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FFCP PHASE1:Mm9::chr10:69559960..69559983,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=76551|HGNC=|UniProt=D3YZP9|association_with_transcript=91bp_to_ENSMUST00000147545,NM_001111121,uc011xfv.1_5end|description=CAGE_peak_4_at_Ccdc6_5end|id=chr10:69559960..69559983,+|ontology_enrichment_celltype=CL:0000393!3.71e-11!39;CL:0000211!3.71e-11!39;CL:0000540!8.28e-11!33;CL:0000047!8.28e-11!33;CL:0000031!8.28e-11!33;CL:0000404!8.28e-11!33;CL:0000117!1.02e-10!23;CL:0000337!1.02e-10!23;CL:0000221!3.39e-09!44;CL:0000133!3.39e-09!44;CL:0002319!4.43e-09!43;CL:0000055!6.41e-09!50|ontology_enrichment_celltype_v019_2=CL:0000117,2.43e-13,23;CL:0000337,2.43e-13,23;CL:0000393,4.13e-12,39;CL:0000211,4.13e-12,39;CL:0000540,4.42e-12,33;CL:0000047,4.42e-12,33;CL:0000031,4.42e-12,33;CL:0000404,4.42e-12,33;CL:0000221,1.65e-09,44;CL:0000133,1.65e-09,44;CL:0002319,2.35e-09,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!4.62e-10!73;UBERON:0005743!4.62e-10!73;UBERON:0000073!1.56e-09!75;UBERON:0001016!1.56e-09!75;UBERON:0002346!8.18e-09!71;UBERON:0003075!8.18e-09!71;UBERON:0007284!8.18e-09!71;UBERON:0004121!8.36e-09!102;UBERON:0000924!8.36e-09!102;UBERON:0006601!8.36e-09!102;UBERON:0001049!2.82e-08!52;UBERON:0005068!2.82e-08!52;UBERON:0006241!2.82e-08!52;UBERON:0007135!2.82e-08!52|ontology_enrichment_uberon_v019_2=UBERON:0002346,7.43e-12,64;UBERON:0003075,7.43e-12,64;UBERON:0007284,7.43e-12,64;UBERON:0001017,3.52e-11,73;UBERON:0001016,1.95e-10,75;UBERON:0010371,3.94e-10,73;UBERON:0001049,5.68e-10,52;UBERON:0005068,5.68e-10,52;UBERON:0006241,5.68e-10,52;UBERON:0007135,5.68e-10,52;UBERON:0000073,7.23e-10,54;UBERON:0004121,1.71e-09,95;UBERON:0000924,1.71e-09,95;UBERON:0006601,1.71e-09,95;UBERON:0002020,2.16e-07,34;UBERON:0003056,7.17e-07,49|phase1_expression=1.12104192973356,0,0,0.30246421130683,1.00179145989269,0,0.700837921786577,0.516493293766305,0.422366166455,1.63845168425395,0.171217968225505,0.478632953972018,0.342401459862411,0.611942816932982,0.666219523631325,0.202475267389826,0.699561878128147,0.315462165358238,0.685572168028694,0.42438965179803,0.680346321208558,0.0992909512008853,0,0.159992422793407,0,0,0,0,0.380046838912748,0.252030129759931,0.221730510655305,0.635030673459631,0,0,0,0.166234645358492,0.204169356262369,0.418531630736908,0,0,0,0,0,0.755380907853464,1.52065396829272,1.83546752161682,3.9119567217402,0.436050312760893,0.659058548203415,1.74986909166855,1.1198913730029,0,0.671130424230945,0,1.68046899571232,1.02903774414379,1.71920063963254,0.515672092277442,4.85559506063035,3.70293685490423,3.1691570175309,0.338844532069132,0.889294796111139,0.449949858640699,1.97773272513395,0,0.898800331555214,0.768436610643109,1.65903379693564,2.8351247049655,1.26194976810829,3.14216082844184,2.87129103237098,2.57230678351403,2.68367318851062,0.919218786610021,0,1.53224805702225,2.15049146558741,4.74790635828698,4.66586982372289,2.08365348222704,1.11673199600552,2.8138130501584,2.13917546887534,3.24091444021034,3.55929201997757,6.15118171223492,0.37863096666592,0.604572480854284,1.44932244350839,0,1.3599426674155,0.539703191637817,0,0,0.140444420131752,0.681721290312231,0.779358013808606,1.41335829804136,1.12674735821344,1.28326477414318,0,0,0.432982082022428,0.253359865475099,1.51657333504435,0.34255163915718,0,0.29688427812965,0.346970653532272,0.913396434936424,1.15307748628029,0.150722640552623,1.64624189989987,0.628332956648377,0.247194967734374,0.289198713839823,0,2.42650274921114,1.10420759230197,0,0,0,1.8850203613211,0.255457055208591,0.239630249011841,0,0.254140454146129,1.79748767285787,0,2.76439574648302,1.04294592115366,1.79000820131231,1.0389402227978,1.94689515681309,2.44414473240759,1.24406970610093,0.252722758433675,0.420883711772948,1.04096354370163,1.83921683546778,1.62055916824814,1.05493372485001,1.83698547708585,2.17793324484245,1.40552586839593,0.258703370739016,0.431135985865684,1.32374256117473,2.28736461413134,1.53437012699302,1.11218899690239,1.39300866608867,1.4404749548556,1.59227413454795,0,0.257347907114715,0,0.621377317606506,0.469052119962192,1.2604344302271,0.473489471170421,0.983821158737019,0.771335564436891,0.930135779001631,0.536546802799238,0.700592054203017,0.16455984991348,0.32833492815819,0.56748166682099,0.292399974850665,0.219550115291051,0.134206418760372,1.47202963994889,3.08713837137853,0,1.05780226665418,1.2797295032114,1.16118335930219,0.128867461322093,0,0.444756087689741,0.570676878337677,0.474529061544512,0.329397909448022,0.251335208800269,0.397912944082302,0.38992817423824,0.898819408654221,0,0.199141273254367,1.70701110857774,1.48523066392647,1.1270773567308,2.44381593414377,0.969762435838129,1.68325967736765,1.01178459398812,0.295220295959204,0,0.370191491765402,0,0.83422552858047,0.393117990226406,0,0.202860121388503,0.482354319504834,0.763877555344259,0,0.324270453550071,0,0,0,0.936113019343682,0.757736633841335,0,0,0.184753190166605,1.70542270593436,0.651859905768103,1.01847051465113,0.704070744865506,0.335012514883631,0.952174563544055,2.34160377429359,1.10344600874334,0.885858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|EntrezGene=76551
|HGNC=
|UniProt=D3YZP9
|association_with_transcript=91bp_to_ENSMUST00000147545,NM_001111121,uc011xfv.1_5end
|description=CAGE_peak_4_at_Ccdc6_5end
|id=chr10:69559960..69559983,+
|ontology_enrichment_celltype=CL:0000393!3.71e-11!39;CL:0000211!3.71e-11!39;CL:0000540!8.28e-11!33;CL:0000047!8.28e-11!33;CL:0000031!8.28e-11!33;CL:0000404!8.28e-11!33;CL:0000117!1.02e-10!23;CL:0000337!1.02e-10!23;CL:0000221!3.39e-09!44;CL:0000133!3.39e-09!44;CL:0002319!4.43e-09!43;CL:0000055!6.41e-09!50
|ontology_enrichment_celltype_v019_2=CL:0000117,2.43e-13,23;CL:0000337,2.43e-13,23;CL:0000393,4.13e-12,39;CL:0000211,4.13e-12,39;CL:0000540,4.42e-12,33;CL:0000047,4.42e-12,33;CL:0000031,4.42e-12,33;CL:0000404,4.42e-12,33;CL:0000221,1.65e-09,44;CL:0000133,1.65e-09,44;CL:0002319,2.35e-09,43
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!4.62e-10!73;UBERON:0005743!4.62e-10!73;UBERON:0000073!1.56e-09!75;UBERON:0001016!1.56e-09!75;UBERON:0002346!8.18e-09!71;UBERON:0003075!8.18e-09!71;UBERON:0007284!8.18e-09!71;UBERON:0004121!8.36e-09!102;UBERON:0000924!8.36e-09!102;UBERON:0006601!8.36e-09!102;UBERON:0001049!2.82e-08!52;UBERON:0005068!2.82e-08!52;UBERON:0006241!2.82e-08!52;UBERON:0007135!2.82e-08!52
|ontology_enrichment_uberon_v019_2=UBERON:0002346,7.43e-12,64;UBERON:0003075,7.43e-12,64;UBERON:0007284,7.43e-12,64;UBERON:0001017,3.52e-11,73;UBERON:0001016,1.95e-10,75;UBERON:0010371,3.94e-10,73;UBERON:0001049,5.68e-10,52;UBERON:0005068,5.68e-10,52;UBERON:0006241,5.68e-10,52;UBERON:0007135,5.68e-10,52;UBERON:0000073,7.23e-10,54;UBERON:0004121,1.71e-09,95;UBERON:0000924,1.71e-09,95;UBERON:0006601,1.71e-09,95;UBERON:0002020,2.16e-07,34;UBERON:0003056,7.17e-07,49
|phase1_expression=1.12104192973356,0,0,0.30246421130683,1.00179145989269,0,0.700837921786577,0.516493293766305,0.422366166455,1.63845168425395,0.171217968225505,0.478632953972018,0.342401459862411,0.611942816932982,0.666219523631325,0.202475267389826,0.699561878128147,0.315462165358238,0.685572168028694,0.42438965179803,0.680346321208558,0.0992909512008853,0,0.159992422793407,0,0,0,0,0.380046838912748,0.252030129759931,0.221730510655305,0.635030673459631,0,0,0,0.166234645358492,0.204169356262369,0.418531630736908,0,0,0,0,0,0.755380907853464,1.52065396829272,1.83546752161682,3.9119567217402,0.436050312760893,0.659058548203415,1.74986909166855,1.1198913730029,0,0.671130424230945,0,1.68046899571232,1.02903774414379,1.71920063963254,0.515672092277442,4.85559506063035,3.70293685490423,3.1691570175309,0.338844532069132,0.889294796111139,0.449949858640699,1.97773272513395,0,0.898800331555214,0.768436610643109,1.65903379693564,2.8351247049655,1.26194976810829,3.14216082844184,2.87129103237098,2.57230678351403,2.68367318851062,0.919218786610021,0,1.53224805702225,2.15049146558741,4.74790635828698,4.66586982372289,2.08365348222704,1.11673199600552,2.8138130501584,2.13917546887534,3.24091444021034,3.55929201997757,6.15118171223492,0.37863096666592,0.604572480854284,1.44932244350839,0,1.3599426674155,0.539703191637817,0,0,0.140444420131752,0.681721290312231,0.779358013808606,1.41335829804136,1.12674735821344,1.28326477414318,0,0,0.432982082022428,0.253359865475099,1.51657333504435,0.34255163915718,0,0.29688427812965,0.346970653532272,0.913396434936424,1.15307748628029,0.150722640552623,1.64624189989987,0.628332956648377,0.247194967734374,0.289198713839823,0,2.42650274921114,1.10420759230197,0,0,0,1.8850203613211,0.255457055208591,0.239630249011841,0,0.254140454146129,1.79748767285787,0,2.76439574648302,1.04294592115366,1.79000820131231,1.0389402227978,1.94689515681309,2.44414473240759,1.24406970610093,0.252722758433675,0.420883711772948,1.04096354370163,1.83921683546778,1.62055916824814,1.05493372485001,1.83698547708585,2.17793324484245,1.40552586839593,0.258703370739016,0.431135985865684,1.32374256117473,2.28736461413134,1.53437012699302,1.11218899690239,1.39300866608867,1.4404749548556,1.59227413454795,0,0.257347907114715,0,0.621377317606506,0.469052119962192,1.2604344302271,0.473489471170421,0.983821158737019,0.771335564436891,0.930135779001631,0.536546802799238,0.700592054203017,0.16455984991348,0.32833492815819,0.56748166682099,0.292399974850665,0.219550115291051,0.134206418760372,1.47202963994889,3.08713837137853,0,1.05780226665418,1.2797295032114,1.16118335930219,0.128867461322093,0,0.444756087689741,0.570676878337677,0.474529061544512,0.329397909448022,0.251335208800269,0.397912944082302,0.38992817423824,0.898819408654221,0,0.199141273254367,1.70701110857774,1.48523066392647,1.1270773567308,2.44381593414377,0.969762435838129,1.68325967736765,1.01178459398812,0.295220295959204,0,0.370191491765402,0,0.83422552858047,0.393117990226406,0,0.202860121388503,0.482354319504834,0.763877555344259,0,0.324270453550071,0,0,0,0.936113019343682,0.757736633841335,0,0,0.184753190166605,1.70542270593436,0.651859905768103,1.01847051465113,0.704070744865506,0.335012514883631,0.952174563544055,2.34160377429359,1.10344600874334,0.8858587585951,1.2756381492599,0,0.345369963731791,0.578596234326046,1.50791283939272,1.63171705145613,0.491764273019036,0.827810238914197,1.60550589987792,1.87538698547525,1.3114795630134,3.02965112645248,0.631016438832513,2.34263246577983,1.50796378412959,0.955875191810208,2.00518806674155,1.41538265394416,0.809621403349789,1.16902343164525,0.395287777946524,0.642642632843614,2.12910127812403,2.49291845134157,2.28041743095006,0.824850614862677,0,1.94224508923985,0.302323556964751,0.188605079755898,0.885905678642318,0.307435147943927,0.516856586336442,1.09060118843252,1.06949213515416,0.948110273807448,0,0,0,0.720244376125241,1.55230420539305,1.07168517515796,1.95074257006501,1.42695054081656,1.31639216481697,0.608929898229199,0.704015124191131,0.63549621259146,0.441056796109924,0.98931751764888,1.45317984026315,0.72375509913787,0.477489376012546,0.656563598980245,0,2.22510362412612,0,0.619160603889667,0.740778109478847,0.376736914009382,0.27338845544205,0.686334519619568,0.169978429993855,0.979660166265606,0.414599921413271,0.954670618015114,1.58167996790568,0.406638934253697,0.648032044930808,0.209088296014469,0.87345025498471,0.809186078308924,1.23980183588004,0.523511883968059,0.129614973291793,0.621339313086926,1.12738587736838,0.598066184175915,0.827292452285488,1.55560950675238,0.258319646955462,0.506868376472335,0.58678619322877,1.43224823328345,1.25831213310853,0.241584120826006,0.576060012515731,0,1.41907650703115,2.36235201479103,1.42912905275575,0.895133478337407,0.993406773906324,0.721172697119813,0.590758108698309,1.00966449948148,0.685861259894999,0.504130925684203,0.779663045918019,0.288635524920988,0.935015217452552,0.226730383615211,1.10992976687032,0,0,2.31827512838629,2.81523713176773,1.09890974560359,0.857473516316263,1.00314420807073,0.564751842617067,2.30162618253588,0.572895513439397,1.89038500578056,0.685082519770642,0,0,0.900642406448441,0.453142408984205,0.51776031175182,1.764384908931,1.59609949360412,1.70733605754134,1.21553358534147,2.30574478890781,1.83843508450014,2.44471400581777,1.03017528619447,0.320919209591815,2.27427490587418,1.01391719956096,0.943131706930381,1.31098110457835,0.704276676453562,0.861532034334199,0.952587382566147,0.695305955669133,0.578727661391115,1.64834360321323,0.883193520806384,1.02860775715625,0.887379030796687,1.1921809497366,1.30811774969096,1.03520318456864,1.69229215783353,0.914639864363863,2.89376682581627,1.35804113845862,2.24456908663095,0.949080144993393,1.97008964751127,0.818462086339379,0.77468420592983,0.771626443924566,1.49886346762768,0.701794825336225,1.50409737833809,2.10417165275728,1.32354851471709,0.927471342481686
|short_description=p4@Ccdc6
}}

Revision as of 17:16, 12 September 2013

Short description:p4@Ccdc6
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Ccdc6_5end
Coexpression cluster:NA
Association with transcript: 91bp_to_ENSMUST00000147545, NM_001111121, uc011xfv.1_5end
EntrezGene:Ccdc6
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p4@Ccdc6

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.52
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.64
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.48
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.61
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.69
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.68
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.76
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.52
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.84
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.91
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.75
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.12
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.67
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.68
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.72
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C34.86
Mouse Granule cells, donor2.CNhs12357.11731-123E33.70
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.66
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.84
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.26
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.87
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.57
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.68
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.53
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.75
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.67
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.14
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.24
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.56
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E16.15
Mouse Schwann, donor1.CNhs12507.11728-123D90.38
Mouse Schwann, donor2.CNhs12573.11746-123F90.60
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.45
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.41
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.13
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C11.65
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F52.43
bone (os femoris), neonate N16.CNhs11225.1525-43A61.10
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I21.89
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A41.80
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F12.76
cortex, adult.CNhs10473.12-14D51.04
cortex, neonate N30.CNhs11107.1392-42F21.79
diencephalon, adult.CNhs10482.20-12F21.04
diencephalon, neonate N30.CNhs11201.1388-42B21.95
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.44
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.24
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C61.04
eyeball, embryo E14.CNhs10521.399-16E21.84
eyeball, embryo E15.CNhs10593.426-16C91.62
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C61.84
eyeball, neonate N01.CNhs11140.1532-43E72.18
eyeball, neonate N02.CNhs11205.1551-44G81.41
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H21.32
forelimb, embryo E13.CNhs10589.384-1E22.29
forelimb, embryo E14.CNhs10577.413-26A81.53
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B51.44
gonad, embryo E13.CNhs11044.1564-45I61.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I91.26
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.98
heart, embryo E16.CNhs11021.457-17C60.77
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.70
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.57
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E81.47
hippocampus, neonate N00.CNhs11228.627-43G13.09
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A31.06
intestine, embryo E12.CNhs11019.1251-16I51.28
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I91.71
kidney, embryo E15.CNhs10997.434-16F81.49
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I22.44
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G71.68
kidney, neonate N10.CNhs11206.758-6D51.01
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.83
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A30.76
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G21.71
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C51.02
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C62.34
lung, neonate N06.CNhs11212.683-20E51.10
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E61.28
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.63
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C21.61
medulla oblongata, neonate N30.CNhs11200.1396-42A31.88
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.31
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.03
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.34
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.51
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.01
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.42
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I72.13
ovary, embryo E18.CNhs11040.505-44H72.49
ovary, neonate N00.CNhs11217.1299-22I42.28
oviduct, adult pregnant day01.CNhs10500.988-6G60.82
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.94
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C71.55
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B91.95
pituitary gland, embryo E16.CNhs11036.449-43F61.43
pituitary gland, embryo E17.CNhs11039.1265-44F51.32
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.99
skin, neonate N00.CNhs11124.650-25G41.45
skin, neonate N03.CNhs11215.662-22H30.72
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C92.23
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.98
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E31.58
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B80.81
stomach, neonate N07.CNhs11210.718-18A91.24
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.83
testis, embryo E16.CNhs11033.470-26G51.56
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.59
testis, neonate N07.CNhs11222.726-26I41.43
testis, neonate N10.CNhs11204.763-44D91.26
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I41.42
thymus, embryo E15.CNhs11005.430-45I22.36
thymus, embryo E16.CNhs11002.456-26C51.43
thymus, embryo E17.CNhs10581.478-18C10.90
thymus, embryo E18.CNhs10595.1273-19G40.99
thymus, neonate N02.CNhs11181.1541-43F80.72
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C41.01
thymus, neonate N07.CNhs11211.713-19D30.69
thymus, neonate N10.CNhs11194.748-24E40.50
thymus, neonate N20.CNhs11186.820-7A20.78
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.94
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E42.32
uterus, adult pregnant day19.CNhs10497.590-15F52.82
uterus, adult.CNhs10509.92-27E51.10
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.89
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I81.76
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H21.71
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B12.31
whole body, embryo E16.CNhs10514.453-14F21.84
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.86
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.36
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C21.50
whole body, neonate N01.CNhs10576.659-23C62.10
whole body, neonate N06.CNhs10515.692-21D11.32
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.43e-1323
neuroblast (sensu Vertebrata)2.43e-1323
electrically responsive cell4.13e-1239
electrically active cell4.13e-1239
neuron4.42e-1233
neuronal stem cell4.42e-1233
neuroblast4.42e-1233
electrically signaling cell4.42e-1233
ectodermal cell1.65e-0944
neurectodermal cell1.65e-0944
neural cell2.35e-0943

Uber anatomy
Ontology termp-valuen
neurectoderm7.43e-1264
neural plate7.43e-1264
presumptive neural plate7.43e-1264
central nervous system3.52e-1173
nervous system1.95e-1075
ecto-epithelium3.94e-1073
neural tube5.68e-1052
neural rod5.68e-1052
future spinal cord5.68e-1052
neural keel5.68e-1052
regional part of nervous system7.23e-1054
ectoderm-derived structure1.71e-0995
ectoderm1.71e-0995
presumptive ectoderm1.71e-0995
gray matter2.16e-0734
pre-chordal neural plate7.17e-0749







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