FFCP PHASE1:Hg19::chr22:39639040..39639057,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr22:39639040..39639057,+|id=chr22:39639040..39639057,+|ontology_enrichment_celltype=CL:0000066!1.19e-27!254;CL:1000497!6.04e-08!18;CL:0002518!6.04e-08!18;CL:0000223!7.43e-07!59|ontology_enrichment_celltype_v019=CL:0002577;8.50e-18;3!CL:0000349;8.49e-10;19!CL:0002621;3.80e-08;3!CL:0002144;6.70e-08;3!CL:0002231;6.70e-08;3!CL:1000746;3.01e-07;7!CL:1000612;3.01e-07;7|ontology_enrichment_celltype_v019_2=CL:0002577,8.11e-18,3;CL:0000066,1.59e-10,253;CL:0000349,1.00e-09,19;CL:0002621,2.97e-08,3;CL:0002144,4.72e-08,3;CL:0002231,8.58e-08,3;CL:1000746,3.75e-07,7;CL:1000612,3.75e-07,7|ontology_enrichment_development_v019=UBERON:0003124;5.12e-07;1!UBERON:0008425;6.41e-07;1|ontology_enrichment_disease=DOID:305!2.63e-14!106;DOID:0050687!2.45e-10!143;DOID:7!3.17e-10!39;DOID:299!2.44e-07!25;DOID:5093!8.52e-07!4;DOID:1612!8.52e-07!4|ontology_enrichment_disease_v019=DOID:5093;1.70e-22;4!DOID:1612;1.70e-22;4|ontology_enrichment_disease_v019_2=DOID:5093,1.38e-22,4;DOID:1612,1.38e-22,4|ontology_enrichment_uberon=UBERON:0006554!3.37e-14!44;UBERON:0001008!1.10e-13!45;UBERON:0000489!9.82e-13!32;UBERON:0002113!1.67e-10!27;UBERON:0003918!1.67e-10!27;UBERON:0005095!1.67e-10!27;UBERON:0007687!1.67e-10!27;UBERON:0005911!1.75e-10!82;UBERON:0005631!2.94e-10!14;UBERON:0000158!2.94e-10!14;UBERON:0005177!4.82e-10!107;UBERON:0009569!1.78e-09!113;UBERON:0004119!2.98e-09!169;UBERON:0000925!2.98e-09!169;UBERON:0006595!2.98e-09!169;UBERON:0004111!7.26e-09!241;UBERON:0005172!2.49e-08!55;UBERON:0005173!2.49e-08!55;UBERON:0000477!2.92e-08!286;UBERON:0000064!4.96e-08!219;UBERON:0003929!9.62e-08!54;UBERON:0003124!1.08e-07!7;UBERON:0003064!3.37e-07!37;UBERON:0001007!4.12e-07!155;UBERON:0001555!4.12e-07!155;UBERON:0007026!4.12e-07!155;UBERON:0006555!5.82e-07!17;UBERON:0005103!5.82e-07!17;UBERON:0000083!5.82e-07!17;UBERON:0009201!5.82e-07!17;UBERON:0004819!5.82e-07!17;UBERON:0006553!5.82e-07!17;UBERON:0003074!5.82e-07!17;UBERON:0003060!5.82e-07!17;UBERON:0000077!6.33e-07!130;UBERON:0001987!6.38e-07!4;UBERON:0004340!6.38e-07!4;UBERON:0002417!8.34e-07!61;UBERON:0000916!8.34e-07!61|ontology_enrichment_uberon_v019=UBERON:0001987;4.32e-23;4!UBERON:0000310;9.69e-14;10!UBERON:0001443;1.82e-12;11!UBERON:0000478;2.60e-10;24!UBERON:0001949;3.80e-08;3!UBERON:0010523;6.70e-08;3!UBERON:0001915;6.70e-08;3!UBERON:0001982;6.70e-08;3!UBERON:0003929;2.11e-07;7!UBERON:0000074;3.01e-07;7!UBERON:0001229;3.01e-07;7!UBERON:0000077;8.33e-07;27|ontology_enrichment_uberon_v019_2=UBERON:0001987,4.36e-23,4;UBERON:0004340,4.36e-23,4;UBERON:0003124,7.96e-20,7;UBERON:0005631,3.27e-18,14;UBERON:0000158,3.27e-18,14;UBERON:0000310,8.54e-14,10;UBERON:0001443,1.62e-12,11;UBERON:0000478,3.07e-10,24;UBERON:0006554,1.46e-09,47;UBERON:0001008,2.51e-09,48;UBERON:0001949,2.97e-08,3;UBERON:0010523,4.72e-08,3;UBERON:0001915,4.72e-08,3;UBERON:0001982,4.72e-08,3;UBERON:0010532,3.75e-07,7;UBERON:0000074,3.75e-07,7;UBERON:0001229,3.75e-07,7;UBERON:0001230,3.75e-07,7;UBERON:0003220,3.75e-07,7;UBERON:0005749,3.75e-07,7;UBERON:0004199,3.75e-07,7;UBERON:0004209,3.75e-07,7;UBERON:0004198,3.75e-07,7|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,1.39560233594486,1.09220686065086,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0,0.0654895377488563,0.728590576585084,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,1.29208379584664,0.71153252537342,1.00416183829401,0.402829317109147,1.52054421143703,1.70843440283719,0.367663080345869,0,0.0892997282840798,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,1.73934767846967,0.272746120590835,2.00763216772303,0,0,0.116193942869518,0,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0,0,0.220587945464788,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,1.22988438543114,0.171567810298526,0,0,0.100528972411631,0.462942225792648,0,0,0,0.115930404975077,0,0.433099343283221,0,0.570762456703795,8.69224837755203,3.43394464837949,0,0,0,0,0.16798212819886,0.141775097242386,0,0,0.383382679165211,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.63753085735511,4.99306318531491,4.83824469327489,0,0,0,0,0,0,0,0,0,0,0,0,1.57117284469109,1.00253235151642,0,0,0,0,0.902399225814824,0.231046011313244,0.784349769176855,0,0.633309773357254,0,0,0,1.54227252690289,0.270946437543853,1.00337954770971,0,0.831076008928724,0.223874754722178,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr22:39639040..39639057,+ | |||
|id=chr22:39639040..39639057,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.19e-27!254;CL:1000497!6.04e-08!18;CL:0002518!6.04e-08!18;CL:0000223!7.43e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002577;8.50e-18;3!CL:0000349;8.49e-10;19!CL:0002621;3.80e-08;3!CL:0002144;6.70e-08;3!CL:0002231;6.70e-08;3!CL:1000746;3.01e-07;7!CL:1000612;3.01e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,8.11e-18,3;CL:0000066,1.59e-10,253;CL:0000349,1.00e-09,19;CL:0002621,2.97e-08,3;CL:0002144,4.72e-08,3;CL:0002231,8.58e-08,3;CL:1000746,3.75e-07,7;CL:1000612,3.75e-07,7 | |||
|ontology_enrichment_development_v019=UBERON:0003124;5.12e-07;1!UBERON:0008425;6.41e-07;1 | |||
|ontology_enrichment_disease=DOID:305!2.63e-14!106;DOID:0050687!2.45e-10!143;DOID:7!3.17e-10!39;DOID:299!2.44e-07!25;DOID:5093!8.52e-07!4;DOID:1612!8.52e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:5093;1.70e-22;4!DOID:1612;1.70e-22;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.38e-22,4;DOID:1612,1.38e-22,4 | |||
|ontology_enrichment_uberon=UBERON:0006554!3.37e-14!44;UBERON:0001008!1.10e-13!45;UBERON:0000489!9.82e-13!32;UBERON:0002113!1.67e-10!27;UBERON:0003918!1.67e-10!27;UBERON:0005095!1.67e-10!27;UBERON:0007687!1.67e-10!27;UBERON:0005911!1.75e-10!82;UBERON:0005631!2.94e-10!14;UBERON:0000158!2.94e-10!14;UBERON:0005177!4.82e-10!107;UBERON:0009569!1.78e-09!113;UBERON:0004119!2.98e-09!169;UBERON:0000925!2.98e-09!169;UBERON:0006595!2.98e-09!169;UBERON:0004111!7.26e-09!241;UBERON:0005172!2.49e-08!55;UBERON:0005173!2.49e-08!55;UBERON:0000477!2.92e-08!286;UBERON:0000064!4.96e-08!219;UBERON:0003929!9.62e-08!54;UBERON:0003124!1.08e-07!7;UBERON:0003064!3.37e-07!37;UBERON:0001007!4.12e-07!155;UBERON:0001555!4.12e-07!155;UBERON:0007026!4.12e-07!155;UBERON:0006555!5.82e-07!17;UBERON:0005103!5.82e-07!17;UBERON:0000083!5.82e-07!17;UBERON:0009201!5.82e-07!17;UBERON:0004819!5.82e-07!17;UBERON:0006553!5.82e-07!17;UBERON:0003074!5.82e-07!17;UBERON:0003060!5.82e-07!17;UBERON:0000077!6.33e-07!130;UBERON:0001987!6.38e-07!4;UBERON:0004340!6.38e-07!4;UBERON:0002417!8.34e-07!61;UBERON:0000916!8.34e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0001987;4.32e-23;4!UBERON:0000310;9.69e-14;10!UBERON:0001443;1.82e-12;11!UBERON:0000478;2.60e-10;24!UBERON:0001949;3.80e-08;3!UBERON:0010523;6.70e-08;3!UBERON:0001915;6.70e-08;3!UBERON:0001982;6.70e-08;3!UBERON:0003929;2.11e-07;7!UBERON:0000074;3.01e-07;7!UBERON:0001229;3.01e-07;7!UBERON:0000077;8.33e-07;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001987,4.36e-23,4;UBERON:0004340,4.36e-23,4;UBERON:0003124,7.96e-20,7;UBERON:0005631,3.27e-18,14;UBERON:0000158,3.27e-18,14;UBERON:0000310,8.54e-14,10;UBERON:0001443,1.62e-12,11;UBERON:0000478,3.07e-10,24;UBERON:0006554,1.46e-09,47;UBERON:0001008,2.51e-09,48;UBERON:0001949,2.97e-08,3;UBERON:0010523,4.72e-08,3;UBERON:0001915,4.72e-08,3;UBERON:0001982,4.72e-08,3;UBERON:0010532,3.75e-07,7;UBERON:0000074,3.75e-07,7;UBERON:0001229,3.75e-07,7;UBERON:0001230,3.75e-07,7;UBERON:0003220,3.75e-07,7;UBERON:0005749,3.75e-07,7;UBERON:0004199,3.75e-07,7;UBERON:0004209,3.75e-07,7;UBERON:0004198,3.75e-07,7 | |||
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|short_description=p@chr22:39639040..39639057,+ | |||
}} |
Revision as of 12:03, 12 September 2013
Short description: | p@chr22:39639040..39639057, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr22:39639040..39639057, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 8.11e-18 | 3 |
epithelial cell | 1.59e-10 | 253 |
extraembryonic cell | 1.00e-09 | 19 |
gingival epithelial cell | 2.97e-08 | 3 |
capillary endothelial cell | 4.72e-08 | 3 |
epithelial cell of prostate | 8.58e-08 | 3 |
glomerular cell | 3.75e-07 | 7 |
kidney corpuscule cell | 3.75e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
placenta | 4.36e-23 | 4 |
allantois | 4.36e-23 | 4 |
chorion | 7.96e-20 | 7 |
extraembryonic membrane | 3.27e-18 | 14 |
membranous layer | 3.27e-18 | 14 |
breast | 8.54e-14 | 10 |
chest | 1.62e-12 | 11 |
extraembryonic structure | 3.07e-10 | 24 |
urinary system structure | 1.46e-09 | 47 |
renal system | 2.51e-09 | 48 |
gingival epithelium | 2.97e-08 | 3 |
microcirculatory vessel | 4.72e-08 | 3 |
endothelium of capillary | 4.72e-08 | 3 |
capillary | 4.72e-08 | 3 |
primitive nephron | 3.75e-07 | 7 |
renal glomerulus | 3.75e-07 | 7 |
renal corpuscle | 3.75e-07 | 7 |
glomerular capsule | 3.75e-07 | 7 |
metanephric mesenchyme | 3.75e-07 | 7 |
glomerular tuft | 3.75e-07 | 7 |
S-shaped body | 3.75e-07 | 7 |
renal vesicle | 3.75e-07 | 7 |
comma-shaped body | 3.75e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.38e-22 | 4 |
breast cancer | 1.38e-22 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.