FFCP PHASE1:Hg19::chr22:19929445..19929457,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10587|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=18155|TSSclassifier=S|UniProt=F5H2M2,Q9NNW7,A4FTY4|association_with_transcript=-86bp_to_ENST00000538798,NM_006440,uc002zql.1,uc002zqm.1,uc002zqn.1,uc002zqo.1,uc002zqp.1,uc002zqr.1,uc010grv.1,uc011ahc.1_5end|description=CAGE_peak_6_at_TXNRD2_5end|id=chr22:19929445..19929457,-|ontology_enrichment_celltype=CL:0000222!3.22e-22!119;CL:0000115!7.06e-14!35;CL:0000220!9.96e-14!246;CL:0002321!2.91e-13!248;CL:0000213!1.17e-12!57;CL:0000215!1.17e-12!57;CL:0000183!1.39e-12!59;CL:0002139!1.39e-12!24;CL:0002078!3.09e-11!44;CL:0000055!4.88e-11!180;CL:0000680!6.35e-11!57;CL:0000056!6.35e-11!57;CL:0000355!6.35e-11!57;CL:0000187!2.52e-10!54;CL:0000144!4.46e-10!625;CL:0000192!7.73e-10!42;CL:0000514!7.73e-10!42;CL:0000071!3.97e-09!18;CL:0002546!3.97e-09!18;CL:0002371!8.61e-09!591;CL:0000393!8.10e-08!60;CL:0000211!8.10e-08!60;CL:0000548!1.52e-07!679;CL:0000004!1.52e-07!679;CL:0000255!1.52e-07!679;CL:0000012!3.84e-07!682;CL:0000359!4.52e-07!32|ontology_enrichment_celltype_v019=CL:0002144;1.73e-16;3!CL:0002139;1.91e-12;24!CL:0000115;1.09e-11;36!CL:0002262;2.03e-11;2!CL:1000398;2.03e-11;2!CL:0000071;1.06e-09;18!CL:0002078;5.81e-08;45!CL:0002592;1.42e-07;3!CL:0000213;1.55e-07;58!CL:0000215;1.55e-07;58|ontology_enrichment_celltype_v019_2=CL:0002144,2.26e-16,3;CL:0000115,4.42e-15,36;CL:0002139,2.58e-12,24;CL:0002078,1.24e-11,45;CL:0002262,1.70e-11,2;CL:1000398,1.70e-11,2;CL:0000222,6.77e-11,121;CL:0000213,2.56e-10,58;CL:0000215,2.56e-10,58;CL:0000071,1.38e-09,18;CL:0002546,1.38e-09,18;CL:0002592,9.88e-08,3|ontology_enrichment_development_v019=CL:0002546;1.06e-09;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002049!4.01e-17!79;UBERON:0007798!4.01e-17!79;UBERON:0000490!2.28e-14!138;UBERON:0000055!5.64e-13!69;UBERON:0000914!8.77e-13!83;UBERON:0002329!8.77e-13!83;UBERON:0003077!8.77e-13!83;UBERON:0003059!8.77e-13!83;UBERON:0007282!8.77e-13!83;UBERON:0009618!8.77e-13!83;UBERON:0007285!8.77e-13!83;UBERON:0004535!1.99e-12!110;UBERON:0005256!2.74e-12!143;UBERON:0001009!7.34e-12!113;UBERON:0001981!1.44e-11!60;UBERON:0007500!1.44e-11!60;UBERON:0004537!1.44e-11!60;UBERON:0006965!1.44e-11!60;UBERON:0004290!7.98e-11!70;UBERON:0001134!1.25e-10!61;UBERON:0002036!1.25e-10!61;UBERON:0003082!1.25e-10!61;UBERON:0002385!9.25e-10!63;UBERON:0001015!9.25e-10!63;UBERON:0000383!9.25e-10!63;UBERON:0003914!2.94e-09!118;UBERON:0004872!3.03e-09!84;UBERON:0001986!3.97e-09!18;UBERON:0004638!3.97e-09!18;UBERON:0004852!3.97e-09!18;UBERON:0000486!4.21e-09!82;UBERON:0002100!7.62e-09!216;UBERON:0000487!2.73e-08!22;UBERON:0000119!7.38e-08!312;UBERON:0001637!7.57e-08!42;UBERON:0003509!7.57e-08!42;UBERON:0004572!7.57e-08!42;UBERON:0000483!7.92e-08!309;UBERON:0006914!3.42e-07!25|ontology_enrichment_uberon_v019=UBERON:0010523;1.73e-16;3!UBERON:0001915;1.73e-16;3!UBERON:0001982;1.73e-16;3!UBERON:0003513;7.67e-12;7!UBERON:0001281;2.03e-11;2!UBERON:0003497;2.03e-11;2!UBERON:0003909;2.03e-11;2!UBERON:0003835;2.03e-11;2!UBERON:0000487;1.35e-10;22!UBERON:0004638;1.06e-09;18!UBERON:0001986;1.06e-09;18!UBERON:0004852;1.06e-09;18!UBERON:0006914;3.26e-09;25!UBERON:0001280;6.89e-08;3!UBERON:0004647;6.89e-08;3!UBERON:0003498;1.42e-07;3!UBERON:0005985;1.42e-07;3!UBERON:0001621;1.42e-07;3!UBERON:0003914;1.49e-07;74!UBERON:0000055;1.60e-07;65!UBERON:0007500;1.69e-07;56!UBERON:0001981;1.69e-07;56!UBERON:0004537;1.69e-07;56!UBERON:0002049;6.88e-07;75!UBERON:0007798;6.88e-07;75|ontology_enrichment_uberon_v019_2=UBERON:0010523,2.26e-16,3;UBERON:0001915,2.26e-16,3;UBERON:0001982,2.26e-16,3;UBERON:0000055,2.13e-13,68;UBERON:0002049,5.18e-13,78;UBERON:0007798,5.18e-13,78;UBERON:0003513,6.99e-12,7;UBERON:0007500,1.07e-11,59;UBERON:0001981,1.07e-11,59;UBERON:0004537,1.07e-11,59;UBERON:0006965,1.07e-11,59;UBERON:0001281,1.70e-11,2;UBERON:0003497,1.70e-11,2;UBERON:0003909,1.70e-11,2;UBERON:0003835,1.70e-11,2;UBERON:0003914,2.76e-11,117;UBERON:0004535,6.28e-11,109;UBERON:0001009,1.56e-10,112;UBERON:0000487,1.78e-10,22;UBERON:0004872,2.15e-10,83;UBERON:0000490,2.85e-10,148;UBERON:0004638,1.38e-09,18;UBERON:0001986,1.38e-09,18;UBERON:0004852,1.38e-09,18;UBERON:0006914,4.15e-09,25;UBERON:0005256,2.98e-08,122;UBERON:0003104,3.33e-08,160;UBERON:0009142,3.33e-08,160;UBERON:0001280,6.14e-08,3;UBERON:0004647,6.14e-08,3;UBERON:0005171,6.14e-08,3;UBERON:0001621,9.88e-08,3;UBERON:0005172,1.16e-07,54;UBERON:0005173,1.16e-07,54;UBERON:0000058,8.59e-07,19;UBERON:0004111,9.40e-07,240|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0,0.872338524100369,0,0,0,0.245733936501509,0.697801167972428,0.436882744260345,0.263766978228454,0.37129905888014,0.662794751455832,0.672325146451775,0,0.730310090387373,0.975865597581014,0,0.204000691244253,0.313454721478088,0,0.136874425072884,0.627713197974014,0,0,0,0,0,0,0,0.30120591877825,0.369754010166788,0.0774672005803016,0,0.293600439334847,0,0.200544447470142,0.434021741431704,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0.209658645508376,0.336985893439485,0.150176892841506,0.32145117339416,0,0,0,1.75996244461323,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0.722878304769133,0.50133791063589,0.144846518960824,0,0.486634870302636,0.378139268656271,0.886917589850256,0.790513071238134,0.327447688744282,0.728590576585084,0,0,0.348259474598534,0,0,0,0,1.39133685156694,0.860234595106124,0.347140501607594,0.56530794192401,0.838998872419812,0.825354125820202,0.417989933073621,1.29208379584664,0.35576626268671,0.66944122552934,1.20848795132744,3.80136052859256,9.76248230192678,0,0.81014194788176,0.892997282840798,0.44905874525234,1.23872628531654,0,0.949265659568129,1.09921046358244,0,0,0.872188104285069,0.496971951695318,0.12663051166458,0.397227542439656,0,0.709336764396714,0,0,1.2333377420858,0,0.404132016209064,0,0.302714855289863,0,0.70296429550139,0,0.570471821544449,0.298897361103602,0.352303495931295,0.161872944368132,0.140450806702248,0.816616685019573,0.368502951935304,0.309977343527296,1.18800285728205,0.247266929278557,0,0,0.168336113954066,0.125118519871964,0.277064115484183,0.438977620880838,0.612975591598039,0.150238058906597,0.226864366320042,0.358779271377724,0,0.635795703478686,0,0.103052529238439,0.257640540045629,0.37223371266318,0.675105328965065,0.292311015483596,0,0.184099797284599,0.484938170456436,0.355009592516614,0.201504196455281,0.169560592310488,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0.928735856063958,0.721879481669586,0.118306800039844,0,0,0.220587945464788,0,0.237270619111097,0.134831308160164,0,0,1.4763109092493,4.20725321410337,1.2347220339942,0,0,1.96565443335525,0.590789906681404,0,0,0.514703430895577,0.329250856225877,0,0,0.0925884451585296,0,2.07986957055916,0,0.115930404975077,0.469634776943287,0.721832238805369,0.925971025153221,2.09279567458058,0,0,0,0.234004265139238,0,0,0.335964256397719,0.425325291727159,0,0,0,0,0,0,0,0,0,0.381988425558278,0,0,0,0.300343057843917,0.571652865261156,0.224262168690721,0,0.1466765716419,0.775630294546667,3.57656445851882,0,0.26593811658487,0,0.257207374262142,0,0.266422179016099,0.714889968290738,0,0,0.325736184293735,1.06617584622764,0,0.301439377059586,0,0.299918973546171,0,0,0,0.718874566474748,0,0,0.289562613335158,0.205476322550383,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0.271265023699736,0,0.178428988797162,0.788512075169673,0.117141414992713,0,0,0,0,0,0.434418072340414,0.783204629850962,0.343143423810856,0,0.215714200818617,0,0,0,0.30239029332968,0,0.306923946576125,0,0.512556597022804,0,0.160853921143607,1.48418066444991,0.154209693802656,0.177561725313127,0.0821271560138091,0.519254429183621,0,0.120859449591622,0.601519410909855,0.0920809889358963,0.114814448164607,0,0.393373244878272,0,0.0770153371044148,0,0,0.105551628892876,0,0.510281115829547,0.431831832204279,10.7959076883203,0.812839312631559,3.51182841698397,0.254876273045038,0,0,0.438519753291869,0,0.256450125116389,0.328014645699706,0,0.103041011647722,0.27470839445503,0.247528499761764,0,0,3.21367859688319,0.580024309752732,0.154048617114644,0.767518373630648,0.413509717453592,0.107420244868274,0.290033387828457,0.170453254832202,0.445160178233687,0,0,0.255225424989168,0,0.929691098594572,0.31481234683064,0.6970372701606,0,0.532306030317022,0,0.55597265731176,0.715624433709956,0.744316738719335,1.58189712359363,0.571890581771475,0.511795582622668,0,0,0.78494864019923,0.179872457583315,0.274537029736055,0.706874414074119,1.41527737101321,1.58510321173008,0,0.975267478179181,0.243713489631284,0,0,0.424216295861138,0,0,1.32687795048244,1.31535265576129,1.73632660280006,0.655894752046633,0,0.92947049429925,0.281695602532241,0.430234056612155,0.589494246078727,1.07001315444375,0.354761064070598,0,0,0.379473173765715,0.349934720244983,0.192444225451024,0,0,0.376575203107117,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0.648473311192717,0,0,0.106824071127473,5.77487913158015,0,0,0,0,0,0.199579371432817,0,0.423347165447766,1.29848776109822,0,0.228234679033192,0,0,0.169291777801603,0,0,0,0.687010689511529,0,0.447352215784832,0.333698283423817,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0.296964680832639,0,0,0.140669416410513,0,0,0,0,0,0.503865495708552,0.306806047506464,0,1.86623752597084,0,0,0,0,0,0,0,0.185536196323703,1.99613798001194,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0.331737779793674,0.591095237907095,0.219385397153973,0,0,0.153900517007594,0.455768223388005,0,0,0.54323685961004,0,0.183195186803725,0,0,0.470940769185074,0.166211681900156,0,0,0,0,0,0.210998064528027,0.163232808159148,0,0,0,0,0,1.48260564340311,0.123563938946503,0.208843899010911,0.067401132980677,0,0,0,0.19566461893209,0.728341138602278,0,0,0,0.379119477770928,1.65355761355942,0.311064574191741,0,0,0,0,0.569219092059585,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10587 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18155 | |||
|TSSclassifier=S | |||
|UniProt=F5H2M2,Q9NNW7,A4FTY4 | |||
|association_with_transcript=-86bp_to_ENST00000538798,NM_006440,uc002zql.1,uc002zqm.1,uc002zqn.1,uc002zqo.1,uc002zqp.1,uc002zqr.1,uc010grv.1,uc011ahc.1_5end | |||
|description=CAGE_peak_6_at_TXNRD2_5end | |||
|id=chr22:19929445..19929457,- | |||
|ontology_enrichment_celltype=CL:0000222!3.22e-22!119;CL:0000115!7.06e-14!35;CL:0000220!9.96e-14!246;CL:0002321!2.91e-13!248;CL:0000213!1.17e-12!57;CL:0000215!1.17e-12!57;CL:0000183!1.39e-12!59;CL:0002139!1.39e-12!24;CL:0002078!3.09e-11!44;CL:0000055!4.88e-11!180;CL:0000680!6.35e-11!57;CL:0000056!6.35e-11!57;CL:0000355!6.35e-11!57;CL:0000187!2.52e-10!54;CL:0000144!4.46e-10!625;CL:0000192!7.73e-10!42;CL:0000514!7.73e-10!42;CL:0000071!3.97e-09!18;CL:0002546!3.97e-09!18;CL:0002371!8.61e-09!591;CL:0000393!8.10e-08!60;CL:0000211!8.10e-08!60;CL:0000548!1.52e-07!679;CL:0000004!1.52e-07!679;CL:0000255!1.52e-07!679;CL:0000012!3.84e-07!682;CL:0000359!4.52e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0002144;1.73e-16;3!CL:0002139;1.91e-12;24!CL:0000115;1.09e-11;36!CL:0002262;2.03e-11;2!CL:1000398;2.03e-11;2!CL:0000071;1.06e-09;18!CL:0002078;5.81e-08;45!CL:0002592;1.42e-07;3!CL:0000213;1.55e-07;58!CL:0000215;1.55e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0002144,2.26e-16,3;CL:0000115,4.42e-15,36;CL:0002139,2.58e-12,24;CL:0002078,1.24e-11,45;CL:0002262,1.70e-11,2;CL:1000398,1.70e-11,2;CL:0000222,6.77e-11,121;CL:0000213,2.56e-10,58;CL:0000215,2.56e-10,58;CL:0000071,1.38e-09,18;CL:0002546,1.38e-09,18;CL:0002592,9.88e-08,3 | |||
|ontology_enrichment_development_v019=CL:0002546;1.06e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!4.01e-17!79;UBERON:0007798!4.01e-17!79;UBERON:0000490!2.28e-14!138;UBERON:0000055!5.64e-13!69;UBERON:0000914!8.77e-13!83;UBERON:0002329!8.77e-13!83;UBERON:0003077!8.77e-13!83;UBERON:0003059!8.77e-13!83;UBERON:0007282!8.77e-13!83;UBERON:0009618!8.77e-13!83;UBERON:0007285!8.77e-13!83;UBERON:0004535!1.99e-12!110;UBERON:0005256!2.74e-12!143;UBERON:0001009!7.34e-12!113;UBERON:0001981!1.44e-11!60;UBERON:0007500!1.44e-11!60;UBERON:0004537!1.44e-11!60;UBERON:0006965!1.44e-11!60;UBERON:0004290!7.98e-11!70;UBERON:0001134!1.25e-10!61;UBERON:0002036!1.25e-10!61;UBERON:0003082!1.25e-10!61;UBERON:0002385!9.25e-10!63;UBERON:0001015!9.25e-10!63;UBERON:0000383!9.25e-10!63;UBERON:0003914!2.94e-09!118;UBERON:0004872!3.03e-09!84;UBERON:0001986!3.97e-09!18;UBERON:0004638!3.97e-09!18;UBERON:0004852!3.97e-09!18;UBERON:0000486!4.21e-09!82;UBERON:0002100!7.62e-09!216;UBERON:0000487!2.73e-08!22;UBERON:0000119!7.38e-08!312;UBERON:0001637!7.57e-08!42;UBERON:0003509!7.57e-08!42;UBERON:0004572!7.57e-08!42;UBERON:0000483!7.92e-08!309;UBERON:0006914!3.42e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0010523;1.73e-16;3!UBERON:0001915;1.73e-16;3!UBERON:0001982;1.73e-16;3!UBERON:0003513;7.67e-12;7!UBERON:0001281;2.03e-11;2!UBERON:0003497;2.03e-11;2!UBERON:0003909;2.03e-11;2!UBERON:0003835;2.03e-11;2!UBERON:0000487;1.35e-10;22!UBERON:0004638;1.06e-09;18!UBERON:0001986;1.06e-09;18!UBERON:0004852;1.06e-09;18!UBERON:0006914;3.26e-09;25!UBERON:0001280;6.89e-08;3!UBERON:0004647;6.89e-08;3!UBERON:0003498;1.42e-07;3!UBERON:0005985;1.42e-07;3!UBERON:0001621;1.42e-07;3!UBERON:0003914;1.49e-07;74!UBERON:0000055;1.60e-07;65!UBERON:0007500;1.69e-07;56!UBERON:0001981;1.69e-07;56!UBERON:0004537;1.69e-07;56!UBERON:0002049;6.88e-07;75!UBERON:0007798;6.88e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010523,2.26e-16,3;UBERON:0001915,2.26e-16,3;UBERON:0001982,2.26e-16,3;UBERON:0000055,2.13e-13,68;UBERON:0002049,5.18e-13,78;UBERON:0007798,5.18e-13,78;UBERON:0003513,6.99e-12,7;UBERON:0007500,1.07e-11,59;UBERON:0001981,1.07e-11,59;UBERON:0004537,1.07e-11,59;UBERON:0006965,1.07e-11,59;UBERON:0001281,1.70e-11,2;UBERON:0003497,1.70e-11,2;UBERON:0003909,1.70e-11,2;UBERON:0003835,1.70e-11,2;UBERON:0003914,2.76e-11,117;UBERON:0004535,6.28e-11,109;UBERON:0001009,1.56e-10,112;UBERON:0000487,1.78e-10,22;UBERON:0004872,2.15e-10,83;UBERON:0000490,2.85e-10,148;UBERON:0004638,1.38e-09,18;UBERON:0001986,1.38e-09,18;UBERON:0004852,1.38e-09,18;UBERON:0006914,4.15e-09,25;UBERON:0005256,2.98e-08,122;UBERON:0003104,3.33e-08,160;UBERON:0009142,3.33e-08,160;UBERON:0001280,6.14e-08,3;UBERON:0004647,6.14e-08,3;UBERON:0005171,6.14e-08,3;UBERON:0001621,9.88e-08,3;UBERON:0005172,1.16e-07,54;UBERON:0005173,1.16e-07,54;UBERON:0000058,8.59e-07,19;UBERON:0004111,9.40e-07,240 | |||
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| |||
|short_description=p6@TXNRD2 | |||
}} |
Revision as of 11:00, 12 September 2013
Short description: | p6@TXNRD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_TXNRD2_5end |
Coexpression cluster: | NA |
Association with transcript: | -86bp_to_ENST00000538798, NM_006440, uc002zql.1, uc002zqm.1, uc002zqn.1, uc002zqo.1, uc002zqp.1, uc002zqr.1, uc010grv.1, uc011ahc.1_5end |
EntrezGene: | TXNRD2 |
HGNC: | 18155 |
UniProt: | F5H2M2Q9NNW7A4FTY4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
capillary endothelial cell | 2.26e-16 | 3 |
endothelial cell | 4.42e-15 | 36 |
endothelial cell of vascular tree | 2.58e-12 | 24 |
meso-epithelial cell | 1.24e-11 | 45 |
endothelial cell of sinusoid | 1.70e-11 | 2 |
endothelial cell of hepatic sinusoid | 1.70e-11 | 2 |
mesodermal cell | 6.77e-11 | 121 |
lining cell | 2.56e-10 | 58 |
barrier cell | 2.56e-10 | 58 |
blood vessel endothelial cell | 1.38e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.38e-09 | 18 |
smooth muscle cell of the coronary artery | 9.88e-08 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.