FFCP PHASE1:Hg19::chr16:58019055..58019111,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=374739|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=33745|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_BX647108_5end|description=CAGE_peak_1_at_TEPP_5end|id=chr16:58019055..58019111,+|ontology_enrichment_celltype=CL:0002368!6.00e-09!13;CL:0000115!8.85e-07!35|ontology_enrichment_celltype_v019=CL:0002368;1.70e-17;13!CL:0002076;1.40e-11;42!CL:0002202;2.43e-11;9!CL:0002632;2.43e-11;9!CL:1000746;6.58e-08;7!CL:1000612;6.58e-08;7!CL:0000244;8.10e-08;4!CL:0000731;8.10e-08;4|ontology_enrichment_celltype_v019_2=CL:0002368,2.24e-17,13;CL:0002076,3.47e-14,42;CL:0002202,3.49e-11,9;CL:0002632,3.49e-11,9;CL:0000223,1.69e-10,58;CL:0000066,1.01e-09,253;CL:1000746,8.42e-08,7;CL:1000612,8.42e-08,7;CL:0000244,1.02e-07,4;CL:0000731,1.02e-07,4|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.35e-10!115;UBERON:0000119!1.67e-08!312;UBERON:0000483!3.78e-08!309;UBERON:0000153!1.37e-07!129;UBERON:0007811!1.37e-07!129;UBERON:0004121!2.93e-07!169;UBERON:0000924!3.12e-07!173;UBERON:0006601!3.12e-07!173;UBERON:0006554!3.97e-07!44;UBERON:0000033!9.41e-07!123;UBERON:0001008!9.76e-07!45|ontology_enrichment_uberon_v019=UBERON:0000074;6.58e-08;7!UBERON:0001229;6.58e-08;7!UBERON:0007196;1.57e-07;15!UBERON:0001558;1.57e-07;15|ontology_enrichment_uberon_v019_2=UBERON:0005103,6.49e-09,8;UBERON:0000083,6.49e-09,8;UBERON:0009201,6.49e-09,8;UBERON:0006553,6.49e-09,8;UBERON:0003074,6.49e-09,8;UBERON:0003060,6.49e-09,8;UBERON:0004876,7.13e-08,11;UBERON:0010532,8.42e-08,7;UBERON:0000074,8.42e-08,7;UBERON:0001229,8.42e-08,7;UBERON:0001230,8.42e-08,7;UBERON:0003220,8.42e-08,7;UBERON:0005749,8.42e-08,7;UBERON:0004199,8.42e-08,7;UBERON:0004209,8.42e-08,7;UBERON:0004198,8.42e-08,7;UBERON:0000080,8.85e-08,9;UBERON:0002120,8.85e-08,9;UBERON:0004875,8.85e-08,9;UBERON:0005721,8.85e-08,9;UBERON:0005754,8.85e-08,9;UBERON:0007297,8.85e-08,9;UBERON:0007196,2.08e-07,15;UBERON:0001558,2.08e-07,15|phase1_expression=0,0,0,0,0,0,0,0,0,1.22866968250754,9.76921635161399,1.09220686065086,0,0.123766352960047,0.331397375727916,0.672325146451775,0,0,0,0.123121058076788,1.63200552995402,0,0,0.273748850145768,0.251085279189606,0,0,0,0.786728553697808,0.383829398097213,0.154816123316076,3.67768489791571,3.0120591877825,3.69754010166788,0,0,0.587200878669695,0.553995408531877,0,0.217010870715852,0.223915474239924,0.32389366601898,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0.376484679085209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0.569212969109448,0,1.52909291250092,1.32171328579026,0,0.526768169550154,0.590129310341499,2.75107533924415,1.02800749499755,0,0.977766799900771,1.89379122293893,1.94826728407911,0,0.589211814949674,0.664601683750863,0.541607727530031,0.128091319725675,0,0,0,0,1.33457906845854,1.07016331235885,2.09071047609954,0.339928028092699,0.766440987203842,0.34362744548263,0,0.318565414324097,0,0,1.35517607169996,1.53583933385302,0,0,0,1.00803371612366,0.802320587350522,1.59306844271079,0,0,0.383587685530591,0,0,0,0,0,0.378139268656271,0.443458794925128,0,0.982343066232845,5.46442932438813,8.15725774125745,0,0,0,0,0,0,0.79504962946682,0.860234595106124,0.694281003215189,1.13061588384802,2.93649605346934,1.10047216776027,0.417989933073621,0,0,0,3.22263453687318,0,1.70843440283719,0.367663080345869,2.43042584364528,0,0,0.900891843866578,0,0.949265659568129,2.38162267109529,0,0,9.15797509499322,0,0.12663051166458,0,0,0,1.12135520028461,0,0,0,0.269421344139376,0.163461903113459,0.151357427644931,0.576175924479999,0,0,0,0,0.23486899728753,0.971237666208789,0.140450806702248,0,0,0,0,0,0,0,0.673344455816265,0.375355559615893,0.277064115484183,0,0,0,0.113432183160021,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,1.01736355386293,2.12586938479627,5.45492241181669,3.44165514466805,0.609868530647977,1.72288698817931,1.85910308591229,1.45125477021519,1.26160425437814,1.82488679537915,0,1.28648187638577,0,0,0,0,0,0,0,0,0,0,0,0,2.95262181849859,0,0.4115740113314,0,0,0,0,0,0,1.54411029268673,2.52425656439839,0,0.603173834469785,1.01847289674383,0,1.03993478527958,0,1.15930404975077,0.234817388471643,0.577465791044295,1.85194205030644,1.14152491340759,0,0,0,0,0.148631162288728,0.93733833986777,14.9504094096985,6.66342957039216,1.43293636324557,3.48760726216754,0.766765358330422,0.492663237895943,0.352193736052904,0.621984346622316,1.44119953416961,0.50496973370552,0.380987365753014,0,0,3.4214489204541,0.308482478109971,0,0,0.336393253036082,0.43596006883328,0.2933531432838,0,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.499864955910285,0,0,0,0.239624855491583,0,0,0,0.205476322550383,0,0,0.197030760201927,0.431255149719035,0.513372145118994,0,0,0,1.17261385734044,1.91381625495949,0,0,0,0.12269149171914,0,0.542530047399471,0.415941723061614,0.356857977594324,0.315404830067869,0.35142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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=374739 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=33745 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_BX647108_5end | |||
|description=CAGE_peak_1_at_TEPP_5end | |||
|id=chr16:58019055..58019111,+ | |||
|ontology_enrichment_celltype=CL:0002368!6.00e-09!13;CL:0000115!8.85e-07!35 | |||
|ontology_enrichment_celltype_v019=CL:0002368;1.70e-17;13!CL:0002076;1.40e-11;42!CL:0002202;2.43e-11;9!CL:0002632;2.43e-11;9!CL:1000746;6.58e-08;7!CL:1000612;6.58e-08;7!CL:0000244;8.10e-08;4!CL:0000731;8.10e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,2.24e-17,13;CL:0002076,3.47e-14,42;CL:0002202,3.49e-11,9;CL:0002632,3.49e-11,9;CL:0000223,1.69e-10,58;CL:0000066,1.01e-09,253;CL:1000746,8.42e-08,7;CL:1000612,8.42e-08,7;CL:0000244,1.02e-07,4;CL:0000731,1.02e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.35e-10!115;UBERON:0000119!1.67e-08!312;UBERON:0000483!3.78e-08!309;UBERON:0000153!1.37e-07!129;UBERON:0007811!1.37e-07!129;UBERON:0004121!2.93e-07!169;UBERON:0000924!3.12e-07!173;UBERON:0006601!3.12e-07!173;UBERON:0006554!3.97e-07!44;UBERON:0000033!9.41e-07!123;UBERON:0001008!9.76e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0000074;6.58e-08;7!UBERON:0001229;6.58e-08;7!UBERON:0007196;1.57e-07;15!UBERON:0001558;1.57e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005103,6.49e-09,8;UBERON:0000083,6.49e-09,8;UBERON:0009201,6.49e-09,8;UBERON:0006553,6.49e-09,8;UBERON:0003074,6.49e-09,8;UBERON:0003060,6.49e-09,8;UBERON:0004876,7.13e-08,11;UBERON:0010532,8.42e-08,7;UBERON:0000074,8.42e-08,7;UBERON:0001229,8.42e-08,7;UBERON:0001230,8.42e-08,7;UBERON:0003220,8.42e-08,7;UBERON:0005749,8.42e-08,7;UBERON:0004199,8.42e-08,7;UBERON:0004209,8.42e-08,7;UBERON:0004198,8.42e-08,7;UBERON:0000080,8.85e-08,9;UBERON:0002120,8.85e-08,9;UBERON:0004875,8.85e-08,9;UBERON:0005721,8.85e-08,9;UBERON:0005754,8.85e-08,9;UBERON:0007297,8.85e-08,9;UBERON:0007196,2.08e-07,15;UBERON:0001558,2.08e-07,15 | |||
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| |||
|short_description=p1@TEPP | |||
}} |
Revision as of 10:57, 11 September 2013
Short description: | p1@TEPP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_TEPP_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_BX647108_5end |
EntrezGene: | TEPP |
HGNC: | 33745 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 2.24e-17 | 13 |
endo-epithelial cell | 3.47e-14 | 42 |
epithelial cell of tracheobronchial tree | 3.49e-11 | 9 |
epithelial cell of lower respiratory tract | 3.49e-11 | 9 |
endodermal cell | 1.69e-10 | 58 |
epithelial cell | 1.01e-09 | 253 |
glomerular cell | 8.42e-08 | 7 |
kidney corpuscule cell | 8.42e-08 | 7 |
transitional epithelial cell | 1.02e-07 | 4 |
urothelial cell | 1.02e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
mesonephric epithelium | 6.49e-09 | 8 |
mesonephric tubule | 6.49e-09 | 8 |
nephric duct | 6.49e-09 | 8 |
renal duct | 6.49e-09 | 8 |
mesonephric duct | 6.49e-09 | 8 |
pronephric duct | 6.49e-09 | 8 |
urogenital ridge | 7.13e-08 | 11 |
primitive nephron | 8.42e-08 | 7 |
renal glomerulus | 8.42e-08 | 7 |
renal corpuscle | 8.42e-08 | 7 |
glomerular capsule | 8.42e-08 | 7 |
metanephric mesenchyme | 8.42e-08 | 7 |
glomerular tuft | 8.42e-08 | 7 |
S-shaped body | 8.42e-08 | 7 |
renal vesicle | 8.42e-08 | 7 |
comma-shaped body | 8.42e-08 | 7 |
mesonephros | 8.85e-08 | 9 |
pronephros | 8.85e-08 | 9 |
nephrogenic cord | 8.85e-08 | 9 |
pronephric mesoderm | 8.85e-08 | 9 |
rostral part of nephrogenic cord | 8.85e-08 | 9 |
presumptive pronephric mesoderm | 8.85e-08 | 9 |
tracheobronchial tree | 2.08e-07 | 15 |
lower respiratory tract | 2.08e-07 | 15 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.