FFCP PHASE1:Hg19::chr15:63789978..63789983,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C2|description=CAGE_peak_at_chr15:63789978..63789983,-|id=chr15:63789978..63789983,-|ontology_enrichment_celltype=CL:0002057!7.72e-74!42;CL:0000860!3.90e-68!45;CL:0000766!1.03e-52!76;CL:0002009!3.27e-45!65;CL:0002194!1.82e-44!63;CL:0000576!1.82e-44!63;CL:0000040!1.82e-44!63;CL:0000559!1.82e-44!63;CL:0000738!6.00e-41!140;CL:0000557!1.80e-40!71;CL:0000839!5.87e-39!70;CL:0002087!1.12e-34!119;CL:0000763!2.37e-33!112;CL:0000049!2.37e-33!112;CL:0000037!1.75e-30!172;CL:0000566!1.75e-30!172;CL:0002031!2.57e-29!124;CL:0002032!4.57e-28!165;CL:0000837!4.57e-28!165;CL:0000988!5.65e-28!182;CL:0002393!1.67e-19!9;CL:0002397!1.67e-19!9;CL:0000094!2.80e-15!8;CL:0000081!9.38e-11!11;CL:0000775!4.72e-09!3;CL:0000842!5.41e-08!3;CL:0000134!3.17e-07!358;CL:0000875!3.41e-07!3;CL:0002396!3.41e-07!3;CL:0002320!7.67e-07!365|ontology_enrichment_celltype_v019=CL:0000860;4.04e-35;33!CL:0002057;4.04e-35;33!CL:0000473;5.39e-23;39!CL:0000234;5.39e-23;39!CL:0000576;1.50e-21;48!CL:0000775;3.47e-20;3!CL:0000094;3.85e-20;8!CL:0000766;4.36e-16;69!CL:0000081;1.37e-14;11!CL:0000771;6.25e-14;2!CL:0000763;7.64e-09;100!CL:0000226;7.90e-09;3!CL:0000842;7.90e-09;3!CL:0000738;4.44e-07;136|ontology_enrichment_celltype_v019_2=CL:0000860,3.00e-37,42;CL:0002057,3.00e-37,42;CL:0000766,1.32e-35,72;CL:0000473,3.69e-32,48;CL:0000234,3.69e-32,48;CL:0002194,4.95e-25,59;CL:0000576,4.95e-25,59;CL:0000040,4.95e-25,59;CL:0000559,4.95e-25,59;CL:0002009,4.12e-24,61;CL:0000763,2.31e-22,108;CL:0000049,2.31e-22,108;CL:0000839,4.72e-22,66;CL:0000557,1.12e-21,67;CL:0000738,1.42e-20,136;CL:0000775,3.47e-20,3;CL:0000094,3.86e-20,8;CL:0000037,9.20e-16,168;CL:0000988,1.01e-14,177;CL:0000081,1.37e-14,11;CL:0002087,1.66e-14,115;CL:0000771,6.26e-14,2;CL:0002032,1.43e-13,161;CL:0000837,1.43e-13,161;CL:0002031,1.14e-10,120;CL:0000226,7.91e-09,3;CL:0000842,7.91e-09,3|ontology_enrichment_development_v019=CL:0002057;9.22e-25;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!3.09e-55!102;UBERON:0003061!3.09e-55!102;UBERON:0002193!2.90e-51!112;UBERON:0002371!1.09e-34!80;UBERON:0001474!1.67e-31!86;UBERON:0002405!7.54e-28!115;UBERON:0004765!3.29e-25!101;UBERON:0001434!3.29e-25!101;UBERON:0003081!2.96e-21!216;UBERON:0000178!5.18e-19!15;UBERON:0000179!5.18e-19!15;UBERON:0000463!5.18e-19!15;UBERON:0002204!6.03e-12!167|ontology_enrichment_uberon_v019=UBERON:0000178;1.11e-39;15!UBERON:0000179;1.11e-39;15!UBERON:0000463;1.11e-39;15!UBERON:0002390;3.89e-17;32!UBERON:0002193;2.27e-12;42!UBERON:0000029;3.10e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.09e-39,15;UBERON:0000179,1.09e-39,15;UBERON:0000463,1.09e-39,15;UBERON:0002390,2.69e-39,98;UBERON:0003061,2.69e-39,98;UBERON:0002193,3.72e-38,108;UBERON:0002371,9.77e-19,76;UBERON:0001474,3.94e-17,82;UBERON:0002405,1.04e-16,93;UBERON:0003081,2.16e-16,203;UBERON:0004765,2.55e-15,90;UBERON:0001434,1.84e-13,100;UBERON:0000926,1.06e-08,315;UBERON:0004120,1.06e-08,315;UBERON:0006603,1.06e-08,315;UBERON:0000029,2.66e-07,1;UBERON:0002204,9.48e-07,167|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0.464448369948228,0,0,0,0,0,0,1.10799081706375,1.00272223735071,0.868043482863407,0,0,0,2.03557534291391,2.26725566213286,3.39617685662943,0.697287110717054,0.411167888021826,0.929119112685311,0.863077176966451,1.0246428261164,1.41889337933151,0.344745680736619,0,1.35426486594342,0.941211697713023,1.09162460023138,0.898893937780338,0.918251677112708,0.641858054152187,0.639337125799041,0.659702600373432,0.797854630486527,1.27867425159808,0,0.56738522469114,0,1.50749199154046,0.521482918420201,2.17188844705117,0,1.84138817993782,1.89877432464531,0.422510572623884,0.637812899895131,0.838634582033504,1.01095768031846,1.80212271409808,1.28580469357664,0.285012743741249,0.59675003159727,0.182664153764634,0,0,0,0.853460445133014,0,0,0,0,0,0,0.382273228125229,0,0,0,0.393419540227666,0,0.411202997999018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.7670626154095,11.6334079244498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0.256686072559497,0,0,0,0,0,31.4582950057817,14.9580729602012,27.3514238867783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,1.50999940573032,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_at_chr15:63789978..63789983,- | |||
|id=chr15:63789978..63789983,- | |||
|ontology_enrichment_celltype=CL:0002057!7.72e-74!42;CL:0000860!3.90e-68!45;CL:0000766!1.03e-52!76;CL:0002009!3.27e-45!65;CL:0002194!1.82e-44!63;CL:0000576!1.82e-44!63;CL:0000040!1.82e-44!63;CL:0000559!1.82e-44!63;CL:0000738!6.00e-41!140;CL:0000557!1.80e-40!71;CL:0000839!5.87e-39!70;CL:0002087!1.12e-34!119;CL:0000763!2.37e-33!112;CL:0000049!2.37e-33!112;CL:0000037!1.75e-30!172;CL:0000566!1.75e-30!172;CL:0002031!2.57e-29!124;CL:0002032!4.57e-28!165;CL:0000837!4.57e-28!165;CL:0000988!5.65e-28!182;CL:0002393!1.67e-19!9;CL:0002397!1.67e-19!9;CL:0000094!2.80e-15!8;CL:0000081!9.38e-11!11;CL:0000775!4.72e-09!3;CL:0000842!5.41e-08!3;CL:0000134!3.17e-07!358;CL:0000875!3.41e-07!3;CL:0002396!3.41e-07!3;CL:0002320!7.67e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.04e-35;33!CL:0002057;4.04e-35;33!CL:0000473;5.39e-23;39!CL:0000234;5.39e-23;39!CL:0000576;1.50e-21;48!CL:0000775;3.47e-20;3!CL:0000094;3.85e-20;8!CL:0000766;4.36e-16;69!CL:0000081;1.37e-14;11!CL:0000771;6.25e-14;2!CL:0000763;7.64e-09;100!CL:0000226;7.90e-09;3!CL:0000842;7.90e-09;3!CL:0000738;4.44e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.00e-37,42;CL:0002057,3.00e-37,42;CL:0000766,1.32e-35,72;CL:0000473,3.69e-32,48;CL:0000234,3.69e-32,48;CL:0002194,4.95e-25,59;CL:0000576,4.95e-25,59;CL:0000040,4.95e-25,59;CL:0000559,4.95e-25,59;CL:0002009,4.12e-24,61;CL:0000763,2.31e-22,108;CL:0000049,2.31e-22,108;CL:0000839,4.72e-22,66;CL:0000557,1.12e-21,67;CL:0000738,1.42e-20,136;CL:0000775,3.47e-20,3;CL:0000094,3.86e-20,8;CL:0000037,9.20e-16,168;CL:0000988,1.01e-14,177;CL:0000081,1.37e-14,11;CL:0002087,1.66e-14,115;CL:0000771,6.26e-14,2;CL:0002032,1.43e-13,161;CL:0000837,1.43e-13,161;CL:0002031,1.14e-10,120;CL:0000226,7.91e-09,3;CL:0000842,7.91e-09,3 | |||
|ontology_enrichment_development_v019=CL:0002057;9.22e-25;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.09e-55!102;UBERON:0003061!3.09e-55!102;UBERON:0002193!2.90e-51!112;UBERON:0002371!1.09e-34!80;UBERON:0001474!1.67e-31!86;UBERON:0002405!7.54e-28!115;UBERON:0004765!3.29e-25!101;UBERON:0001434!3.29e-25!101;UBERON:0003081!2.96e-21!216;UBERON:0000178!5.18e-19!15;UBERON:0000179!5.18e-19!15;UBERON:0000463!5.18e-19!15;UBERON:0002204!6.03e-12!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.11e-39;15!UBERON:0000179;1.11e-39;15!UBERON:0000463;1.11e-39;15!UBERON:0002390;3.89e-17;32!UBERON:0002193;2.27e-12;42!UBERON:0000029;3.10e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.09e-39,15;UBERON:0000179,1.09e-39,15;UBERON:0000463,1.09e-39,15;UBERON:0002390,2.69e-39,98;UBERON:0003061,2.69e-39,98;UBERON:0002193,3.72e-38,108;UBERON:0002371,9.77e-19,76;UBERON:0001474,3.94e-17,82;UBERON:0002405,1.04e-16,93;UBERON:0003081,2.16e-16,203;UBERON:0004765,2.55e-15,90;UBERON:0001434,1.84e-13,100;UBERON:0000926,1.06e-08,315;UBERON:0004120,1.06e-08,315;UBERON:0006603,1.06e-08,315;UBERON:0000029,2.66e-07,1;UBERON:0002204,9.48e-07,167 | |||
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|short_description=p@chr15:63789978..63789983,- | |||
}} |
Revision as of 07:47, 11 September 2013
Short description: | p@chr15:63789978..63789983, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:63789978..63789983, - |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.00e-37 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.00e-37 | 42 |
myeloid leukocyte | 1.32e-35 | 72 |
defensive cell | 3.69e-32 | 48 |
phagocyte | 3.69e-32 | 48 |
monopoietic cell | 4.95e-25 | 59 |
monocyte | 4.95e-25 | 59 |
monoblast | 4.95e-25 | 59 |
promonocyte | 4.95e-25 | 59 |
macrophage dendritic cell progenitor | 4.12e-24 | 61 |
myeloid cell | 2.31e-22 | 108 |
common myeloid progenitor | 2.31e-22 | 108 |
myeloid lineage restricted progenitor cell | 4.72e-22 | 66 |
granulocyte monocyte progenitor cell | 1.12e-21 | 67 |
leukocyte | 1.42e-20 | 136 |
neutrophil | 3.47e-20 | 3 |
granulocyte | 3.86e-20 | 8 |
hematopoietic stem cell | 9.20e-16 | 168 |
hematopoietic cell | 1.01e-14 | 177 |
blood cell | 1.37e-14 | 11 |
nongranular leukocyte | 1.66e-14 | 115 |
eosinophil | 6.26e-14 | 2 |
hematopoietic oligopotent progenitor cell | 1.43e-13 | 161 |
hematopoietic multipotent progenitor cell | 1.43e-13 | 161 |
hematopoietic lineage restricted progenitor cell | 1.14e-10 | 120 |
single nucleate cell | 7.91e-09 | 3 |
mononuclear cell | 7.91e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 1.09e-39 | 15 |
haemolymphatic fluid | 1.09e-39 | 15 |
organism substance | 1.09e-39 | 15 |
hematopoietic system | 2.69e-39 | 98 |
blood island | 2.69e-39 | 98 |
hemolymphoid system | 3.72e-38 | 108 |
bone marrow | 9.77e-19 | 76 |
bone element | 3.94e-17 | 82 |
immune system | 1.04e-16 | 93 |
lateral plate mesoderm | 2.16e-16 | 203 |
skeletal element | 2.55e-15 | 90 |
skeletal system | 1.84e-13 | 100 |
mesoderm | 1.06e-08 | 315 |
mesoderm-derived structure | 1.06e-08 | 315 |
presumptive mesoderm | 1.06e-08 | 315 |
lymph node | 2.66e-07 | 1 |
musculoskeletal system | 9.48e-07 | 167 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.