FFCP PHASE1:Hg19::chr2:218994002..218994051,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3579|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6027|TSSclassifier=N|UniProt=C9J1J7|association_with_transcript=0bp_to_ENST00000428565_5end|coexpression_cluster_id=C2|description=CAGE_peak_2_at_CXCR2_5end|id=chr2:218994002..218994051,+|ontology_enrichment_celltype=CL:0002057!4.89e-33!42;CL:0000860!6.73e-30!45;CL:0000738!7.12e-25!140;CL:0000766!5.59e-22!76;CL:0002087!7.63e-22!119;CL:0002031!4.60e-18!124;CL:0002009!2.84e-17!65;CL:0002194!4.33e-17!63;CL:0000576!4.33e-17!63;CL:0000040!4.33e-17!63;CL:0000559!4.33e-17!63;CL:0000037!8.63e-17!172;CL:0000566!8.63e-17!172;CL:0002032!6.43e-16!165;CL:0000837!6.43e-16!165;CL:0000557!8.77e-15!71;CL:0000988!1.05e-14!182;CL:0000839!3.39e-14!70;CL:0000763!1.22e-11!112;CL:0000049!1.22e-11!112;CL:0000094!1.81e-11!8;CL:0000625!8.20e-10!11;CL:0000081!1.06e-07!11|ontology_enrichment_celltype_v019=CL:0000860;1.68e-24;33!CL:0002057;1.68e-24;33!CL:0000094;9.62e-20;8!CL:0000473;3.05e-16;39!CL:0000234;3.05e-16;39!CL:0000081;6.89e-14;11!CL:0000576;1.23e-13;48!CL:0000766;2.52e-11;69!CL:0002087;1.61e-09;104!CL:0000775;5.58e-09;3!CL:0000623;3.53e-08;3!CL:0000767;1.14e-07;3!CL:0000738;2.05e-07;136!CL:0000226;2.96e-07;3!CL:0000842;2.96e-07;3!CL:0000625;3.53e-07;11|ontology_enrichment_celltype_v019_2=CL:0000738,1.64e-28,136;CL:0000860,9.94e-26,42;CL:0002057,9.94e-26,42;CL:0000766,8.78e-25,72;CL:0002087,1.33e-22,115;CL:0000473,1.22e-21,48;CL:0000234,1.22e-21,48;CL:0000037,1.50e-20,168;CL:0000094,1.04e-19,8;CL:0000988,7.69e-19,177;CL:0002032,1.28e-18,161;CL:0000837,1.28e-18,161;CL:0002031,1.77e-17,120;CL:0002194,5.86e-16,59;CL:0000576,5.86e-16,59;CL:0000040,5.86e-16,59;CL:0000559,5.86e-16,59;CL:0002009,3.13e-15,61;CL:0000081,7.27e-14,11;CL:0000763,1.28e-13,108;CL:0000049,1.28e-13,108;CL:0000839,1.32e-13,66;CL:0000557,2.60e-13,67;CL:0000775,5.59e-09,3;CL:0000623,3.90e-08,3;CL:0000825,3.90e-08,3;CL:0000767,1.23e-07,3;CL:0000226,2.37e-07,3;CL:0000842,2.37e-07,3;CL:0000625,3.73e-07,11|ontology_enrichment_development_v019=CL:0002057;1.24e-18;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!7.68e-46!115;UBERON:0002390!1.25e-20!102;UBERON:0003061!1.25e-20!102;UBERON:0002193!1.99e-19!112;UBERON:0000178!3.98e-12!15;UBERON:0000179!3.98e-12!15;UBERON:0000463!3.98e-12!15;UBERON:0002371!8.30e-12!80;UBERON:0001474!3.31e-10!86;UBERON:0001049!9.29e-10!57;UBERON:0005068!9.29e-10!57;UBERON:0006241!9.29e-10!57;UBERON:0007135!9.29e-10!57;UBERON:0002405!1.32e-08!115;UBERON:0002780!1.45e-08!41;UBERON:0001890!1.45e-08!41;UBERON:0006240!1.45e-08!41;UBERON:0002616!2.68e-08!59;UBERON:0003080!3.22e-08!42;UBERON:0002420!7.93e-08!9;UBERON:0007245!7.93e-08!9;UBERON:0010009!7.93e-08!9;UBERON:0010011!7.93e-08!9;UBERON:0000454!7.93e-08!9;UBERON:0004765!1.22e-07!101;UBERON:0001434!1.22e-07!101;UBERON:0002020!1.95e-07!34;UBERON:0003528!1.95e-07!34;UBERON:0001893!2.01e-07!34;UBERON:0002308!2.53e-07!9;UBERON:0000125!2.53e-07!9;UBERON:0002791!5.28e-07!33|ontology_enrichment_uberon_v019=UBERON:0000178;5.23e-22;15!UBERON:0000179;5.23e-22;15!UBERON:0000463;5.23e-22;15!UBERON:0002390;1.53e-11;32!UBERON:0002193;1.98e-08;42|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.16e-24,98;UBERON:0003061,1.16e-24,98;UBERON:0002193,1.72e-24,108;UBERON:0000178,4.36e-22,15;UBERON:0000179,4.36e-22,15;UBERON:0000463,4.36e-22,15;UBERON:0007023,1.73e-12,114;UBERON:0002405,5.07e-12,93;UBERON:0002371,5.12e-11,76;UBERON:0001474,8.89e-10,82;UBERON:0004765,2.14e-08,90;UBERON:0003081,5.20e-08,203;UBERON:0001434,5.32e-07,100|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.29382842958246,3.0706351847777,2.63187409637329,0,0,0,0,0,0,1.10799081706375,1.40381113229099,1.51907609501096,0,0,0,5.08893835728477,1.13362783106643,7.27752183563449,1.62700325833979,0.411167888021826,1.54853185447552,3.74000110018796,0.768482119587302,2.60130452877444,2.41321976515633,0.645484683583826,1.35426486594342,3.57660445130949,0.818718450173537,1.12361742222542,2.75475503133812,0,3.83602275479425,6.26717470354761,0.398927315243264,8.09827026012119,0.870627715885752,1.13477044938228,3.11411124497787,1.00499466102697,0.521482918420201,2.6062661364614,3.02699751316684,1.10483290796269,4.1140110367315,0,0.425208599930087,0,0.44931452458598,0.150176892841506,0.803627933485401,0.285012743741249,0.39783335439818,0.365328307529268,0,3.82297027883492,0,5.9742231159311,0.800791974072025,2.87376219977242,2.64417949113945,1.90810750907073,0,0,0,1.32171328579026,0.560508562981536,0.263384084775077,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27426165729639,0,0.950452044448374,3.16207750063323,6.65530378002976,6.24653632761729,6.39298580518846,4.10563998460523,0.201606743224732,0.802320587350522,0.724122019413995,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.982343066232845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,295.188135056782,469.214119619474,1.3082821564276,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3579 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6027 | |||
|TSSclassifier=N | |||
|UniProt=C9J1J7 | |||
|association_with_transcript=0bp_to_ENST00000428565_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_2_at_CXCR2_5end | |||
|id=chr2:218994002..218994051,+ | |||
|ontology_enrichment_celltype=CL:0002057!4.89e-33!42;CL:0000860!6.73e-30!45;CL:0000738!7.12e-25!140;CL:0000766!5.59e-22!76;CL:0002087!7.63e-22!119;CL:0002031!4.60e-18!124;CL:0002009!2.84e-17!65;CL:0002194!4.33e-17!63;CL:0000576!4.33e-17!63;CL:0000040!4.33e-17!63;CL:0000559!4.33e-17!63;CL:0000037!8.63e-17!172;CL:0000566!8.63e-17!172;CL:0002032!6.43e-16!165;CL:0000837!6.43e-16!165;CL:0000557!8.77e-15!71;CL:0000988!1.05e-14!182;CL:0000839!3.39e-14!70;CL:0000763!1.22e-11!112;CL:0000049!1.22e-11!112;CL:0000094!1.81e-11!8;CL:0000625!8.20e-10!11;CL:0000081!1.06e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.68e-24;33!CL:0002057;1.68e-24;33!CL:0000094;9.62e-20;8!CL:0000473;3.05e-16;39!CL:0000234;3.05e-16;39!CL:0000081;6.89e-14;11!CL:0000576;1.23e-13;48!CL:0000766;2.52e-11;69!CL:0002087;1.61e-09;104!CL:0000775;5.58e-09;3!CL:0000623;3.53e-08;3!CL:0000767;1.14e-07;3!CL:0000738;2.05e-07;136!CL:0000226;2.96e-07;3!CL:0000842;2.96e-07;3!CL:0000625;3.53e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.64e-28,136;CL:0000860,9.94e-26,42;CL:0002057,9.94e-26,42;CL:0000766,8.78e-25,72;CL:0002087,1.33e-22,115;CL:0000473,1.22e-21,48;CL:0000234,1.22e-21,48;CL:0000037,1.50e-20,168;CL:0000094,1.04e-19,8;CL:0000988,7.69e-19,177;CL:0002032,1.28e-18,161;CL:0000837,1.28e-18,161;CL:0002031,1.77e-17,120;CL:0002194,5.86e-16,59;CL:0000576,5.86e-16,59;CL:0000040,5.86e-16,59;CL:0000559,5.86e-16,59;CL:0002009,3.13e-15,61;CL:0000081,7.27e-14,11;CL:0000763,1.28e-13,108;CL:0000049,1.28e-13,108;CL:0000839,1.32e-13,66;CL:0000557,2.60e-13,67;CL:0000775,5.59e-09,3;CL:0000623,3.90e-08,3;CL:0000825,3.90e-08,3;CL:0000767,1.23e-07,3;CL:0000226,2.37e-07,3;CL:0000842,2.37e-07,3;CL:0000625,3.73e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;1.24e-18;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.68e-46!115;UBERON:0002390!1.25e-20!102;UBERON:0003061!1.25e-20!102;UBERON:0002193!1.99e-19!112;UBERON:0000178!3.98e-12!15;UBERON:0000179!3.98e-12!15;UBERON:0000463!3.98e-12!15;UBERON:0002371!8.30e-12!80;UBERON:0001474!3.31e-10!86;UBERON:0001049!9.29e-10!57;UBERON:0005068!9.29e-10!57;UBERON:0006241!9.29e-10!57;UBERON:0007135!9.29e-10!57;UBERON:0002405!1.32e-08!115;UBERON:0002780!1.45e-08!41;UBERON:0001890!1.45e-08!41;UBERON:0006240!1.45e-08!41;UBERON:0002616!2.68e-08!59;UBERON:0003080!3.22e-08!42;UBERON:0002420!7.93e-08!9;UBERON:0007245!7.93e-08!9;UBERON:0010009!7.93e-08!9;UBERON:0010011!7.93e-08!9;UBERON:0000454!7.93e-08!9;UBERON:0004765!1.22e-07!101;UBERON:0001434!1.22e-07!101;UBERON:0002020!1.95e-07!34;UBERON:0003528!1.95e-07!34;UBERON:0001893!2.01e-07!34;UBERON:0002308!2.53e-07!9;UBERON:0000125!2.53e-07!9;UBERON:0002791!5.28e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.23e-22;15!UBERON:0000179;5.23e-22;15!UBERON:0000463;5.23e-22;15!UBERON:0002390;1.53e-11;32!UBERON:0002193;1.98e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.16e-24,98;UBERON:0003061,1.16e-24,98;UBERON:0002193,1.72e-24,108;UBERON:0000178,4.36e-22,15;UBERON:0000179,4.36e-22,15;UBERON:0000463,4.36e-22,15;UBERON:0007023,1.73e-12,114;UBERON:0002405,5.07e-12,93;UBERON:0002371,5.12e-11,76;UBERON:0001474,8.89e-10,82;UBERON:0004765,2.14e-08,90;UBERON:0003081,5.20e-08,203;UBERON:0001434,5.32e-07,100 | |||
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|short_description=p2@CXCR2 | |||
}} |
Revision as of 16:48, 12 September 2013
Short description: | p2@CXCR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_CXCR2_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000428565_5end |
EntrezGene: | CXCR2 |
HGNC: | 6027 |
UniProt: | C9J1J7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.64e-28 | 136 |
classical monocyte | 9.94e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.94e-26 | 42 |
myeloid leukocyte | 8.78e-25 | 72 |
nongranular leukocyte | 1.33e-22 | 115 |
defensive cell | 1.22e-21 | 48 |
phagocyte | 1.22e-21 | 48 |
hematopoietic stem cell | 1.50e-20 | 168 |
granulocyte | 1.04e-19 | 8 |
hematopoietic cell | 7.69e-19 | 177 |
hematopoietic oligopotent progenitor cell | 1.28e-18 | 161 |
hematopoietic multipotent progenitor cell | 1.28e-18 | 161 |
hematopoietic lineage restricted progenitor cell | 1.77e-17 | 120 |
monopoietic cell | 5.86e-16 | 59 |
monocyte | 5.86e-16 | 59 |
monoblast | 5.86e-16 | 59 |
promonocyte | 5.86e-16 | 59 |
macrophage dendritic cell progenitor | 3.13e-15 | 61 |
blood cell | 7.27e-14 | 11 |
myeloid cell | 1.28e-13 | 108 |
common myeloid progenitor | 1.28e-13 | 108 |
myeloid lineage restricted progenitor cell | 1.32e-13 | 66 |
granulocyte monocyte progenitor cell | 2.60e-13 | 67 |
neutrophil | 5.59e-09 | 3 |
natural killer cell | 3.90e-08 | 3 |
pro-NK cell | 3.90e-08 | 3 |
basophil | 1.23e-07 | 3 |
single nucleate cell | 2.37e-07 | 3 |
mononuclear cell | 2.37e-07 | 3 |
CD8-positive, alpha-beta T cell | 3.73e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.16e-24 | 98 |
blood island | 1.16e-24 | 98 |
hemolymphoid system | 1.72e-24 | 108 |
blood | 4.36e-22 | 15 |
haemolymphatic fluid | 4.36e-22 | 15 |
organism substance | 4.36e-22 | 15 |
adult organism | 1.73e-12 | 114 |
immune system | 5.07e-12 | 93 |
bone marrow | 5.12e-11 | 76 |
bone element | 8.89e-10 | 82 |
skeletal element | 2.14e-08 | 90 |
lateral plate mesoderm | 5.20e-08 | 203 |
skeletal system | 5.32e-07 | 100 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.