FFCP PHASE1:Mm9::chr13:16118975..16118996,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1638|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:16118975..16118996,+|id=chr13:16118975..16118996,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000680,3.15e-12,6;CL:0000187,3.15e-12,6;CL:0000056,3.15e-12,6;CL:0000355,2.47e-11,9;CL:0000222,1.94e-10,7;CL:0000068,2.04e-10,3;CL:0002202,2.04e-10,3;CL:0000069,2.04e-10,3;CL:0002632,2.04e-10,3;CL:0002368,2.04e-10,3;CL:0000307,2.04e-10,3;CL:0000377,2.04e-10,3;CL:0000192,9.29e-10,3;CL:0000359,9.29e-10,3;CL:0002539,9.29e-10,3;CL:0000514,9.29e-10,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003914!5.44e-07!47|ontology_enrichment_uberon_v019_2=UBERON:0001134,2.47e-11,9;UBERON:0002036,2.47e-11,9;UBERON:0002385,2.47e-11,9;UBERON:0000486,2.47e-11,9;UBERON:0007503,2.47e-11,9;UBERON:0001015,2.47e-11,9;UBERON:0002329,2.47e-11,9;UBERON:0003082,2.47e-11,9;UBERON:0003059,2.47e-11,9;UBERON:0007282,2.47e-11,9;UBERON:0004290,2.47e-11,9;UBERON:0009618,2.47e-11,9;UBERON:0003126,2.04e-10,3;UBERON:0001005,2.04e-10,3;UBERON:0007196,2.04e-10,3;UBERON:0001558,2.04e-10,3;UBERON:0000383,3.89e-10,10;UBERON:0001135,9.29e-10,3;UBERON:0004237,9.29e-10,3;UBERON:0004695,9.29e-10,3;UBERON:0002111,9.29e-10,3;UBERON:0004178,9.29e-10,3;UBERON:0007524,3.71e-09,11;UBERON:0003077,3.71e-09,11;UBERON:0007285,3.71e-09,11;UBERON:0003133,1.45e-08,24;UBERON:0005156,8.70e-08,26;UBERON:0000990,8.70e-08,26;UBERON:0000947,2.05e-07,4;UBERON:0001637,2.05e-07,4;UBERON:0004573,2.05e-07,4;UBERON:0003509,2.05e-07,4;UBERON:0004571,2.05e-07,4;UBERON:0010191,2.05e-07,4;UBERON:0004572,2.05e-07,4;UBERON:0005256,4.80e-07,45;UBERON:0005795,6.04e-07,4;UBERON:0000995,6.04e-07,4;UBERON:0001987,7.42e-07,2;UBERON:0003124,7.42e-07,2;UBERON:0004340,7.42e-07,2|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67412652294763,0,0.523523743973798,1.17646297606203,2.04913645487534,0.485510353031154,4.02869817521847,2.33166941804883,1.65192076945513,0,0,0,0,0.139986421625363,0,0,0,0,2.57259436035947,0.286533439938757,1.03134418455488,0,0,0,0,0,0.449949858640699,0,0.7104801149461,0,0,0.103689612308478,0.135005938331691,0,0,0,0.489963196859816,0.0958454710182364,0,0,0,0.307213066512487,0,0,0,0,0,0.15279824777681,0,0,0,0.832988126665025,0.226714680320357,0,0,0.679971333707751,0,1.94932925234301,0,0.140444420131752,1.1930122580464,0.779358013808606,0.70667914902068,0,1.28326477414318,0,0,4.5463118612355,4.05375784760158,7.07734223020697,0,0,0,0,0.304465478312141,0.230615497256059,0.150722640552623,1.41106448562846,0,0.988779870937496,0,0,0.161766849947409,0,0.484875253135222,0,0.292780797011547,0.209446706813455,0.255457055208591,0,0,0,0.149790639404823,0,0.502617408451458,0.869121600961382,0,0.20778804455956,0,2.03678727700633,0.497627882440372,0,0,0.130120442962704,0,0,0.452114453507145,0,0.2562274405697,0.0937017245597288,0,0,0,0,0.219195732427575,0.556094498451196,0.348252166522167,0.205782136407943,0.59710280045548,0,0,0,0,1.40715635988658,0.36012412292203,0.23674473558521,0.393528463494808,0.771335564436891,0.930135779001631,0.536546802799238,0,0.658239399653922,0.492502392237286,0.0810688095458557,0.146199987425332,0.219550115291051,0,0,0.205809224758569,0,0,0,0.232236671860439,0,0,0,0,0.474529061544512,0.329397909448022,0,0.397912944082302,0.19496408711912,0,0.216138049874694,0,0,0,0,0,0,0.140271639780637,0,0,0.156998727841375,0,0.296452627087149,0,0,0,0,0,0.50925170356284,0.575392274901621,0.486405680325106,1.37280706594041,5.75072826109418,1.11642284300551,0.312037673114561,0.757736633841335,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0.221464689648775,0,0,0.172684981865896,0.144649058581512,0,0,0,0.275936746304732,0.160550589987792,0.117211686592203,0.327869890753351,0,0.315508219416257,0.780877488593277,0.215423397732799,0,0,0,0.809621403349789,0.292255857911312,0.395287777946524,0.642642632843614,2.41298144854057,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,1.17335854031855,4.66030555900404,0.220528398054962,0,0,0.0603129249281559,0.238744688006273,0.164140899745061,0,0,0,0,0,0.753473828018764,0,0,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0.269728692769641,0.165306911450672,0,0,0,0,0.299033092087958,0.330916980914195,0.583353565032143,1.80823752868824,9.79945527846513,7.04143431874524,1.0416350787516,0.419437377702843,0,0,0,0,0.205421914329655,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269141569828427,0.335769232728157,0,1.12609485270709,0.183151624267265,0,0,1.12950368523413,0,0,0.171853182343688,0.685082519770642,0.755393897389701,0.675022500231806,0.45032120322422,1.81256963593682,1.55328093525546,0,0,0,0.243106717068294,0.209613162627982,0,0,0,0,0,0.25347929989024,0,0.187283014939765,0.128050304809739,0.0574354689556133,0,0,0,0,0.147198920134397,0.685738504770831,0.177475806159338,0,0.145346416632329,0.188218760830661,0.169229215783353,0,0.263069711437843,0,0,0,0.0985044823755635,0.818462086339379,0.154936841185966,0,0.249810577937946,0,0.429742108096597,0,0,0|short_description=p@chr13:16118975..16118996,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1638 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:16118975..16118996,+ | |||
|id=chr13:16118975..16118996,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,3.15e-12,6;CL:0000187,3.15e-12,6;CL:0000056,3.15e-12,6;CL:0000355,2.47e-11,9;CL:0000222,1.94e-10,7;CL:0000068,2.04e-10,3;CL:0002202,2.04e-10,3;CL:0000069,2.04e-10,3;CL:0002632,2.04e-10,3;CL:0002368,2.04e-10,3;CL:0000307,2.04e-10,3;CL:0000377,2.04e-10,3;CL:0000192,9.29e-10,3;CL:0000359,9.29e-10,3;CL:0002539,9.29e-10,3;CL:0000514,9.29e-10,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!5.44e-07!47 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,2.47e-11,9;UBERON:0002036,2.47e-11,9;UBERON:0002385,2.47e-11,9;UBERON:0000486,2.47e-11,9;UBERON:0007503,2.47e-11,9;UBERON:0001015,2.47e-11,9;UBERON:0002329,2.47e-11,9;UBERON:0003082,2.47e-11,9;UBERON:0003059,2.47e-11,9;UBERON:0007282,2.47e-11,9;UBERON:0004290,2.47e-11,9;UBERON:0009618,2.47e-11,9;UBERON:0003126,2.04e-10,3;UBERON:0001005,2.04e-10,3;UBERON:0007196,2.04e-10,3;UBERON:0001558,2.04e-10,3;UBERON:0000383,3.89e-10,10;UBERON:0001135,9.29e-10,3;UBERON:0004237,9.29e-10,3;UBERON:0004695,9.29e-10,3;UBERON:0002111,9.29e-10,3;UBERON:0004178,9.29e-10,3;UBERON:0007524,3.71e-09,11;UBERON:0003077,3.71e-09,11;UBERON:0007285,3.71e-09,11;UBERON:0003133,1.45e-08,24;UBERON:0005156,8.70e-08,26;UBERON:0000990,8.70e-08,26;UBERON:0000947,2.05e-07,4;UBERON:0001637,2.05e-07,4;UBERON:0004573,2.05e-07,4;UBERON:0003509,2.05e-07,4;UBERON:0004571,2.05e-07,4;UBERON:0010191,2.05e-07,4;UBERON:0004572,2.05e-07,4;UBERON:0005256,4.80e-07,45;UBERON:0005795,6.04e-07,4;UBERON:0000995,6.04e-07,4;UBERON:0001987,7.42e-07,2;UBERON:0003124,7.42e-07,2;UBERON:0004340,7.42e-07,2 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67412652294763,0,0.523523743973798,1.17646297606203,2.04913645487534,0.485510353031154,4.02869817521847,2.33166941804883,1.65192076945513,0,0,0,0,0.139986421625363,0,0,0,0,2.57259436035947,0.286533439938757,1.03134418455488,0,0,0,0,0,0.449949858640699,0,0.7104801149461,0,0,0.103689612308478,0.135005938331691,0,0,0,0.489963196859816,0.0958454710182364,0,0,0,0.307213066512487,0,0,0,0,0,0.15279824777681,0,0,0,0.832988126665025,0.226714680320357,0,0,0.679971333707751,0,1.94932925234301,0,0.140444420131752,1.1930122580464,0.779358013808606,0.70667914902068,0,1.28326477414318,0,0,4.5463118612355,4.05375784760158,7.07734223020697,0,0,0,0,0.304465478312141,0.230615497256059,0.150722640552623,1.41106448562846,0,0.988779870937496,0,0,0.161766849947409,0,0.484875253135222,0,0.292780797011547,0.209446706813455,0.255457055208591,0,0,0,0.149790639404823,0,0.502617408451458,0.869121600961382,0,0.20778804455956,0,2.03678727700633,0.497627882440372,0,0,0.130120442962704,0,0,0.452114453507145,0,0.2562274405697,0.0937017245597288,0,0,0,0,0.219195732427575,0.556094498451196,0.348252166522167,0.205782136407943,0.59710280045548,0,0,0,0,1.40715635988658,0.36012412292203,0.23674473558521,0.393528463494808,0.771335564436891,0.930135779001631,0.536546802799238,0,0.658239399653922,0.492502392237286,0.0810688095458557,0.146199987425332,0.219550115291051,0,0,0.205809224758569,0,0,0,0.232236671860439,0,0,0,0,0.474529061544512,0.329397909448022,0,0.397912944082302,0.19496408711912,0,0.216138049874694,0,0,0,0,0,0,0.140271639780637,0,0,0.156998727841375,0,0.296452627087149,0,0,0,0,0,0.50925170356284,0.575392274901621,0.486405680325106,1.37280706594041,5.75072826109418,1.11642284300551,0.312037673114561,0.757736633841335,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0.221464689648775,0,0,0.172684981865896,0.144649058581512,0,0,0,0.275936746304732,0.160550589987792,0.117211686592203,0.327869890753351,0,0.315508219416257,0.780877488593277,0.215423397732799,0,0,0,0.809621403349789,0.292255857911312,0.395287777946524,0.642642632843614,2.41298144854057,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,1.17335854031855,4.66030555900404,0.220528398054962,0,0,0.0603129249281559,0.238744688006273,0.164140899745061,0,0,0,0,0,0.753473828018764,0,0,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0.269728692769641,0.165306911450672,0,0,0,0,0.299033092087958,0.330916980914195,0.583353565032143,1.80823752868824,9.79945527846513,7.04143431874524,1.0416350787516,0.419437377702843,0,0,0,0,0.205421914329655,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269141569828427,0.335769232728157,0,1.12609485270709,0.183151624267265,0,0,1.12950368523413,0,0,0.171853182343688,0.685082519770642,0.755393897389701,0.675022500231806,0.45032120322422,1.81256963593682,1.55328093525546,0,0,0,0.243106717068294,0.209613162627982,0,0,0,0,0,0.25347929989024,0,0.187283014939765,0.128050304809739,0.0574354689556133,0,0,0,0,0.147198920134397,0.685738504770831,0.177475806159338,0,0.145346416632329,0.188218760830661,0.169229215783353,0,0.263069711437843,0,0,0,0.0985044823755635,0.818462086339379,0.154936841185966,0,0.249810577937946,0,0.429742108096597,0,0,0 | |||
|short_description=p@chr13:16118975..16118996,+ | |||
}} |
Revision as of 00:03, 13 September 2013
Short description: | p@chr13:16118975..16118996, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:16118975..16118996, + |
Coexpression cluster: | MCL_coexpression_mm9:1638 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 3.15e-12 | 6 |
muscle cell | 3.15e-12 | 6 |
myoblast | 3.15e-12 | 6 |
multi-potent skeletal muscle stem cell | 2.47e-11 | 9 |
mesodermal cell | 1.94e-10 | 7 |
duct epithelial cell | 2.04e-10 | 3 |
epithelial cell of tracheobronchial tree | 2.04e-10 | 3 |
branched duct epithelial cell | 2.04e-10 | 3 |
epithelial cell of lower respiratory tract | 2.04e-10 | 3 |
respiratory epithelial cell | 2.04e-10 | 3 |
tracheal epithelial cell | 2.04e-10 | 3 |
tracheoblast | 2.04e-10 | 3 |
smooth muscle cell | 9.29e-10 | 3 |
vascular associated smooth muscle cell | 9.29e-10 | 3 |
aortic smooth muscle cell | 9.29e-10 | 3 |
smooth muscle myoblast | 9.29e-10 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.