FFCP PHASE1:Mm9::chr10:117147071..117147088,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=17246|HGNC=|MCL_coexpression_id=1864|UniProt=|association_with_transcript=0bp_to_ENSMUST00000155285,uc007hdl.1_5end|description=CAGE_peak_2_at_Mdm2_5end|id=chr10:117147071..117147088,-|ontology_enrichment_celltype=CL:0000144!1.71e-09!121;CL:0000012!1.71e-09!121;CL:0002371!3.89e-09!118;CL:0000548!4.21e-08!115;CL:0000004!4.21e-08!115;CL:0000255!4.21e-08!115|ontology_enrichment_celltype_v019_2=CL:0000034,1.83e-11,97;CL:0002321,2.68e-11,70;CL:0000219,1.50e-10,54;CL:0000723,1.15e-09,91;CL:0000048,1.15e-09,91;CL:0000107,1.40e-09,9;CL:0000355,1.85e-09,9;CL:0000222,4.31e-08,7;CL:0000680,2.11e-07,6;CL:0000187,2.11e-07,6;CL:0000056,2.11e-07,6;CL:0000333,3.70e-07,10;CL:0000095,3.70e-07,10;CL:0000243,3.70e-07,10;CL:0000123,3.70e-07,10;CL:0000125,3.70e-07,10;CL:0000030,3.70e-07,10;CL:0000339,3.70e-07,10;CL:0002320,6.11e-07,46;CL:0000134,6.11e-07,46|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000010!5.95e-08!11|ontology_enrichment_uberon_v019_2=UBERON:0000010,1.31e-11,11;UBERON:0002410,1.40e-09,9;UBERON:0001134,1.85e-09,9;UBERON:0002036,1.85e-09,9;UBERON:0002385,1.85e-09,9;UBERON:0000486,1.85e-09,9;UBERON:0007503,1.85e-09,9;UBERON:0001015,1.85e-09,9;UBERON:0002329,1.85e-09,9;UBERON:0003082,1.85e-09,9;UBERON:0003059,1.85e-09,9;UBERON:0007282,1.85e-09,9;UBERON:0004290,1.85e-09,9;UBERON:0009618,1.85e-09,9;UBERON:0000383,3.15e-08,10;UBERON:0007524,3.14e-07,11;UBERON:0003077,3.14e-07,11;UBERON:0007285,3.14e-07,11;UBERON:0002204,3.73e-07,32;UBERON:0002384,6.11e-07,46|phase1_expression=0,2.09385244583617,2.27499619694768,5.74682001482977,2.50447864973174,0.16787927191189,0.467225281191051,0,0.563154888606667,0.70219357896598,0.171217968225505,0,0,0,0,0.404950534779652,0,0,0.137114433605739,0,0.510259740906419,1.19149141441062,3.91799683708403,0.95995453676044,0.68822784320151,0.57423196411502,0.86152399231815,0.646413698057667,0,0.504060259519861,0.443461021310609,2.54012269383853,6.76571266343027,15.8481681015439,0,0,0,9.20769587621197,5.4693474116666,5.23523743973798,24.1174910092716,6.83045484958446,7.2826552954673,41.2941562959893,45.2141113239035,46.6208750490671,7.04152209913235,0.872100625521786,4.39372365468944,5.44403717407994,5.5994568650145,4.31257693094915,0,0,0.672187598284928,17.4936416504444,7.16333599846892,44.34779993586,0,0,0,56.2481923234759,14.2287167377782,7.19919773825119,12.8552627133707,4.2628806896766,10.1864037576258,3.45796474789399,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0.131886287730194,0.0914876436024097,0,0,0.56276261003168,0.45839474333043,0,0.142371680799103,0,40.2863348532539,27.130190078336,6.08715426273523,0.860423876981386,19.039197343817,3.77792234146472,0,0.896053774194671,1.26399978118577,2.04516387093669,2.85764605063156,2.82671659608272,0,15.3991772897181,20.3844191765317,21.3320010945999,32.9066382337045,29.6431042605865,26.2872711407687,1.02765491747154,1.55362730188303,0.593768556259299,0,0,0.461230994512117,0,0.940709657085638,0.376999773989026,1.48316980640624,0.289198713839823,0,0.647067399789637,0,0,0,0,0,0.510914110417183,1.43778149407104,1.79970819298022,2.41433431438823,0.299581278809645,0,0,0,0.511430914660661,0,0.162241263067758,0,0.622034853050465,0.505445516867349,0,0.260240885925407,0,0,0.30140963567143,0.204109497453984,0.2562274405697,0.0937017245597288,0,0.215567992932842,0,0.175951124163949,0.219195732427575,0,0.348252166522167,0.61734640922383,0.398068533636986,2.1066395619397,2.57347907114715,3.12579849335152,0,0,0,0.23674473558521,0.196764231747404,0,0.232533944750408,0,0.233530684734339,0,0.656669856316381,0.486412857275134,0.292399974850665,0.439100230582101,0.268412837520744,0.420579897128254,0.102904612379284,2.31293148088659,0.264450566663544,0,0,0.128867461322093,0,0,0,0.949058123089023,0,0,0,0,0,1.51296634912286,1.39398891278057,0.189667900953082,0,0,0.203651327845314,0,0.0701358198903186,0.252946148497029,0.442830443938806,0.627994911365499,1.1105744752962,0.296452627087149,0.500535317148282,0,0,1.01430060694251,1.4470629585145,0.50925170356284,0.287696137450811,0.324270453550071,0.274561413188081,0,0.372140947668503,0,1.01031551178845,1.61457672169721,0,3.14080423283228,0.189491411770485,0,0.169745085775188,1.17345124144251,1.50755631697634,0.952174563544055,3.90267295715598,0.315270288212382,0.664394068946325,0.797273843287435,1.47476983244164,1.55416483679306,1.73578870297814,21.1107797514981,17.4049818821987,0.491764273019036,1.10374698521893,0,0.468846746368813,1.63934945376675,0.252470927204373,21.7700671397217,23.4263246577983,5.81643173878557,14.5770966751057,20.7202766896627,10.7569081699756,18.6212922770451,37.1164939547366,30.4371589018823,0.642642632843614,0,0,0.162886959353576,0.659880491890142,1.32745138339963,0,0,0.188605079755898,0,0,0.258428293168221,0.363533729477506,0,0,0,2.06271086496374,0,0.540183282093931,0,0.428674070063185,0.177340233642274,0.356737635204141,0,0,10.3255551548033,4.2366414172764,0.661585194164886,3.46261131177108,1.93757312035087,1.08563264870681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| ||
|EntrezGene=17246 | |||
|HGNC= | |||
|MCL_coexpression_id=1864 | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000155285,uc007hdl.1_5end | |||
|description=CAGE_peak_2_at_Mdm2_5end | |||
|id=chr10:117147071..117147088,- | |||
|ontology_enrichment_celltype=CL:0000144!1.71e-09!121;CL:0000012!1.71e-09!121;CL:0002371!3.89e-09!118;CL:0000548!4.21e-08!115;CL:0000004!4.21e-08!115;CL:0000255!4.21e-08!115 | |||
|ontology_enrichment_celltype_v019_2=CL:0000034,1.83e-11,97;CL:0002321,2.68e-11,70;CL:0000219,1.50e-10,54;CL:0000723,1.15e-09,91;CL:0000048,1.15e-09,91;CL:0000107,1.40e-09,9;CL:0000355,1.85e-09,9;CL:0000222,4.31e-08,7;CL:0000680,2.11e-07,6;CL:0000187,2.11e-07,6;CL:0000056,2.11e-07,6;CL:0000333,3.70e-07,10;CL:0000095,3.70e-07,10;CL:0000243,3.70e-07,10;CL:0000123,3.70e-07,10;CL:0000125,3.70e-07,10;CL:0000030,3.70e-07,10;CL:0000339,3.70e-07,10;CL:0002320,6.11e-07,46;CL:0000134,6.11e-07,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000010!5.95e-08!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,1.31e-11,11;UBERON:0002410,1.40e-09,9;UBERON:0001134,1.85e-09,9;UBERON:0002036,1.85e-09,9;UBERON:0002385,1.85e-09,9;UBERON:0000486,1.85e-09,9;UBERON:0007503,1.85e-09,9;UBERON:0001015,1.85e-09,9;UBERON:0002329,1.85e-09,9;UBERON:0003082,1.85e-09,9;UBERON:0003059,1.85e-09,9;UBERON:0007282,1.85e-09,9;UBERON:0004290,1.85e-09,9;UBERON:0009618,1.85e-09,9;UBERON:0000383,3.15e-08,10;UBERON:0007524,3.14e-07,11;UBERON:0003077,3.14e-07,11;UBERON:0007285,3.14e-07,11;UBERON:0002204,3.73e-07,32;UBERON:0002384,6.11e-07,46 | |||
|phase1_expression=0,2.09385244583617,2.27499619694768,5.74682001482977,2.50447864973174,0.16787927191189,0.467225281191051,0,0.563154888606667,0.70219357896598,0.171217968225505,0,0,0,0,0.404950534779652,0,0,0.137114433605739,0,0.510259740906419,1.19149141441062,3.91799683708403,0.95995453676044,0.68822784320151,0.57423196411502,0.86152399231815,0.646413698057667,0,0.504060259519861,0.443461021310609,2.54012269383853,6.76571266343027,15.8481681015439,0,0,0,9.20769587621197,5.4693474116666,5.23523743973798,24.1174910092716,6.83045484958446,7.2826552954673,41.2941562959893,45.2141113239035,46.6208750490671,7.04152209913235,0.872100625521786,4.39372365468944,5.44403717407994,5.5994568650145,4.31257693094915,0,0,0.672187598284928,17.4936416504444,7.16333599846892,44.34779993586,0,0,0,56.2481923234759,14.2287167377782,7.19919773825119,12.8552627133707,4.2628806896766,10.1864037576258,3.45796474789399,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0.131886287730194,0.0914876436024097,0,0,0.56276261003168,0.45839474333043,0,0.142371680799103,0,40.2863348532539,27.130190078336,6.08715426273523,0.860423876981386,19.039197343817,3.77792234146472,0,0.896053774194671,1.26399978118577,2.04516387093669,2.85764605063156,2.82671659608272,0,15.3991772897181,20.3844191765317,21.3320010945999,32.9066382337045,29.6431042605865,26.2872711407687,1.02765491747154,1.55362730188303,0.593768556259299,0,0,0.461230994512117,0,0.940709657085638,0.376999773989026,1.48316980640624,0.289198713839823,0,0.647067399789637,0,0,0,0,0,0.510914110417183,1.43778149407104,1.79970819298022,2.41433431438823,0.299581278809645,0,0,0,0.511430914660661,0,0.162241263067758,0,0.622034853050465,0.505445516867349,0,0.260240885925407,0,0,0.30140963567143,0.204109497453984,0.2562274405697,0.0937017245597288,0,0.215567992932842,0,0.175951124163949,0.219195732427575,0,0.348252166522167,0.61734640922383,0.398068533636986,2.1066395619397,2.57347907114715,3.12579849335152,0,0,0,0.23674473558521,0.196764231747404,0,0.232533944750408,0,0.233530684734339,0,0.656669856316381,0.486412857275134,0.292399974850665,0.439100230582101,0.268412837520744,0.420579897128254,0.102904612379284,2.31293148088659,0.264450566663544,0,0,0.128867461322093,0,0,0,0.949058123089023,0,0,0,0,0,1.51296634912286,1.39398891278057,0.189667900953082,0,0,0.203651327845314,0,0.0701358198903186,0.252946148497029,0.442830443938806,0.627994911365499,1.1105744752962,0.296452627087149,0.500535317148282,0,0,1.01430060694251,1.4470629585145,0.50925170356284,0.287696137450811,0.324270453550071,0.274561413188081,0,0.372140947668503,0,1.01031551178845,1.61457672169721,0,3.14080423283228,0.189491411770485,0,0.169745085775188,1.17345124144251,1.50755631697634,0.952174563544055,3.90267295715598,0.315270288212382,0.664394068946325,0.797273843287435,1.47476983244164,1.55416483679306,1.73578870297814,21.1107797514981,17.4049818821987,0.491764273019036,1.10374698521893,0,0.468846746368813,1.63934945376675,0.252470927204373,21.7700671397217,23.4263246577983,5.81643173878557,14.5770966751057,20.7202766896627,10.7569081699756,18.6212922770451,37.1164939547366,30.4371589018823,0.642642632843614,0,0,0.162886959353576,0.659880491890142,1.32745138339963,0,0,0.188605079755898,0,0,0.258428293168221,0.363533729477506,0,0,0,2.06271086496374,0,0.540183282093931,0,0.428674070063185,0.177340233642274,0.356737635204141,0,0,10.3255551548033,4.2366414172764,0.661585194164886,3.46261131177108,1.93757312035087,1.08563264870681,1.43246812803764,2.9545361954111,0.291480836629851,0.556275906031529,0.512612642393558,0,0,0,0,0.457556346413045,1.35982743995084,0.839708713941948,0.414599921413271,0.954670618015114,0.158167996790568,0.406638934253697,0.324016022465404,0.836353184057875,0,0.134864346384821,0.247960367176008,0.523511883968059,0,0,0,0.448549638131936,0,0,0.258319646955462,0,0.117357238645754,0.13020438484395,0,0.241584120826006,0.288030006257865,1.26404448251271,1.41907650703115,1.95150818613172,1.29920822977795,0.716106782669926,1.39076948346885,0.600977247599844,0.738447635872886,0.706765149637033,0.381034033274999,0.201652370273681,0.779663045918019,0.481059208201647,0.350630706544707,0.906921534460845,79.4709713079152,89.7138566094757,73.7013465838304,0.772758376128762,0.93841237725591,0.36630324853453,1.07184189539533,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.798049746802062,0,0.243106717068294,0,0.919217542250071,0,0.206035057238894,0.64183841918363,0.505394423527595,0.760437899670719,0,0.655490552289177,0.512201219238954,0.861532034334199,0,0.695305955669133,0.964546102318525,0,0.294397840268795,0,0.70990322463735,0.476872379894642,0.290692833264657,0.658765662907314,0.676916863133412,0.182927972872773,0.526139422875686,0.950628796921032,0.561142271657738,0.593175090620871,0.985044823755635,0.409231043169689,0.154936841185966,0.385813221962283,0.749431733813838,0.701794825336225,0.859484216193193,0.191288332068843,0.882365676478062,0 | |||
|short_description=p2@Mdm2 | |||
}} |
Revision as of 15:50, 12 September 2013
Short description: | p2@Mdm2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Mdm2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1864 |
Association with transcript: | 0bp_to_ENSMUST00000155285, uc007hdl.1_5end |
EntrezGene: | Mdm2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 1.83e-11 | 97 |
embryonic cell | 2.68e-11 | 70 |
motile cell | 1.50e-10 | 54 |
somatic stem cell | 1.15e-09 | 91 |
multi fate stem cell | 1.15e-09 | 91 |
autonomic neuron | 1.40e-09 | 9 |
multi-potent skeletal muscle stem cell | 1.85e-09 | 9 |
mesodermal cell | 4.31e-08 | 7 |
muscle precursor cell | 2.11e-07 | 6 |
muscle cell | 2.11e-07 | 6 |
myoblast | 2.11e-07 | 6 |
migratory neural crest cell | 3.70e-07 | 10 |
neuron associated cell | 3.70e-07 | 10 |
glial cell (sensu Vertebrata) | 3.70e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 3.70e-07 | 10 |
glial cell | 3.70e-07 | 10 |
glioblast | 3.70e-07 | 10 |
glioblast (sensu Vertebrata) | 3.70e-07 | 10 |
connective tissue cell | 6.11e-07 | 46 |
mesenchymal cell | 6.11e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system | 1.31e-11 | 11 |
autonomic nervous system | 1.40e-09 | 9 |
skeletal muscle tissue | 1.85e-09 | 9 |
striated muscle tissue | 1.85e-09 | 9 |
muscle tissue | 1.85e-09 | 9 |
multilaminar epithelium | 1.85e-09 | 9 |
epithelial vesicle | 1.85e-09 | 9 |
musculature | 1.85e-09 | 9 |
somite | 1.85e-09 | 9 |
myotome | 1.85e-09 | 9 |
presomitic mesoderm | 1.85e-09 | 9 |
presumptive segmental plate | 1.85e-09 | 9 |
dermomyotome | 1.85e-09 | 9 |
trunk paraxial mesoderm | 1.85e-09 | 9 |
musculature of body | 3.15e-08 | 10 |
dense mesenchyme tissue | 3.14e-07 | 11 |
paraxial mesoderm | 3.14e-07 | 11 |
presumptive paraxial mesoderm | 3.14e-07 | 11 |
musculoskeletal system | 3.73e-07 | 32 |
connective tissue | 6.11e-07 | 46 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.