FFCP PHASE1:Hg19::chr20:44521809..44521827,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5476|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9251|TSSclassifier=N|UniProt=|association_with_transcript=209bp_to_ENST00000493522_5end|coexpression_cluster_id=C103|description=CAGE_peak_11_at_CTSA_5end|id=chr20:44521809..44521827,+|ontology_enrichment_celltype=CL:0000838!5.39e-49!52;CL:0000542!7.96e-48!53;CL:0000051!7.96e-48!53;CL:0002087!1.53e-32!119;CL:0000037!1.63e-32!172;CL:0000566!1.63e-32!172;CL:0000738!5.42e-32!140;CL:0000084!5.93e-32!25;CL:0000827!5.93e-32!25;CL:0000791!4.09e-31!18;CL:0000789!4.09e-31!18;CL:0002420!4.09e-31!18;CL:0002419!4.09e-31!18;CL:0000790!4.09e-31!18;CL:0002032!1.22e-30!165;CL:0000837!1.22e-30!165;CL:0002031!2.82e-30!124;CL:0000988!1.10e-29!182;CL:0000625!5.88e-22!11;CL:0000945!2.21e-14!24;CL:0000826!2.21e-14!24;CL:0000624!6.26e-13!6;CL:0000236!1.28e-09!14;CL:0000134!1.62e-07!358;CL:0000898!2.26e-07!3;CL:0002320!4.49e-07!365;CL:0000623!5.47e-07!3;CL:0000825!5.47e-07!3|ontology_enrichment_celltype_v019=CL:0000791;4.95e-59;18!CL:0000789;4.95e-59;18!CL:0002419;4.95e-59;18!CL:0000084;9.96e-53;25!CL:0000625;1.94e-38;11!CL:0000542;4.39e-31;53!CL:0000624;6.69e-26;6!CL:0000898;4.89e-14;3!CL:0000623;1.96e-13;3!CL:0000815;6.75e-10;2!CL:0000792;6.75e-10;2!CL:0002677;6.75e-10;2!CL:0002087;1.57e-07;104|ontology_enrichment_celltype_v019_2=CL:0000791,1.22e-59,18;CL:0000789,1.22e-59,18;CL:0002420,1.22e-59,18;CL:0002419,1.22e-59,18;CL:0000790,1.22e-59,18;CL:0000838,1.65e-54,52;CL:0000542,2.34e-53,53;CL:0000051,2.34e-53,53;CL:0000084,5.62e-53,25;CL:0000827,5.62e-53,25;CL:0000625,1.18e-38,11;CL:0000624,2.42e-26,6;CL:0000738,4.43e-23,136;CL:0002087,1.25e-22,115;CL:0000037,6.70e-22,168;CL:0002032,1.29e-21,161;CL:0000837,1.29e-21,161;CL:0000988,2.10e-20,177;CL:0002031,9.66e-20,120;CL:0000898,3.16e-14,3;CL:0000623,2.15e-13,3;CL:0000825,2.15e-13,3;CL:0000815,4.34e-10,2;CL:0000792,4.34e-10,2;CL:0002677,4.34e-10,2|ontology_enrichment_development_v019=CL:0000790;4.95e-59;18!CL:0000051;4.39e-31;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!7.04e-07!375|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0,0.157421562627358,1.96682138424452,1.15148819429164,0,0,0,0,1.08454080812422,0,0,0,0.601633342410425,0.217010870715852,0,0.647787332037959,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0.272906150057846,0,0,0,0,0,0,0.426224750532694,0.290209238628584,0,0,0,0,0,0.605399502633369,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0.546138611262131,0.889509253863555,0.853460445133014,0.800791974072025,1.14950487990897,0.661044872784862,0.954053754535364,0,1.76171156811282,1.14681968437569,0,0.560508562981536,0,1.57367816091066,1.96505381374582,4.93443597598822,0,1.95553359980154,0.473447805734733,0,1.55974639639243,8.83817722424511,9.08288967792847,8.39491977671548,1.66518715643378,0.390178042679635,0,0.276350017785848,0,0,0.267540828089713,0,0.566546713487831,2.29932296161153,2.06176467289578,2.27717722817553,1.91139248594458,2.60433381542567,6.65316431113862,4.21610333417764,3.58362511232371,1.24930726552346,1.4206635122641,0.821127996921047,3.42731463482045,1.87208137048455,3.47578569318718,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0.324547393654683,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1673383622212,1.2937654491571,1.66845947163673,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,0.647142602455851,0.960548020230999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52927441428475,0,1.42939065274673,0.411362273086194,1.29694662238543,0,0,0,0,0,0,0,0,0.159426272728822,0,0.191505370132367,1.90506224451495,0,1.96558024679421,0,0.47003968731907,2.50634477090067,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0.66614393599564,0,0,0,0,1.00299045849731,0,0,0,0,0,0,0,0,0,0.19924798825107,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04386596391473,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0.106787412567695,0,0,2.48083010905975,3.1617861103671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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5476 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9251 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=209bp_to_ENST00000493522_5end | |||
|coexpression_cluster_id=C103 | |||
|description=CAGE_peak_11_at_CTSA_5end | |||
|id=chr20:44521809..44521827,+ | |||
|ontology_enrichment_celltype=CL:0000838!5.39e-49!52;CL:0000542!7.96e-48!53;CL:0000051!7.96e-48!53;CL:0002087!1.53e-32!119;CL:0000037!1.63e-32!172;CL:0000566!1.63e-32!172;CL:0000738!5.42e-32!140;CL:0000084!5.93e-32!25;CL:0000827!5.93e-32!25;CL:0000791!4.09e-31!18;CL:0000789!4.09e-31!18;CL:0002420!4.09e-31!18;CL:0002419!4.09e-31!18;CL:0000790!4.09e-31!18;CL:0002032!1.22e-30!165;CL:0000837!1.22e-30!165;CL:0002031!2.82e-30!124;CL:0000988!1.10e-29!182;CL:0000625!5.88e-22!11;CL:0000945!2.21e-14!24;CL:0000826!2.21e-14!24;CL:0000624!6.26e-13!6;CL:0000236!1.28e-09!14;CL:0000134!1.62e-07!358;CL:0000898!2.26e-07!3;CL:0002320!4.49e-07!365;CL:0000623!5.47e-07!3;CL:0000825!5.47e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000791;4.95e-59;18!CL:0000789;4.95e-59;18!CL:0002419;4.95e-59;18!CL:0000084;9.96e-53;25!CL:0000625;1.94e-38;11!CL:0000542;4.39e-31;53!CL:0000624;6.69e-26;6!CL:0000898;4.89e-14;3!CL:0000623;1.96e-13;3!CL:0000815;6.75e-10;2!CL:0000792;6.75e-10;2!CL:0002677;6.75e-10;2!CL:0002087;1.57e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.22e-59,18;CL:0000789,1.22e-59,18;CL:0002420,1.22e-59,18;CL:0002419,1.22e-59,18;CL:0000790,1.22e-59,18;CL:0000838,1.65e-54,52;CL:0000542,2.34e-53,53;CL:0000051,2.34e-53,53;CL:0000084,5.62e-53,25;CL:0000827,5.62e-53,25;CL:0000625,1.18e-38,11;CL:0000624,2.42e-26,6;CL:0000738,4.43e-23,136;CL:0002087,1.25e-22,115;CL:0000037,6.70e-22,168;CL:0002032,1.29e-21,161;CL:0000837,1.29e-21,161;CL:0000988,2.10e-20,177;CL:0002031,9.66e-20,120;CL:0000898,3.16e-14,3;CL:0000623,2.15e-13,3;CL:0000825,2.15e-13,3;CL:0000815,4.34e-10,2;CL:0000792,4.34e-10,2;CL:0002677,4.34e-10,2 | |||
|ontology_enrichment_development_v019=CL:0000790;4.95e-59;18!CL:0000051;4.39e-31;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!7.04e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0,0.157421562627358,1.96682138424452,1.15148819429164,0,0,0,0,1.08454080812422,0,0,0,0.601633342410425,0.217010870715852,0,0.647787332037959,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0.272906150057846,0,0,0,0,0,0,0.426224750532694,0.290209238628584,0,0,0,0,0,0.605399502633369,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0.546138611262131,0.889509253863555,0.853460445133014,0.800791974072025,1.14950487990897,0.661044872784862,0.954053754535364,0,1.76171156811282,1.14681968437569,0,0.560508562981536,0,1.57367816091066,1.96505381374582,4.93443597598822,0,1.95553359980154,0.473447805734733,0,1.55974639639243,8.83817722424511,9.08288967792847,8.39491977671548,1.66518715643378,0.390178042679635,0,0.276350017785848,0,0,0.267540828089713,0,0.566546713487831,2.29932296161153,2.06176467289578,2.27717722817553,1.91139248594458,2.60433381542567,6.65316431113862,4.21610333417764,3.58362511232371,1.24930726552346,1.4206635122641,0.821127996921047,3.42731463482045,1.87208137048455,3.47578569318718,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0.324547393654683,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1673383622212,1.2937654491571,1.66845947163673,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,0.647142602455851,0.960548020230999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52927441428475,0,1.42939065274673,0.411362273086194,1.29694662238543,0,0,0,0,0,0,0,0,0.159426272728822,0,0.191505370132367,1.90506224451495,0,1.96558024679421,0,0.47003968731907,2.50634477090067,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0.66614393599564,0,0,0,0,1.00299045849731,0,0,0,0,0,0,0,0,0,0.19924798825107,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04386596391473,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0.106787412567695,0,0,2.48083010905975,3.16178611036711,2.07047417247523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554805861502613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,2.75543967457305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281951753939561,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.0645889098360061,0.186224142887574,0,0,0,0,0,0.875576689189638,0.0717222053926763,0,0,0,0,0,2.34640942403454,0,0,0,0.805095174364105,0.961705476909699 | |||
|short_description=p11@CTSA | |||
}} |
Revision as of 08:45, 12 September 2013
Short description: | p11@CTSA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_CTSA_5end |
Coexpression cluster: | C103_CD4_CD8_Natural_Peripheral_Whole_Neutrophils_Basophils |
Association with transcript: | 209bp_to_ENST00000493522_5end |
EntrezGene: | CTSA |
HGNC: | 9251 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.22e-59 | 18 |
alpha-beta T cell | 1.22e-59 | 18 |
immature T cell | 1.22e-59 | 18 |
mature T cell | 1.22e-59 | 18 |
immature alpha-beta T cell | 1.22e-59 | 18 |
lymphoid lineage restricted progenitor cell | 1.65e-54 | 52 |
lymphocyte | 2.34e-53 | 53 |
common lymphoid progenitor | 2.34e-53 | 53 |
T cell | 5.62e-53 | 25 |
pro-T cell | 5.62e-53 | 25 |
CD8-positive, alpha-beta T cell | 1.18e-38 | 11 |
CD4-positive, alpha-beta T cell | 2.42e-26 | 6 |
leukocyte | 4.43e-23 | 136 |
nongranular leukocyte | 1.25e-22 | 115 |
hematopoietic stem cell | 6.70e-22 | 168 |
hematopoietic oligopotent progenitor cell | 1.29e-21 | 161 |
hematopoietic multipotent progenitor cell | 1.29e-21 | 161 |
hematopoietic cell | 2.10e-20 | 177 |
hematopoietic lineage restricted progenitor cell | 9.66e-20 | 120 |
naive T cell | 3.16e-14 | 3 |
natural killer cell | 2.15e-13 | 3 |
pro-NK cell | 2.15e-13 | 3 |
regulatory T cell | 4.34e-10 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 4.34e-10 | 2 |
naive regulatory T cell | 4.34e-10 | 2 |
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