FFCP PHASE1:Hg19::chr16:67580076..67580092,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C183|description=CAGE_peak_at_chr16:67580076..67580092,+|id=chr16:67580076..67580092,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000817;1.46e-50;1!CL:0002188;3.42e-11;5!CL:1000746;2.26e-08;7!CL:1000612;2.26e-08;7!CL:0000062;7.91e-07;9|ontology_enrichment_celltype_v019_2=CL:0000817,6.76e-18,3;CL:0002188,3.26e-11,5;CL:1000746,2.18e-08,7;CL:1000612,2.18e-08,7|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:12603;5.12e-50;1|ontology_enrichment_disease_v019_2=DOID:12603,6.58e-50,1|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0000074;2.26e-08;7!UBERON:0001229;2.26e-08;7|ontology_enrichment_uberon_v019_2=UBERON:0010532,2.18e-08,7;UBERON:0000074,2.18e-08,7;UBERON:0001229,2.18e-08,7;UBERON:0001230,2.18e-08,7;UBERON:0003220,2.18e-08,7;UBERON:0005749,2.18e-08,7;UBERON:0004199,2.18e-08,7;UBERON:0004209,2.18e-08,7;UBERON:0004198,2.18e-08,7;UBERON:0005103,1.69e-07,8;UBERON:0000083,1.69e-07,8;UBERON:0009201,1.69e-07,8;UBERON:0006553,1.69e-07,8;UBERON:0003074,1.69e-07,8;UBERON:0003060,1.69e-07,8;UBERON:0000080,8.37e-07,9;UBERON:0002120,8.37e-07,9;UBERON:0004875,8.37e-07,9;UBERON:0005721,8.37e-07,9;UBERON:0005754,8.37e-07,9;UBERON:0007297,8.37e-07,9|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0.232429036905685,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0.462985512576611,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27407504055985,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11481905075431,5.91503773203424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0.101998217636322,0,0,0,0,0,0,0.837847203816763,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0.235265819698172,0.936669811613763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0.796191777397232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0.123935764259002,0,0,0.867479195013787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0.235676547101626,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0.129177819672012,0.0620747142958579,0,0.0636471582781649,0.202117188958219,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0|short_description=p@chr16:67580076..67580092,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C183 | |||
|description=CAGE_peak_at_chr16:67580076..67580092,+ | |||
|id=chr16:67580076..67580092,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000817;1.46e-50;1!CL:0002188;3.42e-11;5!CL:1000746;2.26e-08;7!CL:1000612;2.26e-08;7!CL:0000062;7.91e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000817,6.76e-18,3;CL:0002188,3.26e-11,5;CL:1000746,2.18e-08,7;CL:1000612,2.18e-08,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:12603;5.12e-50;1 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,6.58e-50,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000074;2.26e-08;7!UBERON:0001229;2.26e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010532,2.18e-08,7;UBERON:0000074,2.18e-08,7;UBERON:0001229,2.18e-08,7;UBERON:0001230,2.18e-08,7;UBERON:0003220,2.18e-08,7;UBERON:0005749,2.18e-08,7;UBERON:0004199,2.18e-08,7;UBERON:0004209,2.18e-08,7;UBERON:0004198,2.18e-08,7;UBERON:0005103,1.69e-07,8;UBERON:0000083,1.69e-07,8;UBERON:0009201,1.69e-07,8;UBERON:0006553,1.69e-07,8;UBERON:0003074,1.69e-07,8;UBERON:0003060,1.69e-07,8;UBERON:0000080,8.37e-07,9;UBERON:0002120,8.37e-07,9;UBERON:0004875,8.37e-07,9;UBERON:0005721,8.37e-07,9;UBERON:0005754,8.37e-07,9;UBERON:0007297,8.37e-07,9 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0.232429036905685,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0.462985512576611,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27407504055985,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11481905075431,5.91503773203424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0.101998217636322,0,0,0,0,0,0,0.837847203816763,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0.235265819698172,0.936669811613763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0.796191777397232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0.123935764259002,0,0,0.867479195013787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0.235676547101626,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0.129177819672012,0.0620747142958579,0,0.0636471582781649,0.202117188958219,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr16:67580076..67580092,+ | |||
}} |
Revision as of 11:12, 11 September 2013
Short description: | p@chr16:67580076..67580092, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:67580076..67580092, + |
Coexpression cluster: | C183_acute_non_CD34_diffuse_CD133_myeloma_Burkitt |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
precursor B cell | 6.76e-18 | 3 |
glomerular endothelial cell | 3.26e-11 | 5 |
glomerular cell | 2.18e-08 | 7 |
kidney corpuscule cell | 2.18e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
primitive nephron | 2.18e-08 | 7 |
renal glomerulus | 2.18e-08 | 7 |
renal corpuscle | 2.18e-08 | 7 |
glomerular capsule | 2.18e-08 | 7 |
metanephric mesenchyme | 2.18e-08 | 7 |
glomerular tuft | 2.18e-08 | 7 |
S-shaped body | 2.18e-08 | 7 |
renal vesicle | 2.18e-08 | 7 |
comma-shaped body | 2.18e-08 | 7 |
mesonephric epithelium | 1.69e-07 | 8 |
mesonephric tubule | 1.69e-07 | 8 |
nephric duct | 1.69e-07 | 8 |
renal duct | 1.69e-07 | 8 |
mesonephric duct | 1.69e-07 | 8 |
pronephric duct | 1.69e-07 | 8 |
mesonephros | 8.37e-07 | 9 |
pronephros | 8.37e-07 | 9 |
nephrogenic cord | 8.37e-07 | 9 |
pronephric mesoderm | 8.37e-07 | 9 |
rostral part of nephrogenic cord | 8.37e-07 | 9 |
presumptive pronephric mesoderm | 8.37e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 6.58e-50 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.