FFCP PHASE1:Hg19::chr16:66620833..66620903,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=146225|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=19173|TSSclassifier=S|UniProt=|association_with_transcript=21bp_to_ENST00000532362_5end|coexpression_cluster_id=C2|description=CAGE_peak_2_at_CMTM2_5end|id=chr16:66620833..66620903,+|ontology_enrichment_celltype=CL:0002057!5.28e-51!42;CL:0000860!1.06e-46!45;CL:0000766!4.55e-36!76;CL:0000738!3.65e-29!140;CL:0002194!6.20e-29!63;CL:0000576!6.20e-29!63;CL:0000040!6.20e-29!63;CL:0000559!6.20e-29!63;CL:0002009!1.14e-27!65;CL:0002087!1.76e-25!119;CL:0000839!7.81e-25!70;CL:0000557!2.58e-24!71;CL:0000763!4.19e-24!112;CL:0000049!4.19e-24!112;CL:0000037!6.09e-24!172;CL:0000566!6.09e-24!172;CL:0002032!1.13e-22!165;CL:0000837!1.13e-22!165;CL:0000988!1.44e-21!182;CL:0002031!1.78e-20!124;CL:0000094!2.35e-14!8;CL:0000081!6.76e-10!11;CL:0002393!1.73e-07!9;CL:0002397!1.73e-07!9;CL:0000775!8.21e-07!3|ontology_enrichment_celltype_v019=CL:0000860;1.27e-49;33!CL:0002057;1.27e-49;33!CL:0000473;6.07e-35;39!CL:0000234;6.07e-35;39!CL:0000576;2.74e-29;48!CL:0000766;1.15e-20;69!CL:0000094;2.70e-19;8!CL:0000081;1.03e-13;11!CL:0002087;3.73e-12;104!CL:0000763;1.31e-11;100!CL:0000775;5.45e-11;3!CL:0000738;1.25e-09;136!CL:0000771;5.68e-08;2!CL:0000988;9.23e-08;177!CL:0000236;1.52e-07;13|ontology_enrichment_celltype_v019_2=CL:0000860,1.47e-51,42;CL:0002057,1.47e-51,42;CL:0000766,3.05e-44,72;CL:0000473,4.05e-44,48;CL:0000234,4.05e-44,48;CL:0000738,5.32e-39,136;CL:0002194,1.03e-33,59;CL:0000576,1.03e-33,59;CL:0000040,1.03e-33,59;CL:0000559,1.03e-33,59;CL:0002087,1.64e-32,115;CL:0002009,2.25e-32,61;CL:0002032,1.94e-29,161;CL:0000837,1.94e-29,161;CL:0000839,2.24e-29,66;CL:0000037,2.39e-29,168;CL:0002031,7.65e-29,120;CL:0000557,7.89e-29,67;CL:0000988,2.92e-27,177;CL:0000763,1.86e-26,108;CL:0000049,1.86e-26,108;CL:0000094,2.18e-19,8;CL:0000081,8.86e-14,11;CL:0000775,5.46e-11,3;CL:0000771,5.68e-08,2;CL:0000134,5.73e-08,354;CL:0002320,1.32e-07,361;CL:0000236,4.90e-07,14|ontology_enrichment_development_v019=CL:0002057;2.79e-38;42!CL:0000049;5.17e-10;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!3.47e-33!102;UBERON:0003061!3.47e-33!102;UBERON:0002193!3.23e-30!112;UBERON:0002371!3.01e-20!80;UBERON:0007023!1.64e-19!115;UBERON:0001474!5.03e-18!86;UBERON:0002405!4.98e-16!115;UBERON:0000178!1.67e-15!15;UBERON:0000179!1.67e-15!15;UBERON:0000463!1.67e-15!15;UBERON:0004765!1.12e-13!101;UBERON:0001434!1.12e-13!101;UBERON:0003081!9.20e-10!216|ontology_enrichment_uberon_v019=UBERON:0000178;2.00e-20;15!UBERON:0000179;2.00e-20;15!UBERON:0000463;2.00e-20;15!UBERON:0002390;2.24e-09;32|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.72e-39,98;UBERON:0003061,4.72e-39,98;UBERON:0002193,1.30e-36,108;UBERON:0002371,1.48e-24,76;UBERON:0001474,3.15e-22,82;UBERON:0002405,5.21e-22,93;UBERON:0000178,1.99e-20,15;UBERON:0000179,1.99e-20,15;UBERON:0000463,1.99e-20,15;UBERON:0004765,1.31e-19,90;UBERON:0001434,6.30e-17,100;UBERON:0003081,1.09e-14,203;UBERON:0002204,4.14e-08,167;UBERON:0002384,4.08e-07,371|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.93364276848904,1.53531759238885,0.928896739896456,0,0,0,0,0,0,0.553995408531877,0.601633342410425,1.30206522429511,0,0,0,4.50734540216651,1.51150377475524,8.24785808038575,2.55671940596253,0.822335776043652,1.23882548358041,3.16461631554365,0.768482119587302,4.02019790810595,3.7922024881028,0.645484683583826,2.70852973188684,3.38836211176688,1.09162460023138,5.8428105955722,4.89734227793444,0,3.19668562899521,3.62836430205388,1.19678194572979,5.54092175692502,2.03146467040009,0.56738522469114,2.4912889959823,2.51248665256743,0.521482918420201,3.25783267057675,4.23779651843358,0.368277635987565,4.43047342417238,0.211255286311942,1.06302149982522,1.46761051855863,4.26848798356681,4.50530678524519,3.37523732063868,0,0,0.547992461293902,1.75996244461323,3.82297027883492,0,4.69403244823158,1.60158394814405,1.14950487990897,5.94940385506376,0.954053754535364,0,0,0,2.64342657158052,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,2.54852331459277,0,0,1.50575119077773,0,4.99722906209383,4.73554504088034,1.64225599384209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,231.933534687471,279.201790186794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,143.060341573912,191.463333890576,191.459967207448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,6.90285442619574,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=146225 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19173 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=21bp_to_ENST00000532362_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_2_at_CMTM2_5end | |||
|id=chr16:66620833..66620903,+ | |||
|ontology_enrichment_celltype=CL:0002057!5.28e-51!42;CL:0000860!1.06e-46!45;CL:0000766!4.55e-36!76;CL:0000738!3.65e-29!140;CL:0002194!6.20e-29!63;CL:0000576!6.20e-29!63;CL:0000040!6.20e-29!63;CL:0000559!6.20e-29!63;CL:0002009!1.14e-27!65;CL:0002087!1.76e-25!119;CL:0000839!7.81e-25!70;CL:0000557!2.58e-24!71;CL:0000763!4.19e-24!112;CL:0000049!4.19e-24!112;CL:0000037!6.09e-24!172;CL:0000566!6.09e-24!172;CL:0002032!1.13e-22!165;CL:0000837!1.13e-22!165;CL:0000988!1.44e-21!182;CL:0002031!1.78e-20!124;CL:0000094!2.35e-14!8;CL:0000081!6.76e-10!11;CL:0002393!1.73e-07!9;CL:0002397!1.73e-07!9;CL:0000775!8.21e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.27e-49;33!CL:0002057;1.27e-49;33!CL:0000473;6.07e-35;39!CL:0000234;6.07e-35;39!CL:0000576;2.74e-29;48!CL:0000766;1.15e-20;69!CL:0000094;2.70e-19;8!CL:0000081;1.03e-13;11!CL:0002087;3.73e-12;104!CL:0000763;1.31e-11;100!CL:0000775;5.45e-11;3!CL:0000738;1.25e-09;136!CL:0000771;5.68e-08;2!CL:0000988;9.23e-08;177!CL:0000236;1.52e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.47e-51,42;CL:0002057,1.47e-51,42;CL:0000766,3.05e-44,72;CL:0000473,4.05e-44,48;CL:0000234,4.05e-44,48;CL:0000738,5.32e-39,136;CL:0002194,1.03e-33,59;CL:0000576,1.03e-33,59;CL:0000040,1.03e-33,59;CL:0000559,1.03e-33,59;CL:0002087,1.64e-32,115;CL:0002009,2.25e-32,61;CL:0002032,1.94e-29,161;CL:0000837,1.94e-29,161;CL:0000839,2.24e-29,66;CL:0000037,2.39e-29,168;CL:0002031,7.65e-29,120;CL:0000557,7.89e-29,67;CL:0000988,2.92e-27,177;CL:0000763,1.86e-26,108;CL:0000049,1.86e-26,108;CL:0000094,2.18e-19,8;CL:0000081,8.86e-14,11;CL:0000775,5.46e-11,3;CL:0000771,5.68e-08,2;CL:0000134,5.73e-08,354;CL:0002320,1.32e-07,361;CL:0000236,4.90e-07,14 | |||
|ontology_enrichment_development_v019=CL:0002057;2.79e-38;42!CL:0000049;5.17e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.47e-33!102;UBERON:0003061!3.47e-33!102;UBERON:0002193!3.23e-30!112;UBERON:0002371!3.01e-20!80;UBERON:0007023!1.64e-19!115;UBERON:0001474!5.03e-18!86;UBERON:0002405!4.98e-16!115;UBERON:0000178!1.67e-15!15;UBERON:0000179!1.67e-15!15;UBERON:0000463!1.67e-15!15;UBERON:0004765!1.12e-13!101;UBERON:0001434!1.12e-13!101;UBERON:0003081!9.20e-10!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.00e-20;15!UBERON:0000179;2.00e-20;15!UBERON:0000463;2.00e-20;15!UBERON:0002390;2.24e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.72e-39,98;UBERON:0003061,4.72e-39,98;UBERON:0002193,1.30e-36,108;UBERON:0002371,1.48e-24,76;UBERON:0001474,3.15e-22,82;UBERON:0002405,5.21e-22,93;UBERON:0000178,1.99e-20,15;UBERON:0000179,1.99e-20,15;UBERON:0000463,1.99e-20,15;UBERON:0004765,1.31e-19,90;UBERON:0001434,6.30e-17,100;UBERON:0003081,1.09e-14,203;UBERON:0002204,4.14e-08,167;UBERON:0002384,4.08e-07,371 | |||
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|short_description=p2@CMTM2 | |||
}} |
Revision as of 11:05, 11 September 2013
Short description: | p2@CMTM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_CMTM2_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 21bp_to_ENST00000532362_5end |
EntrezGene: | CMTM2 |
HGNC: | 19173 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.47e-51 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.47e-51 | 42 |
myeloid leukocyte | 3.05e-44 | 72 |
defensive cell | 4.05e-44 | 48 |
phagocyte | 4.05e-44 | 48 |
leukocyte | 5.32e-39 | 136 |
monopoietic cell | 1.03e-33 | 59 |
monocyte | 1.03e-33 | 59 |
monoblast | 1.03e-33 | 59 |
promonocyte | 1.03e-33 | 59 |
nongranular leukocyte | 1.64e-32 | 115 |
macrophage dendritic cell progenitor | 2.25e-32 | 61 |
hematopoietic oligopotent progenitor cell | 1.94e-29 | 161 |
hematopoietic multipotent progenitor cell | 1.94e-29 | 161 |
myeloid lineage restricted progenitor cell | 2.24e-29 | 66 |
hematopoietic stem cell | 2.39e-29 | 168 |
hematopoietic lineage restricted progenitor cell | 7.65e-29 | 120 |
granulocyte monocyte progenitor cell | 7.89e-29 | 67 |
hematopoietic cell | 2.92e-27 | 177 |
myeloid cell | 1.86e-26 | 108 |
common myeloid progenitor | 1.86e-26 | 108 |
granulocyte | 2.18e-19 | 8 |
blood cell | 8.86e-14 | 11 |
neutrophil | 5.46e-11 | 3 |
eosinophil | 5.68e-08 | 2 |
mesenchymal cell | 5.73e-08 | 354 |
connective tissue cell | 1.32e-07 | 361 |
B cell | 4.90e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.72e-39 | 98 |
blood island | 4.72e-39 | 98 |
hemolymphoid system | 1.30e-36 | 108 |
bone marrow | 1.48e-24 | 76 |
bone element | 3.15e-22 | 82 |
immune system | 5.21e-22 | 93 |
blood | 1.99e-20 | 15 |
haemolymphatic fluid | 1.99e-20 | 15 |
organism substance | 1.99e-20 | 15 |
skeletal element | 1.31e-19 | 90 |
skeletal system | 6.30e-17 | 100 |
lateral plate mesoderm | 1.09e-14 | 203 |
musculoskeletal system | 4.14e-08 | 167 |
connective tissue | 4.08e-07 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.