBERON:0002193!9.10e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;2.78e-15;10!UBERON:0000178;2.11e-10;15!UBERON:0000179;2.11e-10;15!UBERON:0000463;2.11e-10;15!UBERON:0002390;2.50e-08;32!UBERON:0002106;8.15e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,2.71e-15,10;UBERON:0000358,2.71e-15,10;UBERON:0000307,2.71e-15,10;UBERON:0000091,2.71e-15,10;UBERON:0000087,2.71e-15,10;UBERON:0007010,2.71e-15,10;UBERON:0007806,2.71e-15,10;UBERON:0008780,2.71e-15,10;UBERON:0005728,2.71e-15,10;UBERON:0000178,2.07e-10,15;UBERON:0000179,2.07e-10,15;UBERON:0000463,2.07e-10,15;UBERON:0002106,8.62e-07,3;UBERON:0004854,8.62e-07,3;UBERON:0009034,8.62e-07,3;UBERON:0002095,8.62e-07,3;UBERON:0004782,8.62e-07,3;UBERON:0003281,8.62e-07,3;UBERON:0009664,8.62e-07,3;UBERON:0002296,8.62e-07,3;UBERON:0005602,8.62e-07,3;UBERON:0001179,8.62e-07,3;UBERON:0006293,8.62e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.94699419778693,10.5088754495931,10.9407986026014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0.238231775457789,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,1.23084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,1.77912677208373,1.11207545051853,1.56632924258183,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788662062837943,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76205998859206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790446527591777,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.11776494143022,2.25870228532717,2.9441770966052,0,0,0,0.59996218756479,0,0.861074898304078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.375935671919414,0,2.09876427442351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129177819672012,0.0620747142958579,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,3.8468219076388 | |||
|short_description=p@chr15:52671674..52671696,- | |||
}} |
Revision as of 07:27, 11 September 2013
Short description: | p@chr15:52671674..52671696, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:52671674..52671696, - |
Coexpression cluster: | C36_B_b_splenic_plasma_xeroderma_adrenal_Burkitt |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 2.12e-30 | 5 |
lymphocyte of B lineage | 1.81e-17 | 24 |
pro-B cell | 1.81e-17 | 24 |
conventional dendritic cell | 3.16e-17 | 8 |
dendritic cell | 3.23e-14 | 10 |
hematopoietic cell | 2.16e-10 | 177 |
lymphoid lineage restricted progenitor cell | 4.38e-08 | 52 |
lymphocyte | 6.23e-08 | 53 |
common lymphoid progenitor | 6.23e-08 | 53 |
leukocyte | 3.33e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 2.71e-15 | 10 |
blastocyst | 2.71e-15 | 10 |
blastula | 2.71e-15 | 10 |
bilaminar disc | 2.71e-15 | 10 |
inner cell mass | 2.71e-15 | 10 |
cleaving embryo | 2.71e-15 | 10 |
connecting stalk | 2.71e-15 | 10 |
inner cell mass derived epiblast | 2.71e-15 | 10 |
extraembryonic mesoderm | 2.71e-15 | 10 |
blood | 2.07e-10 | 15 |
haemolymphatic fluid | 2.07e-10 | 15 |
organism substance | 2.07e-10 | 15 |
spleen | 8.62e-07 | 3 |
gastrointestinal system mesentery | 8.62e-07 | 3 |
stomach region | 8.62e-07 | 3 |
mesentery | 8.62e-07 | 3 |
gastrointestinal system serosa | 8.62e-07 | 3 |
mesentery of stomach | 8.62e-07 | 3 |
gut mesentery | 8.62e-07 | 3 |
dorsal mesentery | 8.62e-07 | 3 |
dorsal mesogastrium | 8.62e-07 | 3 |
peritoneal cavity | 8.62e-07 | 3 |
spleen primordium | 8.62e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 4.44e-18 | 1 |
monogenic disease | 4.44e-18 | 1 |
xeroderma pigmentosum | 4.44e-18 | 1 |
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