FFCP PHASE1:Hg19::chr19:14785674..14785685,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=84658|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=23647|TSSclassifier=S|UniProt=E7EW83|association_with_transcript=-18bp_to_ENST00000443157_5end|coexpression_cluster_id=C2|description=CAGE_peak_2_at_EMR3_5end|id=chr19:14785674..14785685,-|ontology_enrichment_celltype=CL:0002057!2.04e-59!42;CL:0000860!1.20e-54!45;CL:0000766!1.72e-48!76;CL:0002009!1.37e-39!65;CL:0002194!4.37e-39!63;CL:0000576!4.37e-39!63;CL:0000040!4.37e-39!63;CL:0000559!4.37e-39!63;CL:0000738!9.32e-39!140;CL:0000839!5.61e-38!70;CL:0000763!1.59e-37!112;CL:0000049!1.59e-37!112;CL:0000557!3.02e-35!71;CL:0000037!1.36e-34!172;CL:0000566!1.36e-34!172;CL:0002032!1.64e-32!165;CL:0000837!1.64e-32!165;CL:0002087!5.24e-32!119;CL:0000988!1.10e-31!182;CL:0002031!8.86e-30!124;CL:0000094!1.61e-17!8;CL:0002393!1.16e-14!9;CL:0002397!1.16e-14!9;CL:0000081!3.06e-12!11;CL:0000775!4.68e-08!3;CL:0000134!9.21e-08!358;CL:0000875!1.28e-07!3;CL:0002396!1.28e-07!3;CL:0002320!2.52e-07!365;CL:0000767!5.86e-07!3;CL:0000842!7.47e-07!3|ontology_enrichment_celltype_v019=CL:0000860;9.78e-38;33!CL:0002057;9.78e-38;33!CL:0000576;1.14e-29;48!CL:0000094;6.59e-28;8!CL:0000473;7.33e-26;39!CL:0000234;7.33e-26;39!CL:0000766;6.57e-25;69!CL:0000081;5.02e-20;11!CL:0000775;3.21e-15;3!CL:0000875;2.57e-14;3!CL:0002396;2.57e-14;3!CL:0000763;3.42e-14;100!CL:0000771;1.27e-10;2!CL:0000738;4.21e-10;136!CL:0002087;7.61e-09;104!CL:0002393;2.47e-07;6!CL:0002397;2.47e-07;6!CL:0000767;9.60e-07;3|ontology_enrichment_celltype_v019_2=CL:0000860,3.46e-58,42;CL:0002057,3.46e-58,42;CL:0000766,2.14e-54,72;CL:0000473,3.59e-50,48;CL:0000234,3.59e-50,48;CL:0002194,5.98e-39,59;CL:0000576,5.98e-39,59;CL:0000040,5.98e-39,59;CL:0000559,5.98e-39,59;CL:0002009,1.68e-37,61;CL:0000839,2.92e-34,66;CL:0000763,5.05e-34,108;CL:0000049,5.05e-34,108;CL:0000557,1.14e-33,67;CL:0000738,1.96e-31,136;CL:0000094,6.11e-28,8;CL:0000037,5.12e-24,168;CL:0002032,1.18e-23,161;CL:0000837,1.18e-23,161;CL:0002087,1.74e-22,115;CL:0000988,2.06e-22,177;CL:0000081,4.75e-20,11;CL:0002031,1.60e-19,120;CL:0002393,1.17e-17,9;CL:0002397,1.17e-17,9;CL:0000775,3.22e-15,3;CL:0000875,2.63e-14,3;CL:0002396,2.63e-14,3;CL:0000771,1.27e-10,2;CL:0000134,1.98e-07,354;CL:0002320,3.84e-07,361;CL:0000767,9.06e-07,3|ontology_enrichment_development_v019=CL:0002057;6.68e-39;42!CL:0000049;3.85e-12;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!2.85e-49!102;UBERON:0003061!2.85e-49!102;UBERON:0002193!4.85e-47!112;UBERON:0002371!5.90e-30!80;UBERON:0001474!4.77e-27!86;UBERON:0002405!1.17e-25!115;UBERON:0004765!2.59e-21!101;UBERON:0001434!2.59e-21!101;UBERON:0000178!1.59e-19!15;UBERON:0000179!1.59e-19!15;UBERON:0000463!1.59e-19!15;UBERON:0003081!3.90e-18!216;UBERON:0002204!5.48e-10!167;UBERON:0007023!2.65e-08!115;UBERON:0002384!3.73e-07!375|ontology_enrichment_uberon_v019=UBERON:0000178;3.93e-29;15!UBERON:0000179;3.93e-29;15!UBERON:0000463;3.93e-29;15!UBERON:0002390;9.35e-12;32|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.79e-47,98;UBERON:0003061,6.79e-47,98;UBERON:0002193,6.97e-42,108;UBERON:0000178,4.00e-29,15;UBERON:0000179,4.00e-29,15;UBERON:0000463,4.00e-29,15;UBERON:0002371,4.82e-29,76;UBERON:0001474,1.62e-26,82;UBERON:0004765,1.14e-23,90;UBERON:0002405,9.98e-23,93;UBERON:0001434,9.54e-21,100;UBERON:0003081,9.05e-19,203;UBERON:0002204,3.36e-10,167;UBERON:0000926,2.16e-09,315;UBERON:0004120,2.16e-09,315;UBERON:0006603,2.16e-09,315;UBERON:0002384,9.45e-07,371|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.04737836752479,0.383829398097213,1.54816123316076,0,0,0,0,0,0,0.553995408531877,0.601633342410425,0,0,0,0,1.45398238779565,1.51150377475524,1.4555043671269,2.09186133215116,0,0.619412741790207,0.863077176966451,1.2808035326455,0.47296445977717,1.72372840368309,0,1.35426486594342,2.07066573496865,1.09162460023138,1.57306439111559,1.83650335422542,1.60464513538047,3.83602275479425,0.659702600373432,0.598390972864896,0.426224750532694,0.580418477257168,0.56738522469114,4.35975574296902,1.7587406567972,0,0.868755378820466,0,1.47311054395026,0.949387162322653,10.5627643155971,5.31510749912609,5.2414661377094,3.59451619668784,2.4028302854641,4.50031642751824,10.2604587746849,7.9566670879636,8.95054353446706,0,1.09227722252426,0,0,0.400395987036012,0,0.661044872784862,0.954053754535364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0.150575119077773,0.255973222308837,1.24930726552346,0.947109008176067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,42.1697335795402,19.3890132074163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0.445893486866185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=84658 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23647 | |||
|TSSclassifier=S | |||
|UniProt=E7EW83 | |||
|association_with_transcript=-18bp_to_ENST00000443157_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_2_at_EMR3_5end | |||
|id=chr19:14785674..14785685,- | |||
|ontology_enrichment_celltype=CL:0002057!2.04e-59!42;CL:0000860!1.20e-54!45;CL:0000766!1.72e-48!76;CL:0002009!1.37e-39!65;CL:0002194!4.37e-39!63;CL:0000576!4.37e-39!63;CL:0000040!4.37e-39!63;CL:0000559!4.37e-39!63;CL:0000738!9.32e-39!140;CL:0000839!5.61e-38!70;CL:0000763!1.59e-37!112;CL:0000049!1.59e-37!112;CL:0000557!3.02e-35!71;CL:0000037!1.36e-34!172;CL:0000566!1.36e-34!172;CL:0002032!1.64e-32!165;CL:0000837!1.64e-32!165;CL:0002087!5.24e-32!119;CL:0000988!1.10e-31!182;CL:0002031!8.86e-30!124;CL:0000094!1.61e-17!8;CL:0002393!1.16e-14!9;CL:0002397!1.16e-14!9;CL:0000081!3.06e-12!11;CL:0000775!4.68e-08!3;CL:0000134!9.21e-08!358;CL:0000875!1.28e-07!3;CL:0002396!1.28e-07!3;CL:0002320!2.52e-07!365;CL:0000767!5.86e-07!3;CL:0000842!7.47e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.78e-38;33!CL:0002057;9.78e-38;33!CL:0000576;1.14e-29;48!CL:0000094;6.59e-28;8!CL:0000473;7.33e-26;39!CL:0000234;7.33e-26;39!CL:0000766;6.57e-25;69!CL:0000081;5.02e-20;11!CL:0000775;3.21e-15;3!CL:0000875;2.57e-14;3!CL:0002396;2.57e-14;3!CL:0000763;3.42e-14;100!CL:0000771;1.27e-10;2!CL:0000738;4.21e-10;136!CL:0002087;7.61e-09;104!CL:0002393;2.47e-07;6!CL:0002397;2.47e-07;6!CL:0000767;9.60e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.46e-58,42;CL:0002057,3.46e-58,42;CL:0000766,2.14e-54,72;CL:0000473,3.59e-50,48;CL:0000234,3.59e-50,48;CL:0002194,5.98e-39,59;CL:0000576,5.98e-39,59;CL:0000040,5.98e-39,59;CL:0000559,5.98e-39,59;CL:0002009,1.68e-37,61;CL:0000839,2.92e-34,66;CL:0000763,5.05e-34,108;CL:0000049,5.05e-34,108;CL:0000557,1.14e-33,67;CL:0000738,1.96e-31,136;CL:0000094,6.11e-28,8;CL:0000037,5.12e-24,168;CL:0002032,1.18e-23,161;CL:0000837,1.18e-23,161;CL:0002087,1.74e-22,115;CL:0000988,2.06e-22,177;CL:0000081,4.75e-20,11;CL:0002031,1.60e-19,120;CL:0002393,1.17e-17,9;CL:0002397,1.17e-17,9;CL:0000775,3.22e-15,3;CL:0000875,2.63e-14,3;CL:0002396,2.63e-14,3;CL:0000771,1.27e-10,2;CL:0000134,1.98e-07,354;CL:0002320,3.84e-07,361;CL:0000767,9.06e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;6.68e-39;42!CL:0000049;3.85e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.85e-49!102;UBERON:0003061!2.85e-49!102;UBERON:0002193!4.85e-47!112;UBERON:0002371!5.90e-30!80;UBERON:0001474!4.77e-27!86;UBERON:0002405!1.17e-25!115;UBERON:0004765!2.59e-21!101;UBERON:0001434!2.59e-21!101;UBERON:0000178!1.59e-19!15;UBERON:0000179!1.59e-19!15;UBERON:0000463!1.59e-19!15;UBERON:0003081!3.90e-18!216;UBERON:0002204!5.48e-10!167;UBERON:0007023!2.65e-08!115;UBERON:0002384!3.73e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.93e-29;15!UBERON:0000179;3.93e-29;15!UBERON:0000463;3.93e-29;15!UBERON:0002390;9.35e-12;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.79e-47,98;UBERON:0003061,6.79e-47,98;UBERON:0002193,6.97e-42,108;UBERON:0000178,4.00e-29,15;UBERON:0000179,4.00e-29,15;UBERON:0000463,4.00e-29,15;UBERON:0002371,4.82e-29,76;UBERON:0001474,1.62e-26,82;UBERON:0004765,1.14e-23,90;UBERON:0002405,9.98e-23,93;UBERON:0001434,9.54e-21,100;UBERON:0003081,9.05e-19,203;UBERON:0002204,3.36e-10,167;UBERON:0000926,2.16e-09,315;UBERON:0004120,2.16e-09,315;UBERON:0006603,2.16e-09,315;UBERON:0002384,9.45e-07,371 | |||
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|short_description=p2@EMR3 | |||
}} |
Revision as of 19:06, 11 September 2013
Short description: | p2@EMR3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_EMR3_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -18bp_to_ENST00000443157_5end |
EntrezGene: | EMR3 |
HGNC: | 23647 |
UniProt: | E7EW83 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.79e-47 | 98 |
blood island | 6.79e-47 | 98 |
hemolymphoid system | 6.97e-42 | 108 |
blood | 4.00e-29 | 15 |
haemolymphatic fluid | 4.00e-29 | 15 |
organism substance | 4.00e-29 | 15 |
bone marrow | 4.82e-29 | 76 |
bone element | 1.62e-26 | 82 |
skeletal element | 1.14e-23 | 90 |
immune system | 9.98e-23 | 93 |
skeletal system | 9.54e-21 | 100 |
lateral plate mesoderm | 9.05e-19 | 203 |
musculoskeletal system | 3.36e-10 | 167 |
mesoderm | 2.16e-09 | 315 |
mesoderm-derived structure | 2.16e-09 | 315 |
presumptive mesoderm | 2.16e-09 | 315 |
connective tissue | 9.45e-07 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.