FFCP PHASE1:Hg19::chr1:31229849..31229861,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C325|description=CAGE_peak_at_chr1:31229849..31229861,+|id=chr1:31229849..31229861,+|ontology_enrichment_celltype=CL:0000738!8.65e-65!140;CL:0002057!1.47e-61!42;CL:0000766!3.64e-60!76;CL:0000037!1.73e-57!172;CL:0000566!1.73e-57!172;CL:0000860!8.56e-57!45;CL:0002031!1.11e-54!124;CL:0002032!2.02e-54!165;CL:0000837!2.02e-54!165;CL:0000988!1.90e-53!182;CL:0000557!2.97e-52!71;CL:0002087!6.96e-48!119;CL:0000839!1.26e-47!70;CL:0000763!6.32e-47!112;CL:0000049!6.32e-47!112;CL:0002009!1.27e-45!65;CL:0002194!6.14e-42!63;CL:0000576!6.14e-42!63;CL:0000040!6.14e-42!63;CL:0000559!6.14e-42!63;CL:0000134!5.68e-22!358;CL:0002320!3.14e-21!365;CL:0000219!1.29e-18!390;CL:0000048!1.73e-15!430;CL:0000723!4.81e-15!436;CL:0000034!1.80e-14!444;CL:0002393!1.07e-13!9;CL:0002397!1.07e-13!9;CL:0000094!2.59e-12!8;CL:0002274!1.45e-09!5;CL:0000457!1.45e-09!5;CL:0002191!1.45e-09!5;CL:0000097!1.45e-09!5;CL:0000831!1.45e-09!5;CL:0002028!1.45e-09!5;CL:0000063!1.57e-09!578;CL:0000767!4.09e-09!3;CL:0002371!7.54e-09!591;CL:0000081!1.02e-08!11;CL:0000838!3.06e-08!52;CL:0000623!5.06e-08!3;CL:0000825!5.06e-08!3;CL:0000542!5.11e-08!53;CL:0000051!5.11e-08!53;CL:0000144!2.02e-07!625;CL:0000771!4.37e-07!2|ontology_enrichment_celltype_v019=CL:0000766;1.12e-23;69!CL:0000860;3.19e-23;33!CL:0002057;3.19e-23;33!CL:0000771;8.48e-21;2!CL:0000473;8.12e-20;39!CL:0000234;8.12e-20;39!CL:0000094;1.14e-19;8!CL:0000576;1.45e-18;48!CL:0000097;2.63e-18;5!CL:0002393;1.18e-14;6!CL:0002397;1.18e-14;6!CL:0000081;2.25e-14;11!CL:0000767;1.09e-13;3!CL:0000763;2.65e-13;100!CL:0000163;2.03e-10;9|ontology_enrichment_celltype_v019_2=CL:0000766,3.91e-49,72;CL:0000860,1.73e-35,42;CL:0002057,1.73e-35,42;CL:0000839,1.70e-33,66;CL:0000557,5.74e-33,67;CL:0000763,4.96e-32,108;CL:0000049,4.96e-32,108;CL:0000473,8.23e-31,48;CL:0000234,8.23e-31,48;CL:0000738,9.17e-28,136;CL:0002194,2.95e-24,59;CL:0000576,2.95e-24,59;CL:0000040,2.95e-24,59;CL:0000559,2.95e-24,59;CL:0002009,2.07e-23,61;CL:0002032,4.74e-23,161;CL:0000837,4.74e-23,161;CL:0000037,5.58e-22,168;CL:0000771,8.49e-21,2;CL:0000988,1.00e-20,177;CL:0002031,6.16e-20,120;CL:0000094,8.58e-20,8;CL:0000097,2.63e-18,5;CL:0002028,2.63e-18,5;CL:0000081,1.83e-14,11;CL:0000767,7.42e-14,3;CL:0002087,1.35e-13,115;CL:0000163,2.03e-10,9;CL:0002393,7.78e-10,9;CL:0002397,7.78e-10,9;CL:0000134,6.59e-09,354;CL:0002320,1.13e-08,361;CL:0000219,7.44e-08,386;CL:0000048,7.57e-07,427|ontology_enrichment_development_v019=CL:0002057;5.97e-26;42!CL:0000049;9.98e-07;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!1.08e-47!80;UBERON:0001474!8.52e-46!86;UBERON:0002390!5.84e-41!102;UBERON:0003061!5.84e-41!102;UBERON:0004765!3.37e-39!101;UBERON:0001434!3.37e-39!101;UBERON:0002193!3.19e-36!112;UBERON:0002405!3.12e-33!115;UBERON:0002384!3.23e-20!375;UBERON:0002204!4.55e-19!167;UBERON:0003081!9.82e-16!216|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.81e-29,76;UBERON:0001474,1.42e-26,82;UBERON:0004765,5.05e-24,90;UBERON:0002405,3.53e-23,93;UBERON:0002390,6.97e-22,98;UBERON:0003061,6.97e-22,98;UBERON:0001434,2.12e-21,100;UBERON:0002193,1.20e-19,108;UBERON:0002204,7.44e-12,167;UBERON:0003081,2.66e-09,203;UBERON:0002384,2.34e-08,371|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0.0787107813136792,2.75354993794233,0.383829398097213,1.70297735647684,0,0,0,0.0774672005803016,0,0.587200878669695,1.10799081706375,1.00272223735071,1.30206522429511,0,0,0,0.290796477559129,0,0.485168122375632,1.16214518452842,0.822335776043652,0.929119112685311,1.43846196161075,0.256160706529101,0.945928919554341,1.03423704220986,1.29096936716765,2.70852973188684,0.188242339542605,0.272906150057846,0,1.53041946185451,0.962787081228281,2.55734850319616,0.659702600373432,0.797854630486527,0.852449501065388,1.45104619314292,0,0,1.00499466102697,0.521482918420201,0.868755378820466,0,0.368277635987565,1.58231193720442,0.422510572623884,0.637812899895131,0.419317291016752,0,0.300353785683013,0,0,0,0.182664153764634,0,0.546138611262131,1.77901850772711,0,0.400395987036012,0,0,0.954053754535364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0.383220493601921,0.34362744548263,0,0,0,0,0,0,0,0,0,0.604820229674197,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488124115096339,0,0,0.0892997282840798,0,0,0,0,0,5.27121669744253,7.75560528296651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0.16798212819886,0,0,0,0,0,0.44024217006613,6.012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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C325 | |||
|description=CAGE_peak_at_chr1:31229849..31229861,+ | |||
|id=chr1:31229849..31229861,+ | |||
|ontology_enrichment_celltype=CL:0000738!8.65e-65!140;CL:0002057!1.47e-61!42;CL:0000766!3.64e-60!76;CL:0000037!1.73e-57!172;CL:0000566!1.73e-57!172;CL:0000860!8.56e-57!45;CL:0002031!1.11e-54!124;CL:0002032!2.02e-54!165;CL:0000837!2.02e-54!165;CL:0000988!1.90e-53!182;CL:0000557!2.97e-52!71;CL:0002087!6.96e-48!119;CL:0000839!1.26e-47!70;CL:0000763!6.32e-47!112;CL:0000049!6.32e-47!112;CL:0002009!1.27e-45!65;CL:0002194!6.14e-42!63;CL:0000576!6.14e-42!63;CL:0000040!6.14e-42!63;CL:0000559!6.14e-42!63;CL:0000134!5.68e-22!358;CL:0002320!3.14e-21!365;CL:0000219!1.29e-18!390;CL:0000048!1.73e-15!430;CL:0000723!4.81e-15!436;CL:0000034!1.80e-14!444;CL:0002393!1.07e-13!9;CL:0002397!1.07e-13!9;CL:0000094!2.59e-12!8;CL:0002274!1.45e-09!5;CL:0000457!1.45e-09!5;CL:0002191!1.45e-09!5;CL:0000097!1.45e-09!5;CL:0000831!1.45e-09!5;CL:0002028!1.45e-09!5;CL:0000063!1.57e-09!578;CL:0000767!4.09e-09!3;CL:0002371!7.54e-09!591;CL:0000081!1.02e-08!11;CL:0000838!3.06e-08!52;CL:0000623!5.06e-08!3;CL:0000825!5.06e-08!3;CL:0000542!5.11e-08!53;CL:0000051!5.11e-08!53;CL:0000144!2.02e-07!625;CL:0000771!4.37e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000766;1.12e-23;69!CL:0000860;3.19e-23;33!CL:0002057;3.19e-23;33!CL:0000771;8.48e-21;2!CL:0000473;8.12e-20;39!CL:0000234;8.12e-20;39!CL:0000094;1.14e-19;8!CL:0000576;1.45e-18;48!CL:0000097;2.63e-18;5!CL:0002393;1.18e-14;6!CL:0002397;1.18e-14;6!CL:0000081;2.25e-14;11!CL:0000767;1.09e-13;3!CL:0000763;2.65e-13;100!CL:0000163;2.03e-10;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,3.91e-49,72;CL:0000860,1.73e-35,42;CL:0002057,1.73e-35,42;CL:0000839,1.70e-33,66;CL:0000557,5.74e-33,67;CL:0000763,4.96e-32,108;CL:0000049,4.96e-32,108;CL:0000473,8.23e-31,48;CL:0000234,8.23e-31,48;CL:0000738,9.17e-28,136;CL:0002194,2.95e-24,59;CL:0000576,2.95e-24,59;CL:0000040,2.95e-24,59;CL:0000559,2.95e-24,59;CL:0002009,2.07e-23,61;CL:0002032,4.74e-23,161;CL:0000837,4.74e-23,161;CL:0000037,5.58e-22,168;CL:0000771,8.49e-21,2;CL:0000988,1.00e-20,177;CL:0002031,6.16e-20,120;CL:0000094,8.58e-20,8;CL:0000097,2.63e-18,5;CL:0002028,2.63e-18,5;CL:0000081,1.83e-14,11;CL:0000767,7.42e-14,3;CL:0002087,1.35e-13,115;CL:0000163,2.03e-10,9;CL:0002393,7.78e-10,9;CL:0002397,7.78e-10,9;CL:0000134,6.59e-09,354;CL:0002320,1.13e-08,361;CL:0000219,7.44e-08,386;CL:0000048,7.57e-07,427 | |||
|ontology_enrichment_development_v019=CL:0002057;5.97e-26;42!CL:0000049;9.98e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.08e-47!80;UBERON:0001474!8.52e-46!86;UBERON:0002390!5.84e-41!102;UBERON:0003061!5.84e-41!102;UBERON:0004765!3.37e-39!101;UBERON:0001434!3.37e-39!101;UBERON:0002193!3.19e-36!112;UBERON:0002405!3.12e-33!115;UBERON:0002384!3.23e-20!375;UBERON:0002204!4.55e-19!167;UBERON:0003081!9.82e-16!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.81e-29,76;UBERON:0001474,1.42e-26,82;UBERON:0004765,5.05e-24,90;UBERON:0002405,3.53e-23,93;UBERON:0002390,6.97e-22,98;UBERON:0003061,6.97e-22,98;UBERON:0001434,2.12e-21,100;UBERON:0002193,1.20e-19,108;UBERON:0002204,7.44e-12,167;UBERON:0003081,2.66e-09,203;UBERON:0002384,2.34e-08,371 | |||
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|short_description=p@chr1:31229849..31229861,+ | |||
}} |
Revision as of 05:12, 12 September 2013
Short description: | p@chr1:31229849..31229861, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:31229849..31229861, + |
Coexpression cluster: | C325_Mast_Eosinophils_CD14_immature_Basophils_granulocyte_Natural |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.81e-29 | 76 |
bone element | 1.42e-26 | 82 |
skeletal element | 5.05e-24 | 90 |
immune system | 3.53e-23 | 93 |
hematopoietic system | 6.97e-22 | 98 |
blood island | 6.97e-22 | 98 |
skeletal system | 2.12e-21 | 100 |
hemolymphoid system | 1.20e-19 | 108 |
musculoskeletal system | 7.44e-12 | 167 |
lateral plate mesoderm | 2.66e-09 | 203 |
connective tissue | 2.34e-08 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.