FFCP PHASE1:Hg19::chr16:1730358..1730369,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=90861|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=14137|TSSclassifier=S|UniProt=A6NGP5|association_with_transcript=0bp_to_ENST00000382710_5end|coexpression_cluster_id=C81|description=CAGE_peak_4_at_HN1L_5end|id=chr16:1730358..1730369,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0008947;1.42e-09;29|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.35e-23!115;UBERON:0002298!8.71e-18!8;UBERON:0001049!1.05e-13!57;UBERON:0005068!1.05e-13!57;UBERON:0006241!1.05e-13!57;UBERON:0007135!1.05e-13!57;UBERON:0000341!3.70e-13!2;UBERON:0003127!4.42e-13!2;UBERON:0002616!4.05e-11!59;UBERON:0003076!2.13e-09!15;UBERON:0003057!2.13e-09!15;UBERON:0000955!4.77e-09!69;UBERON:0006238!4.77e-09!69;UBERON:0001896!6.40e-09!3;UBERON:0005290!6.40e-09!3;UBERON:0010096!6.40e-09!3;UBERON:0001017!1.10e-08!82;UBERON:0006331!1.75e-08!3;UBERON:0000988!2.03e-08!3;UBERON:0003075!2.66e-08!86;UBERON:0007284!2.66e-08!86;UBERON:0005743!3.53e-08!86;UBERON:0004733!6.97e-08!12;UBERON:0002028!6.97e-08!12;UBERON:0007277!6.97e-08!12;UBERON:0002346!7.91e-08!90;UBERON:0000153!1.05e-07!129;UBERON:0007811!1.05e-07!129;UBERON:0002171!2.23e-07!1;UBERON:0006518!2.23e-07!1;UBERON:0008949!2.23e-07!1;UBERON:0000101!2.23e-07!1;UBERON:0002167!2.23e-07!1;UBERON:0002780!2.71e-07!41;UBERON:0001890!2.71e-07!41;UBERON:0006240!2.71e-07!41;UBERON:0004732!2.78e-07!13;UBERON:0001301!3.01e-07!1;UBERON:0000073!3.40e-07!94;UBERON:0001016!3.40e-07!94;UBERON:0003080!4.24e-07!42;UBERON:0002336!5.78e-07!1;UBERON:0001018!5.78e-07!1;UBERON:0002473!5.78e-07!1;UBERON:0005340!5.78e-07!1;UBERON:0002316!5.78e-07!1;UBERON:0003544!5.78e-07!1;UBERON:0001020!5.78e-07!1;UBERON:0005970!5.78e-07!1;UBERON:0002437!5.78e-07!1;UBERON:0002038!6.88e-07!1;UBERON:0009661!6.88e-07!1;UBERON:0006834!7.29e-07!1;UBERON:0002372!9.18e-07!1;UBERON:0001961!9.18e-07!1;UBERON:0001744!9.18e-07!1;UBERON:0001735!9.18e-07!1;UBERON:0001882!9.73e-07!1;UBERON:0005403!9.73e-07!1|ontology_enrichment_uberon_v019=UBERON:0003127;1.33e-15;2!UBERON:0000341;1.66e-15;2!UBERON:0001896;1.09e-10;3!UBERON:0005290;1.09e-10;3|ontology_enrichment_uberon_v019_2=UBERON:0003127,1.33e-15,2;UBERON:0000341,1.54e-15,2;UBERON:0001896,9.90e-11,3;UBERON:0005290,9.90e-11,3;UBERON:0010096,9.90e-11,3;UBERON:0005178,2.93e-08,34;UBERON:0002224,2.93e-08,34;UBERON:0005181,4.84e-08,35;UBERON:0008947,1.86e-07,38;UBERON:0003258,1.86e-07,38|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.753150406214233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0.437299999980979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202203398942031,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0,0,2.13574825135389,8.48903247538196,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,1.72022758707021,0,0.310482014706917,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20336525358812,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0.227662191351298,0.0887023701626388,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,2.34557380091079,0.714193294391221,0,0,0,0,0.202117188958219,0.217716747896961,0,0.0673520530145875,7.38738715544566,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,0,0|short_description=p4@HN1L}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=90861 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14137 | |||
|TSSclassifier=S | |||
|UniProt=A6NGP5 | |||
|association_with_transcript=0bp_to_ENST00000382710_5end | |||
|coexpression_cluster_id=C81 | |||
|description=CAGE_peak_4_at_HN1L_5end | |||
|id=chr16:1730358..1730369,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.42e-09;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0003127;1.33e-15;2!UBERON:0000341;1.66e-15;2!UBERON:0001896;1.09e-10;3!UBERON:0005290;1.09e-10;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,1.33e-15,2;UBERON:0000341,1.54e-15,2;UBERON:0001896,9.90e-11,3;UBERON:0005290,9.90e-11,3;UBERON:0010096,9.90e-11,3;UBERON:0005178,2.93e-08,34;UBERON:0002224,2.93e-08,34;UBERON:0005181,4.84e-08,35;UBERON:0008947,1.86e-07,38;UBERON:0003258,1.86e-07,38 | |||
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|short_description=p4@HN1L | |||
}} |
Revision as of 09:27, 11 September 2013
Short description: | p4@HN1L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_HN1L_5end |
Coexpression cluster: | C81_trachea_salivary_throat_aorta_eye_submaxillary_parotid |
Association with transcript: | 0bp_to_ENST00000382710_5end |
EntrezGene: | HN1L |
HGNC: | 14137 |
UniProt: | A6NGP5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 1.33e-15 | 2 |
throat | 1.54e-15 | 2 |
medulla oblongata | 9.90e-11 | 3 |
myelencephalon | 9.90e-11 | 3 |
future myelencephalon | 9.90e-11 | 3 |
thoracic cavity element | 2.93e-08 | 34 |
thoracic cavity | 2.93e-08 | 34 |
thoracic segment organ | 4.84e-08 | 35 |
respiratory primordium | 1.86e-07 | 38 |
endoderm of foregut | 1.86e-07 | 38 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.