FFCP PHASE1:Mm9::chr11:76659359..76659363,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=34|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:76659359..76659363,+|id=chr11:76659359..76659363,+|ontology_enrichment_celltype=CL:0000791!1.76e-33!9;CL:0000789!1.76e-33!9;CL:0002420!1.76e-33!9;CL:0002419!1.76e-33!9;CL:0000790!1.76e-33!9;CL:0000838!8.26e-31!12;CL:0000624!1.15e-29!8;CL:0000542!2.54e-28!13;CL:0000051!2.54e-28!13;CL:0000084!3.65e-27!11;CL:0000827!3.65e-27!11;CL:0000893!5.62e-22!6;CL:0002489!5.62e-22!6;CL:0000898!5.62e-22!6;CL:0000809!5.62e-22!6;CL:0000810!5.62e-22!6;CL:0000895!5.62e-22!6;CL:0000808!5.62e-22!6;CL:0000894!5.62e-22!6;CL:0000806!5.62e-22!6;CL:0000807!5.62e-22!6;CL:0000805!5.62e-22!6;CL:0002425!5.62e-22!6;CL:0002436!5.62e-22!6;CL:0002427!5.62e-22!6;CL:0002428!5.62e-22!6;CL:0002429!5.62e-22!6;CL:0002433!5.62e-22!6;CL:0002431!5.62e-22!6;CL:0002432!5.62e-22!6;CL:0000738!2.73e-21!17;CL:0002087!2.73e-21!17;CL:0000988!2.53e-18!32;CL:0002032!2.53e-18!32;CL:0000037!2.53e-18!32;CL:0000566!2.53e-18!32;CL:0000837!2.53e-18!32;CL:0002320!3.92e-14!46;CL:0000134!3.92e-14!46;CL:0002031!5.76e-14!25;CL:0000034!6.42e-13!97;CL:0000219!1.15e-11!54;CL:0000063!1.48e-10!66;CL:0000144!1.16e-09!121;CL:0000012!1.16e-09!121;CL:0000723!2.72e-09!91;CL:0000048!2.72e-09!91|ontology_enrichment_celltype_v019_2=CL:0000838,1.21e-22,12;CL:0000542,6.23e-21,13;CL:0000051,6.23e-21,13;CL:0000791,1.15e-19,9;CL:0000789,1.15e-19,9;CL:0002420,1.15e-19,9;CL:0002419,1.15e-19,9;CL:0000790,1.15e-19,9;CL:0000084,3.45e-16,11;CL:0000827,3.45e-16,11;CL:0000738,4.35e-16,17;CL:0002087,4.35e-16,17;CL:0000624,6.16e-13,8;CL:0000815,4.30e-12,1;CL:0000792,4.30e-12,1;CL:0000625,5.53e-12,1;CL:0000945,7.11e-12,1;CL:0000236,7.11e-12,1;CL:0000826,7.11e-12,1;CL:0002031,5.02e-11,25;CL:0000988,1.17e-08,32;CL:0002032,1.17e-08,32;CL:0000037,1.17e-08,32;CL:0000837,1.17e-08,32;CL:0000034,3.71e-07,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!3.92e-14!46;UBERON:0003408!6.29e-07!24|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,1.16210991097419,0.140788722151667,1.63845168425395,0.171217968225505,0.478632953972018,0.171200729931206,0.0874204024189974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0.418531630736908,0,0.523523743973798,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,1.00669563634642,1.45072428402269,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.958520996047362,0,0.762421362438388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51469581422943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136694227721025,0,3.90950388985867,2.51912614182584,2.62579950228405,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr11:76659359..76659363,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=34 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:76659359..76659363,+ | |||
|id=chr11:76659359..76659363,+ | |||
|ontology_enrichment_celltype=CL:0000791!1.76e-33!9;CL:0000789!1.76e-33!9;CL:0002420!1.76e-33!9;CL:0002419!1.76e-33!9;CL:0000790!1.76e-33!9;CL:0000838!8.26e-31!12;CL:0000624!1.15e-29!8;CL:0000542!2.54e-28!13;CL:0000051!2.54e-28!13;CL:0000084!3.65e-27!11;CL:0000827!3.65e-27!11;CL:0000893!5.62e-22!6;CL:0002489!5.62e-22!6;CL:0000898!5.62e-22!6;CL:0000809!5.62e-22!6;CL:0000810!5.62e-22!6;CL:0000895!5.62e-22!6;CL:0000808!5.62e-22!6;CL:0000894!5.62e-22!6;CL:0000806!5.62e-22!6;CL:0000807!5.62e-22!6;CL:0000805!5.62e-22!6;CL:0002425!5.62e-22!6;CL:0002436!5.62e-22!6;CL:0002427!5.62e-22!6;CL:0002428!5.62e-22!6;CL:0002429!5.62e-22!6;CL:0002433!5.62e-22!6;CL:0002431!5.62e-22!6;CL:0002432!5.62e-22!6;CL:0000738!2.73e-21!17;CL:0002087!2.73e-21!17;CL:0000988!2.53e-18!32;CL:0002032!2.53e-18!32;CL:0000037!2.53e-18!32;CL:0000566!2.53e-18!32;CL:0000837!2.53e-18!32;CL:0002320!3.92e-14!46;CL:0000134!3.92e-14!46;CL:0002031!5.76e-14!25;CL:0000034!6.42e-13!97;CL:0000219!1.15e-11!54;CL:0000063!1.48e-10!66;CL:0000144!1.16e-09!121;CL:0000012!1.16e-09!121;CL:0000723!2.72e-09!91;CL:0000048!2.72e-09!91 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.21e-22,12;CL:0000542,6.23e-21,13;CL:0000051,6.23e-21,13;CL:0000791,1.15e-19,9;CL:0000789,1.15e-19,9;CL:0002420,1.15e-19,9;CL:0002419,1.15e-19,9;CL:0000790,1.15e-19,9;CL:0000084,3.45e-16,11;CL:0000827,3.45e-16,11;CL:0000738,4.35e-16,17;CL:0002087,4.35e-16,17;CL:0000624,6.16e-13,8;CL:0000815,4.30e-12,1;CL:0000792,4.30e-12,1;CL:0000625,5.53e-12,1;CL:0000945,7.11e-12,1;CL:0000236,7.11e-12,1;CL:0000826,7.11e-12,1;CL:0002031,5.02e-11,25;CL:0000988,1.17e-08,32;CL:0002032,1.17e-08,32;CL:0000037,1.17e-08,32;CL:0000837,1.17e-08,32;CL:0000034,3.71e-07,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!3.92e-14!46;UBERON:0003408!6.29e-07!24 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,1.16210991097419,0.140788722151667,1.63845168425395,0.171217968225505,0.478632953972018,0.171200729931206,0.0874204024189974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0.418531630736908,0,0.523523743973798,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,1.00669563634642,1.45072428402269,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.958520996047362,0,0.762421362438388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51469581422943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136694227721025,0,3.90950388985867,2.51912614182584,2.62579950228405,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:76659359..76659363,+ | |||
}} |
Revision as of 20:58, 12 September 2013
Short description: | p@chr11:76659359..76659363, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:76659359..76659363, + |
Coexpression cluster: | MCL_coexpression_mm9:34 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.21e-22 | 12 |
lymphocyte | 6.23e-21 | 13 |
common lymphoid progenitor | 6.23e-21 | 13 |
mature alpha-beta T cell | 1.15e-19 | 9 |
alpha-beta T cell | 1.15e-19 | 9 |
immature T cell | 1.15e-19 | 9 |
mature T cell | 1.15e-19 | 9 |
immature alpha-beta T cell | 1.15e-19 | 9 |
T cell | 3.45e-16 | 11 |
pro-T cell | 3.45e-16 | 11 |
leukocyte | 4.35e-16 | 17 |
nongranular leukocyte | 4.35e-16 | 17 |
CD4-positive, alpha-beta T cell | 6.16e-13 | 8 |
regulatory T cell | 4.30e-12 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 4.30e-12 | 1 |
CD8-positive, alpha-beta T cell | 5.53e-12 | 1 |
lymphocyte of B lineage | 7.11e-12 | 1 |
B cell | 7.11e-12 | 1 |
pro-B cell | 7.11e-12 | 1 |
hematopoietic lineage restricted progenitor cell | 5.02e-11 | 25 |
hematopoietic cell | 1.17e-08 | 32 |
hematopoietic oligopotent progenitor cell | 1.17e-08 | 32 |
hematopoietic stem cell | 1.17e-08 | 32 |
hematopoietic multipotent progenitor cell | 1.17e-08 | 32 |
stem cell | 3.71e-07 | 97 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.