FFCP PHASE1:Mm9::chr12:8349738..8349761,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:8349738..8349761,+|id=chr12:8349738..8349761,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000192,5.97e-33,3;CL:0000359,5.97e-33,3;CL:0002539,5.97e-33,3;CL:0000514,5.97e-33,3;CL:0002476,5.10e-23,2;CL:0000680,6.79e-17,6;CL:0000187,6.79e-17,6;CL:0000056,6.79e-17,6;CL:0000222,1.37e-14,7;CL:0002194,4.91e-12,4;CL:0000766,4.91e-12,4;CL:0000234,4.91e-12,4;CL:0000576,4.91e-12,4;CL:0000235,4.91e-12,4;CL:0000864,4.91e-12,4;CL:0002009,4.91e-12,4;CL:0000040,4.91e-12,4;CL:0000559,4.91e-12,4;CL:0000355,1.66e-11,9;CL:0000473,2.84e-07,7;CL:0000557,2.84e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001135,5.97e-33,3;UBERON:0004237,5.97e-33,3;UBERON:0004695,5.97e-33,3;UBERON:0002111,5.97e-33,3;UBERON:0004178,5.97e-33,3;UBERON:0000947,6.19e-25,4;UBERON:0001637,6.19e-25,4;UBERON:0004573,6.19e-25,4;UBERON:0003509,6.19e-25,4;UBERON:0004571,6.19e-25,4;UBERON:0010191,6.19e-25,4;UBERON:0004572,6.19e-25,4;UBERON:0000055,4.09e-20,5;UBERON:0007500,4.09e-20,5;UBERON:0001981,4.09e-20,5;UBERON:0002049,4.09e-20,5;UBERON:0007798,4.09e-20,5;UBERON:0004537,4.09e-20,5;UBERON:0006965,4.09e-20,5;UBERON:0001134,1.66e-11,9;UBERON:0002036,1.66e-11,9;UBERON:0002385,1.66e-11,9;UBERON:0000486,1.66e-11,9;UBERON:0007503,1.66e-11,9;UBERON:0001015,1.66e-11,9;UBERON:0002329,1.66e-11,9;UBERON:0003082,1.66e-11,9;UBERON:0003059,1.66e-11,9;UBERON:0007282,1.66e-11,9;UBERON:0004290,1.66e-11,9;UBERON:0009618,1.66e-11,9;UBERON:0000383,2.01e-10,10;UBERON:0007524,1.56e-09,11;UBERON:0003077,1.56e-09,11;UBERON:0007285,1.56e-09,11;UBERON:0002204,9.31e-09,32|phase1_expression=0.480446541314382,0,0,0,0.500895729946347,0,0.467225281191051,0,0,0.234064526321993,0,0,0,0.437102012094987,0,0.202475267389826,0,0,0,0,0.765389611359628,0,0,0.47997726838022,0.68822784320151,0,0,0,0.950117097281869,0.252030129759931,0.443461021310609,0,0,0,0,0.166234645358492,0,0,0,0,0.588231488031014,0,0.485510353031154,2.26614272356039,1.01376931219515,1.65192076945513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0.449949858640699,0,0,0,0.384218305321555,0,0,0.210324961351382,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302904773332736,0.0755715601067855,0,0,0,0,0,0,0.421333260395256,1.1930122580464,4.41636207824877,0.70667914902068,0,2.56652954828636,0,0,0.432982082022428,0.253359865475099,0,0.79928715803342,0,0,0,0,0,0,0.117588707135705,0.376999773989026,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0.127070227073065,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0.134206418760372,0,0,0,0,0,0,0,0.201683524623343,0,0,0,0.494096864172033,0.502670417600539,0.198956472041151,0.19496408711912,0,0,0.199141273254367,0,0,0,0,0.193952487167626,0,0.126473074248515,0.147610147979602,0.156998727841375,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0.358794827043824,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0.159454768657487,0.327726629431476,0,0,4.52373851817817,1.63171705145613,0,0.275936746304732,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35613120733451,0,0.164970122972535,0,0,0,0,0,0,0,0,0.356497378384721,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206386867963223,0,0,0,0,0.169978429993855,0,0,0,0,0,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,0,0,0,0.194451188344048,0.258319646955462,0.337912250981556,0,0,0,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0.179427713218951,0.167884616364078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr12:8349738..8349761,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:8349738..8349761,+ | |||
|id=chr12:8349738..8349761,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,5.97e-33,3;CL:0000359,5.97e-33,3;CL:0002539,5.97e-33,3;CL:0000514,5.97e-33,3;CL:0002476,5.10e-23,2;CL:0000680,6.79e-17,6;CL:0000187,6.79e-17,6;CL:0000056,6.79e-17,6;CL:0000222,1.37e-14,7;CL:0002194,4.91e-12,4;CL:0000766,4.91e-12,4;CL:0000234,4.91e-12,4;CL:0000576,4.91e-12,4;CL:0000235,4.91e-12,4;CL:0000864,4.91e-12,4;CL:0002009,4.91e-12,4;CL:0000040,4.91e-12,4;CL:0000559,4.91e-12,4;CL:0000355,1.66e-11,9;CL:0000473,2.84e-07,7;CL:0000557,2.84e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,5.97e-33,3;UBERON:0004237,5.97e-33,3;UBERON:0004695,5.97e-33,3;UBERON:0002111,5.97e-33,3;UBERON:0004178,5.97e-33,3;UBERON:0000947,6.19e-25,4;UBERON:0001637,6.19e-25,4;UBERON:0004573,6.19e-25,4;UBERON:0003509,6.19e-25,4;UBERON:0004571,6.19e-25,4;UBERON:0010191,6.19e-25,4;UBERON:0004572,6.19e-25,4;UBERON:0000055,4.09e-20,5;UBERON:0007500,4.09e-20,5;UBERON:0001981,4.09e-20,5;UBERON:0002049,4.09e-20,5;UBERON:0007798,4.09e-20,5;UBERON:0004537,4.09e-20,5;UBERON:0006965,4.09e-20,5;UBERON:0001134,1.66e-11,9;UBERON:0002036,1.66e-11,9;UBERON:0002385,1.66e-11,9;UBERON:0000486,1.66e-11,9;UBERON:0007503,1.66e-11,9;UBERON:0001015,1.66e-11,9;UBERON:0002329,1.66e-11,9;UBERON:0003082,1.66e-11,9;UBERON:0003059,1.66e-11,9;UBERON:0007282,1.66e-11,9;UBERON:0004290,1.66e-11,9;UBERON:0009618,1.66e-11,9;UBERON:0000383,2.01e-10,10;UBERON:0007524,1.56e-09,11;UBERON:0003077,1.56e-09,11;UBERON:0007285,1.56e-09,11;UBERON:0002204,9.31e-09,32 | |||
|phase1_expression=0.480446541314382,0,0,0,0.500895729946347,0,0.467225281191051,0,0,0.234064526321993,0,0,0,0.437102012094987,0,0.202475267389826,0,0,0,0,0.765389611359628,0,0,0.47997726838022,0.68822784320151,0,0,0,0.950117097281869,0.252030129759931,0.443461021310609,0,0,0,0,0.166234645358492,0,0,0,0,0.588231488031014,0,0.485510353031154,2.26614272356039,1.01376931219515,1.65192076945513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0.449949858640699,0,0,0,0.384218305321555,0,0,0.210324961351382,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302904773332736,0.0755715601067855,0,0,0,0,0,0,0.421333260395256,1.1930122580464,4.41636207824877,0.70667914902068,0,2.56652954828636,0,0,0.432982082022428,0.253359865475099,0,0.79928715803342,0,0,0,0,0,0,0.117588707135705,0.376999773989026,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0.127070227073065,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0.134206418760372,0,0,0,0,0,0,0,0.201683524623343,0,0,0,0.494096864172033,0.502670417600539,0.198956472041151,0.19496408711912,0,0,0.199141273254367,0,0,0,0,0.193952487167626,0,0.126473074248515,0.147610147979602,0.156998727841375,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0.358794827043824,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0.159454768657487,0.327726629431476,0,0,4.52373851817817,1.63171705145613,0,0.275936746304732,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35613120733451,0,0.164970122972535,0,0,0,0,0,0,0,0,0.356497378384721,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206386867963223,0,0,0,0,0.169978429993855,0,0,0,0,0,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,0,0,0,0.194451188344048,0.258319646955462,0.337912250981556,0,0,0,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0.179427713218951,0.167884616364078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:8349738..8349761,+ | |||
}} |
Revision as of 23:24, 12 September 2013
Short description: | p@chr12:8349738..8349761, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:8349738..8349761, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 5.97e-33 | 3 |
vascular associated smooth muscle cell | 5.97e-33 | 3 |
aortic smooth muscle cell | 5.97e-33 | 3 |
smooth muscle myoblast | 5.97e-33 | 3 |
bone marrow macrophage | 5.10e-23 | 2 |
muscle precursor cell | 6.79e-17 | 6 |
muscle cell | 6.79e-17 | 6 |
myoblast | 6.79e-17 | 6 |
mesodermal cell | 1.37e-14 | 7 |
monopoietic cell | 4.91e-12 | 4 |
myeloid leukocyte | 4.91e-12 | 4 |
phagocyte | 4.91e-12 | 4 |
monocyte | 4.91e-12 | 4 |
macrophage | 4.91e-12 | 4 |
tissue-resident macrophage | 4.91e-12 | 4 |
macrophage dendritic cell progenitor | 4.91e-12 | 4 |
monoblast | 4.91e-12 | 4 |
promonocyte | 4.91e-12 | 4 |
multi-potent skeletal muscle stem cell | 1.66e-11 | 9 |
defensive cell | 2.84e-07 | 7 |
granulocyte monocyte progenitor cell | 2.84e-07 | 7 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.