FFCP PHASE1:Hg19::chr1:109633349..109633422,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=56900 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30187 | |||
|TSSclassifier=S | |||
|UniProt=Q9NRX6,B2RUU9 | |||
|association_with_transcript=0bp_to_ENST00000338272,ENST00000479160,NM_020141,uc001dwn.2,uc009weu.2_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_1_at_TMEM167B_5end | |||
|id=chr1:109633349..109633422,+ | |||
|ontology_enrichment_celltype=CL:0000766!3.31e-27!76;CL:0000738!1.20e-26!140;CL:0002057!1.92e-26!42;CL:0002009!9.36e-23!65;CL:0000860!3.57e-22!45;CL:0000557!3.61e-22!71;CL:0000839!6.76e-22!70;CL:0002194!1.32e-21!63;CL:0000576!1.32e-21!63;CL:0000040!1.32e-21!63;CL:0000559!1.32e-21!63;CL:0002031!1.45e-20!124;CL:0002087!1.89e-19!119;CL:0000037!1.27e-16!172;CL:0000566!1.27e-16!172;CL:0002032!1.60e-15!165;CL:0000837!1.60e-15!165;CL:0000763!2.82e-15!112;CL:0000049!2.82e-15!112;CL:0000988!1.13e-12!182;CL:0000134!3.81e-10!358;CL:0002320!1.01e-09!365;CL:0000048!6.72e-07!430;CL:0000094!7.87e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.40e-20;33!CL:0002057;7.40e-20;33!CL:0000473;4.03e-18;39!CL:0000234;4.03e-18;39!CL:0000576;2.30e-15;48!CL:0000766;6.10e-14;69!CL:0002087;5.79e-07;104!CL:0000094;7.81e-07;8!CL:0000738;9.73e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,4.00e-30,72;CL:0000738,1.82e-28,136;CL:0000473,3.55e-28,48;CL:0000234,3.55e-28,48;CL:0000860,1.92e-26,42;CL:0002057,1.92e-26,42;CL:0002009,1.24e-25,61;CL:0000557,8.38e-25,67;CL:0000839,1.55e-24,66;CL:0002194,1.92e-24,59;CL:0000576,1.92e-24,59;CL:0000040,1.92e-24,59;CL:0000559,1.92e-24,59;CL:0002031,3.24e-22,120;CL:0002087,4.39e-21,115;CL:0000037,9.11e-18,168;CL:0000763,1.03e-16,108;CL:0000049,1.03e-16,108;CL:0002032,1.20e-16,161;CL:0000837,1.20e-16,161;CL:0000988,4.69e-14,177;CL:0000134,2.95e-11,354;CL:0002320,8.45e-11,361;CL:0000048,7.18e-08,427;CL:0000723,3.19e-07,433;CL:0000094,7.87e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;2.68e-19;42 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.51e-20!102;UBERON:0003061!5.51e-20!102;UBERON:0002371!4.32e-19!80;UBERON:0001474!1.64e-17!86;UBERON:0004765!3.73e-17!101;UBERON:0001434!3.73e-17!101;UBERON:0002193!2.69e-16!112;UBERON:0007023!5.51e-14!115;UBERON:0002204!4.11e-10!167;UBERON:0002405!2.01e-09!115;UBERON:0002384!2.45e-09!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.61e-22,98;UBERON:0003061,7.61e-22,98;UBERON:0002371,3.05e-21,76;UBERON:0001474,2.00e-19,82;UBERON:0004765,5.62e-19,90;UBERON:0001434,1.28e-18,100;UBERON:0002193,8.43e-18,108;UBERON:0002405,3.67e-15,93;UBERON:0007023,1.05e-13,114;UBERON:0002204,4.19e-11,167;UBERON:0002384,2.21e-10,371 | |||
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|short_description=p1@TMEM167B | |||
}} |
Revision as of 23:18, 11 September 2013
Short description: | p1@TMEM167B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_TMEM167B_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000338272, ENST00000479160, NM_020141, uc001dwn.2, uc009weu.2_5end |
EntrezGene: | TMEM167B |
HGNC: | 30187 |
UniProt: | Q9NRX6B2RUU9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 4.00e-30 | 72 |
leukocyte | 1.82e-28 | 136 |
defensive cell | 3.55e-28 | 48 |
phagocyte | 3.55e-28 | 48 |
classical monocyte | 1.92e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.92e-26 | 42 |
macrophage dendritic cell progenitor | 1.24e-25 | 61 |
granulocyte monocyte progenitor cell | 8.38e-25 | 67 |
myeloid lineage restricted progenitor cell | 1.55e-24 | 66 |
monopoietic cell | 1.92e-24 | 59 |
monocyte | 1.92e-24 | 59 |
monoblast | 1.92e-24 | 59 |
promonocyte | 1.92e-24 | 59 |
hematopoietic lineage restricted progenitor cell | 3.24e-22 | 120 |
nongranular leukocyte | 4.39e-21 | 115 |
hematopoietic stem cell | 9.11e-18 | 168 |
myeloid cell | 1.03e-16 | 108 |
common myeloid progenitor | 1.03e-16 | 108 |
hematopoietic oligopotent progenitor cell | 1.20e-16 | 161 |
hematopoietic multipotent progenitor cell | 1.20e-16 | 161 |
hematopoietic cell | 4.69e-14 | 177 |
mesenchymal cell | 2.95e-11 | 354 |
connective tissue cell | 8.45e-11 | 361 |
multi fate stem cell | 7.18e-08 | 427 |
somatic stem cell | 3.19e-07 | 433 |
granulocyte | 7.87e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.61e-22 | 98 |
blood island | 7.61e-22 | 98 |
bone marrow | 3.05e-21 | 76 |
bone element | 2.00e-19 | 82 |
skeletal element | 5.62e-19 | 90 |
skeletal system | 1.28e-18 | 100 |
hemolymphoid system | 8.43e-18 | 108 |
immune system | 3.67e-15 | 93 |
adult organism | 1.05e-13 | 114 |
musculoskeletal system | 4.19e-11 | 167 |
connective tissue | 2.21e-10 | 371 |
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