FFCP PHASE1:Hg19::chr3:118905564..118905595,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7348|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=12578|TSSclassifier=S|UniProt=C9J9M7|association_with_transcript=0bp_to_ENST00000460625_5end|coexpression_cluster_id=C1849|description=CAGE_peak_4_at_UPK1B_5end|id=chr3:118905564..118905595,+|ontology_enrichment_celltype=CL:0002541!6.32e-15!3;CL:0002537!1.30e-09!5;CL:0000080!3.36e-08!6|ontology_enrichment_celltype_v019=CL:0002537;1.10e-20;5!CL:0000349;2.07e-12;19!CL:0002541;1.30e-09;3|ontology_enrichment_celltype_v019_2=CL:0002537,1.10e-20,5;CL:0000349,2.07e-12,19;CL:0002541,1.30e-09,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000478!2.23e-22!24;UBERON:0005631!9.63e-21!14;UBERON:0000158!9.63e-21!14;UBERON:0003124!1.39e-16!7;UBERON:0000476!6.32e-15!3;UBERON:0000920!6.32e-15!3;UBERON:0000305!5.65e-07!7|ontology_enrichment_uberon_v019=UBERON:0000478;4.77e-37;24!UBERON:0002331;5.74e-23;10!UBERON:0005631;6.92e-23;10!UBERON:0000158;6.92e-23;10!UBERON:0000178;1.41e-15;15!UBERON:0000179;1.41e-15;15!UBERON:0000463;1.41e-15;15!UBERON:0000305;4.37e-15;7!UBERON:0003124;1.30e-09;3!UBERON:0000920;1.30e-09;3!UBERON:0002390;9.82e-08;32|ontology_enrichment_uberon_v019_2=UBERON:0000478,4.63e-37,24;UBERON:0002331,5.53e-23,10;UBERON:0000358,5.53e-23,10;UBERON:0000307,5.53e-23,10;UBERON:0000091,5.53e-23,10;UBERON:0000087,5.53e-23,10;UBERON:0007010,5.53e-23,10;UBERON:0007806,5.53e-23,10;UBERON:0008780,5.53e-23,10;UBERON:0005728,5.53e-23,10;UBERON:0005631,1.41e-16,14;UBERON:0000158,1.41e-16,14;UBERON:0000178,1.37e-15,15;UBERON:0000179,1.37e-15,15;UBERON:0000463,1.37e-15,15;UBERON:0000305,4.37e-15,7;UBERON:0004871,2.49e-13,8;UBERON:0000920,1.30e-09,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.599837947092342,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.29740072527842,0.593929361665277,4.30024982938925,0,0,0,15.8211719257689,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0.0915975934018623,5.33034776018635,0,0,0,0,0,0,0,0,0,0.652931232636591,0,0,0,0,0,1.77912677208373,8.5259117873087,7.93606816241461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38847790668105,0,0.174118413160805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0.857766365499703,0,0,0,0,0,0.308801447160972,0,0,0.38582807654183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0.258355639344024,0.0620747142958579,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p4@UPK1B}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=7348 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12578 | |||
|TSSclassifier=S | |||
|UniProt=C9J9M7 | |||
|association_with_transcript=0bp_to_ENST00000460625_5end | |||
|coexpression_cluster_id=C1849 | |||
|description=CAGE_peak_4_at_UPK1B_5end | |||
|id=chr3:118905564..118905595,+ | |||
|ontology_enrichment_celltype=CL:0002541!6.32e-15!3;CL:0002537!1.30e-09!5;CL:0000080!3.36e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0002537;1.10e-20;5!CL:0000349;2.07e-12;19!CL:0002541;1.30e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,1.10e-20,5;CL:0000349,2.07e-12,19;CL:0002541,1.30e-09,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000478!2.23e-22!24;UBERON:0005631!9.63e-21!14;UBERON:0000158!9.63e-21!14;UBERON:0003124!1.39e-16!7;UBERON:0000476!6.32e-15!3;UBERON:0000920!6.32e-15!3;UBERON:0000305!5.65e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;4.77e-37;24!UBERON:0002331;5.74e-23;10!UBERON:0005631;6.92e-23;10!UBERON:0000158;6.92e-23;10!UBERON:0000178;1.41e-15;15!UBERON:0000179;1.41e-15;15!UBERON:0000463;1.41e-15;15!UBERON:0000305;4.37e-15;7!UBERON:0003124;1.30e-09;3!UBERON:0000920;1.30e-09;3!UBERON:0002390;9.82e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000478,4.63e-37,24;UBERON:0002331,5.53e-23,10;UBERON:0000358,5.53e-23,10;UBERON:0000307,5.53e-23,10;UBERON:0000091,5.53e-23,10;UBERON:0000087,5.53e-23,10;UBERON:0007010,5.53e-23,10;UBERON:0007806,5.53e-23,10;UBERON:0008780,5.53e-23,10;UBERON:0005728,5.53e-23,10;UBERON:0005631,1.41e-16,14;UBERON:0000158,1.41e-16,14;UBERON:0000178,1.37e-15,15;UBERON:0000179,1.37e-15,15;UBERON:0000463,1.37e-15,15;UBERON:0000305,4.37e-15,7;UBERON:0004871,2.49e-13,8;UBERON:0000920,1.30e-09,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.599837947092342,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.29740072527842,0.593929361665277,4.30024982938925,0,0,0,15.8211719257689,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0.0915975934018623,5.33034776018635,0,0,0,0,0,0,0,0,0,0.652931232636591,0,0,0,0,0,1.77912677208373,8.5259117873087,7.93606816241461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38847790668105,0,0.174118413160805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0.857766365499703,0,0,0,0,0,0.308801447160972,0,0,0.38582807654183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0.258355639344024,0.0620747142958579,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@UPK1B | |||
}} |
Revision as of 20:59, 12 September 2013
Short description: | p4@UPK1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_UPK1B_5end |
Coexpression cluster: | C1849_anaplastic_cord_hairy_mycosis_adult_myeloma_NK |
Association with transcript: | 0bp_to_ENST00000460625_5end |
EntrezGene: | UPK1B |
HGNC: | 12578 |
UniProt: | C9J9M7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 1.10e-20 | 5 |
extraembryonic cell | 2.07e-12 | 19 |
chorionic membrane mesenchymal stem cell | 1.30e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic structure | 4.63e-37 | 24 |
umbilical cord | 5.53e-23 | 10 |
blastocyst | 5.53e-23 | 10 |
blastula | 5.53e-23 | 10 |
bilaminar disc | 5.53e-23 | 10 |
inner cell mass | 5.53e-23 | 10 |
cleaving embryo | 5.53e-23 | 10 |
connecting stalk | 5.53e-23 | 10 |
inner cell mass derived epiblast | 5.53e-23 | 10 |
extraembryonic mesoderm | 5.53e-23 | 10 |
extraembryonic membrane | 1.41e-16 | 14 |
membranous layer | 1.41e-16 | 14 |
blood | 1.37e-15 | 15 |
haemolymphatic fluid | 1.37e-15 | 15 |
organism substance | 1.37e-15 | 15 |
amnion | 4.37e-15 | 7 |
somatic layer of lateral plate mesoderm | 2.49e-13 | 8 |
egg chorion | 1.30e-09 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.