FFCP PHASE1:Mm9::chr11:75401566..75401653,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=18738|HGNC=|MCL_coexpression_id=240|UniProt=P53810,Q5ND42|association_with_transcript=0bp_to_ENSMUST00000143219,NM_008850,uc007keh.1,uc007kei.1_5end|description=CAGE_peak_1_at_Pitpna_5end|id=chr11:75401566..75401653,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000064!6.87e-13!99;UBERON:0002020!5.32e-11!34;UBERON:0001049!4.27e-10!52;UBERON:0005068!4.27e-10!52;UBERON:0006241!4.27e-10!52;UBERON:0007135!4.27e-10!52;UBERON:0000955!9.45e-10!50;UBERON:0006238!9.45e-10!50;UBERON:0002616!2.00e-09!49;UBERON:0002791!2.13e-09!29;UBERON:0003528!2.13e-09!29;UBERON:0001893!2.13e-09!29;UBERON:0000073!6.49e-08!75;UBERON:0001016!6.49e-08!75;UBERON:0007023!1.33e-07!51;UBERON:0001017!2.09e-07!73;UBERON:0005743!2.09e-07!73;UBERON:0007811!2.44e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.27e-11,54;UBERON:0002020,5.32e-11,34;UBERON:0001049,4.27e-10,52;UBERON:0005068,4.27e-10,52;UBERON:0006241,4.27e-10,52;UBERON:0007135,4.27e-10,52;UBERON:0003528,2.13e-09,29;UBERON:0002791,2.13e-09,29;UBERON:0001893,2.13e-09,29;UBERON:0000955,2.18e-08,47;UBERON:0006238,2.18e-08,47;UBERON:0002616,4.49e-08,46;UBERON:0001016,6.49e-08,75;UBERON:0007023,1.33e-07,51;UBERON:0001017,2.09e-07,73;UBERON:0000160,2.34e-07,31;UBERON:0011216,9.96e-07,194|phase1_expression=97.2103501926099,510.899996784025,402.21932762035,505.115232882406,503.400208596079,167.03987555233,166.799425385205,114.532387892678,132.62297626687,134.587102635146,102.388344998852,86.2337038739587,115.902894163426,123.699869422881,59.293537603188,52.8460447887446,47.570207712714,100.632430749278,102.561596337093,87.8486579221923,111.066536937297,94.0285307872384,93.7707243008778,194.550786116783,201.191939495908,383.012720064719,339.440452973351,289.593336729835,279.33442660087,300.419914673837,214.85686482499,28.5763803056834,32.5984337419822,0,75.6791243748339,81.9536801617367,74.7259843920271,244.003940719617,232.837932668093,227.209304884628,222.939733963754,193.984917728199,246.639259339826,91.149296214318,96.5108385209779,98.013965654338,106.405222831333,123.184213354952,154.219700279599,140.572817030707,128.927494316959,110.689474561028,137.917302179459,138.544169124167,147.209084024399,85.9246516360063,81.6620303825457,90.7582882408298,125.436205732951,133.834717755824,100.779193157482,103.347582281085,103.158196348892,226.324778896272,167.118415273819,201.776352644692,109.054440228699,133.707970251901,101.304751225383,98.2843231054708,106.845080366502,183.95923395605,171.614856319404,93.9504429978697,113.57688315661,64.3453150627015,192.70279174893,229.581833877168,228.105701885522,130.435538565162,154.614117688072,146.37665712645,242.889209131201,171.642596059662,180.454730624413,137.296920830729,151.768211731844,124.514829811301,139.639100506391,146.00425412631,85.510024166995,98.088321975878,45.5580793584193,67.4628989547271,44.8345728038892,54.2112533387776,97.4684275714358,134.810385159244,129.893002301434,123.668851078619,90.9848491757356,94.9615932865952,147.787039029854,156.434674693733,77.7202837230259,75.2478800461043,77.8507645322766,102.537123987716,138.27282986759,96.1905061140065,65.5774535175994,69.1136635768561,79.3317310560841,73.8540938707851,71.6115226456442,93.9986103145973,120.631144254374,72.7334765307156,95.5379396105864,77.1627874249142,87.8949243472366,81.4590425267173,98.7876334456047,165.128369514513,162.321197780428,189.549134964775,70.2116629604693,107.38258884782,73.3195210211583,210.90522028199,165.157717617524,122.136030253704,211.022724713424,255.715457330331,212.56716958443,189.984519052344,63.0385662233458,81.4865657496109,53.0717792710717,73.8650914161524,55.9517904739626,66.9015123901406,67.3432365472006,66.6115294833861,64.8387836912154,70.5906598769522,71.1196089408342,88.7352561634824,59.2811980565316,56.3536118900101,58.415773222431,56.9908904311695,55.331402595894,67.2126681387781,73.0526584248199,50.9527723055343,116.567389093997,107.571425173951,87.5223578138425,58.8237194000825,55.8172022755009,63.9220318186603,71.0234206755631,75.1639365275083,77.2878235565765,81.1543467178923,87.9936756590751,90.1428443074549,103.508145595579,99.4854832319317,97.768984312302,93.5679919522127,87.8200461164203,86.8315529379605,182.531675353662,133.77599609307,285.481828498001,231.923146963928,50.12273887578,51.7887778248778,78.8668863291211,93.3794719006076,104.962436694779,126.690266990964,230.621123910633,142.629294790993,136.726353587347,152.997526999645,151.292131604437,186.954437000078,181.339823844868,169.070940992958,75.6774924802796,63.8649185488384,63.116331976925,59.4661877308318,64.3922257396517,72.4503019466991,75.7573714748602,89.1565293796797,79.7553537434184,78.6039934181869,65.5160305862599,59.2300125292134,56.2158726023761,51.2685616237466,61.2637566593279,52.3354436662745,61.1102044275408,59.5531004523178,61.9356566280635,70.2877217761489,89.1362880469598,77.0331761673802,79.56960664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| ||
|EntrezGene=18738 | |||
|HGNC= | |||
|MCL_coexpression_id=240 | |||
|UniProt=P53810,Q5ND42 | |||
|association_with_transcript=0bp_to_ENSMUST00000143219,NM_008850,uc007keh.1,uc007kei.1_5end | |||
|description=CAGE_peak_1_at_Pitpna_5end | |||
|id=chr11:75401566..75401653,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000064!6.87e-13!99;UBERON:0002020!5.32e-11!34;UBERON:0001049!4.27e-10!52;UBERON:0005068!4.27e-10!52;UBERON:0006241!4.27e-10!52;UBERON:0007135!4.27e-10!52;UBERON:0000955!9.45e-10!50;UBERON:0006238!9.45e-10!50;UBERON:0002616!2.00e-09!49;UBERON:0002791!2.13e-09!29;UBERON:0003528!2.13e-09!29;UBERON:0001893!2.13e-09!29;UBERON:0000073!6.49e-08!75;UBERON:0001016!6.49e-08!75;UBERON:0007023!1.33e-07!51;UBERON:0001017!2.09e-07!73;UBERON:0005743!2.09e-07!73;UBERON:0007811!2.44e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.27e-11,54;UBERON:0002020,5.32e-11,34;UBERON:0001049,4.27e-10,52;UBERON:0005068,4.27e-10,52;UBERON:0006241,4.27e-10,52;UBERON:0007135,4.27e-10,52;UBERON:0003528,2.13e-09,29;UBERON:0002791,2.13e-09,29;UBERON:0001893,2.13e-09,29;UBERON:0000955,2.18e-08,47;UBERON:0006238,2.18e-08,47;UBERON:0002616,4.49e-08,46;UBERON:0001016,6.49e-08,75;UBERON:0007023,1.33e-07,51;UBERON:0001017,2.09e-07,73;UBERON:0000160,2.34e-07,31;UBERON:0011216,9.96e-07,194 | |||
|phase1_expression=97.2103501926099,510.899996784025,402.21932762035,505.115232882406,503.400208596079,167.03987555233,166.799425385205,114.532387892678,132.62297626687,134.587102635146,102.388344998852,86.2337038739587,115.902894163426,123.699869422881,59.293537603188,52.8460447887446,47.570207712714,100.632430749278,102.561596337093,87.8486579221923,111.066536937297,94.0285307872384,93.7707243008778,194.550786116783,201.191939495908,383.012720064719,339.440452973351,289.593336729835,279.33442660087,300.419914673837,214.85686482499,28.5763803056834,32.5984337419822,0,75.6791243748339,81.9536801617367,74.7259843920271,244.003940719617,232.837932668093,227.209304884628,222.939733963754,193.984917728199,246.639259339826,91.149296214318,96.5108385209779,98.013965654338,106.405222831333,123.184213354952,154.219700279599,140.572817030707,128.927494316959,110.689474561028,137.917302179459,138.544169124167,147.209084024399,85.9246516360063,81.6620303825457,90.7582882408298,125.436205732951,133.834717755824,100.779193157482,103.347582281085,103.158196348892,226.324778896272,167.118415273819,201.776352644692,109.054440228699,133.707970251901,101.304751225383,98.2843231054708,106.845080366502,183.95923395605,171.614856319404,93.9504429978697,113.57688315661,64.3453150627015,192.70279174893,229.581833877168,228.105701885522,130.435538565162,154.614117688072,146.37665712645,242.889209131201,171.642596059662,180.454730624413,137.296920830729,151.768211731844,124.514829811301,139.639100506391,146.00425412631,85.510024166995,98.088321975878,45.5580793584193,67.4628989547271,44.8345728038892,54.2112533387776,97.4684275714358,134.810385159244,129.893002301434,123.668851078619,90.9848491757356,94.9615932865952,147.787039029854,156.434674693733,77.7202837230259,75.2478800461043,77.8507645322766,102.537123987716,138.27282986759,96.1905061140065,65.5774535175994,69.1136635768561,79.3317310560841,73.8540938707851,71.6115226456442,93.9986103145973,120.631144254374,72.7334765307156,95.5379396105864,77.1627874249142,87.8949243472366,81.4590425267173,98.7876334456047,165.128369514513,162.321197780428,189.549134964775,70.2116629604693,107.38258884782,73.3195210211583,210.90522028199,165.157717617524,122.136030253704,211.022724713424,255.715457330331,212.56716958443,189.984519052344,63.0385662233458,81.4865657496109,53.0717792710717,73.8650914161524,55.9517904739626,66.9015123901406,67.3432365472006,66.6115294833861,64.8387836912154,70.5906598769522,71.1196089408342,88.7352561634824,59.2811980565316,56.3536118900101,58.415773222431,56.9908904311695,55.331402595894,67.2126681387781,73.0526584248199,50.9527723055343,116.567389093997,107.571425173951,87.5223578138425,58.8237194000825,55.8172022755009,63.9220318186603,71.0234206755631,75.1639365275083,77.2878235565765,81.1543467178923,87.9936756590751,90.1428443074549,103.508145595579,99.4854832319317,97.768984312302,93.5679919522127,87.8200461164203,86.8315529379605,182.531675353662,133.77599609307,285.481828498001,231.923146963928,50.12273887578,51.7887778248778,78.8668863291211,93.3794719006076,104.962436694779,126.690266990964,230.621123910633,142.629294790993,136.726353587347,152.997526999645,151.292131604437,186.954437000078,181.339823844868,169.070940992958,75.6774924802796,63.8649185488384,63.116331976925,59.4661877308318,64.3922257396517,72.4503019466991,75.7573714748602,89.1565293796797,79.7553537434184,78.6039934181869,65.5160305862599,59.2300125292134,56.2158726023761,51.2685616237466,61.2637566593279,52.3354436662745,61.1102044275408,59.5531004523178,61.9356566280635,70.2877217761489,89.1362880469598,77.0331761673802,79.569606644213,72.4901379708211,70.6825809276334,67.5420929908714,104.016046063798,61.5847088254075,68.9341850349769,66.0308383665482,68.7642427485311,75.0428033339334,77.8402705697265,99.5181604074774,92.8470998785465,84.3780467561833,100.775413791532,94.8768592204123,97.2216447904992,99.51855230408,171.90206369077,148.486251682508,130.317532350045,119.480611149949,251.422223920882,250.364162560946,100.656056461279,133.052178636705,54.5829219590124,49.5857205256731,57.7334705923901,54.2459171352293,56.3680645428457,58.8799184040771,55.8638768311354,52.6060544240361,57.7120155801924,153.912910566046,79.3445076314222,70.1578478448986,57.3362096924588,81.9901511173501,90.2666940711747,51.2267142287011,72.5576536715403,76.1964522213828,85.3422470425433,76.243916690094,100.011749456102,66.890206223861,76.6469363527151,94.1789538648732,104.364422489249,89.7279226259226,73.5349548428182,59.780283218395,69.4656131913392,67.9448401050148,70.9360934569094,65.4613560599599,76.6798436005884,66.068893957868,93.3993398093567,80.2843548573878,114.895295386635,79.4751739177934,64.2628418249704,70.1439316914453,72.8171298419132,73.0427003865523,192.377352175701,236.60268536541,75.1831875510552,74.0928855987969,73.3370328384058,58.9593270424683,70.2608330486069,76.8694661973916,76.4902934972349,76.6933958733646,84.5783839683074,121.243168487919,55.3587988766987,68.9252993560017,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| |||
|short_description=p1@Pitpna | |||
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Revision as of 20:54, 12 September 2013
Short description: | p1@Pitpna |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Pitpna_5end |
Coexpression cluster: | MCL_coexpression_mm9:240 |
Association with transcript: | 0bp_to_ENSMUST00000143219, NM_008850, uc007keh.1, uc007kei.1_5end |
EntrezGene: | Pitpna |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 5.27e-11 | 54 |
gray matter | 5.32e-11 | 34 |
neural tube | 4.27e-10 | 52 |
neural rod | 4.27e-10 | 52 |
future spinal cord | 4.27e-10 | 52 |
neural keel | 4.27e-10 | 52 |
brain grey matter | 2.13e-09 | 29 |
regional part of telencephalon | 2.13e-09 | 29 |
telencephalon | 2.13e-09 | 29 |
brain | 2.18e-08 | 47 |
future brain | 2.18e-08 | 47 |
regional part of brain | 4.49e-08 | 46 |
nervous system | 6.49e-08 | 75 |
adult organism | 1.33e-07 | 51 |
central nervous system | 2.09e-07 | 73 |
intestine | 2.34e-07 | 31 |
organ system subdivision | 9.96e-07 | 194 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.