FFCP PHASE1:Mm9::chr13:28909482..28909485,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1112|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:28909482..28909485,-|id=chr13:28909482..28909485,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000065!2.11e-07!41;UBERON:0001004!6.09e-07!42|ontology_enrichment_uberon_v019_2=UBERON:0000065,1.61e-18,41;UBERON:0001004,5.06e-18,42;UBERON:0000153,3.97e-15,43;UBERON:0002370,1.68e-14,23;UBERON:0000974,1.68e-14,23;UBERON:0004807,1.68e-14,23;UBERON:0005058,1.68e-14,23;UBERON:0003351,1.68e-14,23;UBERON:0009113,1.68e-14,23;UBERON:0003295,1.68e-14,23;UBERON:0009722,1.68e-14,23;UBERON:0005562,1.68e-14,23;UBERON:0007690,1.68e-14,23;UBERON:0006562,7.67e-14,24;UBERON:0003408,7.67e-14,24;UBERON:0001557,7.67e-14,24;UBERON:0001042,7.67e-14,24;UBERON:0008814,7.67e-14,24;UBERON:0009145,7.67e-14,24;UBERON:0007811,4.94e-13,36;UBERON:0000072,3.75e-12,27;UBERON:0004177,3.20e-11,29;UBERON:0005057,3.20e-11,29;UBERON:0005911,4.98e-10,69;UBERON:0000077,4.62e-09,35;UBERON:0001048,1.15e-08,134;UBERON:0001041,2.58e-08,80;UBERON:0002048,2.85e-07,14;UBERON:0000117,2.85e-07,14;UBERON:0000171,2.85e-07,14;UBERON:0000170,2.85e-07,14;UBERON:0005597,2.85e-07,14;UBERON:0000118,2.85e-07,14;UBERON:0002390,9.63e-07,45;UBERON:0003061,9.63e-07,45|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0.297872853602656,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0.485510353031154,0.125896817975577,0.304130793658544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414758449233911,0.135005938331691,0,0,0,0,0.287536413054709,0,0,0,0,0.131886287730194,0.182975287204819,0,0,0.56276261003168,0,0,0,0,0.227178579999552,0.0755715601067855,0,0,0,0,0,0,0,0.170430322578058,0,0,0.281686839553361,0,0,0,0.432982082022428,0.253359865475099,0,0,0,0.148442139064825,0.173485326766136,0,0.230615497256059,0.150722640552623,0.23517741427141,0,0,0,0,0.323533699894818,0,0.969750506270444,0,0,0,0,0,0,0.127070227073065,0.149790639404823,0,0.376963056338593,0.173824320192276,0,0,0,0.712875546952214,0.622034853050465,0,0,0.520481771850815,0.459804208866946,0.540186389416048,1.05493372485001,0.680364991513279,1.15302348256365,0.562210347358373,0,0.431135985865684,1.70195472151037,0.175951124163949,0.657587197282725,1.66828349535359,0.696504333044333,0.61734640922383,0.796137067273973,0,0,0,0,0,0.720248245844059,0.710234206755631,0.196764231747404,0.154267112887378,0,0.268273401399619,0.350296027101508,0.329119699826961,1.14917224855367,0.0810688095458557,0.584799949701329,0,0.536825675041487,0,0.102904612379284,0,0,0.853153002140936,0.696710015581316,0.128867461322093,0.201683524623343,0.22237804384487,0.190225626112559,0,0,0.251335208800269,0,0,0,0,0,0,0.799739588268102,0,0.610953983535943,0.387904974335251,0.280543279561274,0.379419222745544,0,0,0.123397163921801,0,0.166845105716094,0,0,0,0,0,0,0.162135226775035,0,0,0.744281895337007,0,0,0,0,0,0.37898282354097,0.651859905768103,1.01847051465113,0.704070744865506,0.167506257441816,0.238043640886014,0.390267295715598,1.41871629695572,0.664394068946325,1.11618338060241,0.491589944147214,1.20879487306127,1.59113964439663,0,0,0.491764273019036,0,0,0.234423373184406,0,0.252470927204373,0,0,0.430846795465598,0.477937595905104,0.668396022247182,0.283076530788832,0.404810701674894,0.584511715822624,0,0,0.141940085208269,0.534196811001766,0.488660878060728,0.494910368917606,0,0.242780636154981,0,0.565815239267694,0.295301892880773,0,0.516856586336442,0,0,0.316036757935816,1.05418608574999,0,0.340439605753788,0.18006109403131,0.129358683782755,0.428674070063185,0.886701168211368,0.713475270408282,0.164549020602121,0,0,0,0,0.32977250588296,0.161464426695906,0.422190474497091,0.477489376012546,0.492422699235184,0,0,0.170870880797853,0.206386867963223,0.185194527369712,0.188368457004691,0,0,0.679913719975421,0.559805809294632,0.552799895217695,0,0.316335993581135,0.203319467126849,0.108005340821801,0.209088296014469,0.655087691238533,0.134864346384821,0.165306911450672,0.523511883968059,0,0,0,0.448549638131936,0.165458490457098,0.388902376688095,0.129159823477731,0.337912250981556,0.117357238645754,0.2604087696879,0.629156066554265,0.483168241652012,0,1.26404448251271,0.810900861160657,0.616265742988964,0.649604114888975,0.179026695667481,0.79472541912506,1.20195449519969,2.80610101631697,1.81739609906666,1.82896335972,3.2264379243789,2.33898913775406,3.94468550725351,3.97381467417334,0.453460767230423,0,0,0,0.386379188064381,0,0.549454872801795,0.643105137237198,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0.798049746802062,0.853668028770671,0,0,0.183843508450014,0.44449345560323,0.206035057238894,0.320919209591815,0.252697211763798,1.01391719956096,0.377252682772152,0.280924522409647,0.128050304809739,0.402048282689293,0,0.811190281613988,0.38581844092741,0.412085900803307,0.147198920134397,0.685738504770831,0.532427418478012,0.476872379894642,0.72673208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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1112 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:28909482..28909485,- | |||
|id=chr13:28909482..28909485,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000065!2.11e-07!41;UBERON:0001004!6.09e-07!42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000065,1.61e-18,41;UBERON:0001004,5.06e-18,42;UBERON:0000153,3.97e-15,43;UBERON:0002370,1.68e-14,23;UBERON:0000974,1.68e-14,23;UBERON:0004807,1.68e-14,23;UBERON:0005058,1.68e-14,23;UBERON:0003351,1.68e-14,23;UBERON:0009113,1.68e-14,23;UBERON:0003295,1.68e-14,23;UBERON:0009722,1.68e-14,23;UBERON:0005562,1.68e-14,23;UBERON:0007690,1.68e-14,23;UBERON:0006562,7.67e-14,24;UBERON:0003408,7.67e-14,24;UBERON:0001557,7.67e-14,24;UBERON:0001042,7.67e-14,24;UBERON:0008814,7.67e-14,24;UBERON:0009145,7.67e-14,24;UBERON:0007811,4.94e-13,36;UBERON:0000072,3.75e-12,27;UBERON:0004177,3.20e-11,29;UBERON:0005057,3.20e-11,29;UBERON:0005911,4.98e-10,69;UBERON:0000077,4.62e-09,35;UBERON:0001048,1.15e-08,134;UBERON:0001041,2.58e-08,80;UBERON:0002048,2.85e-07,14;UBERON:0000117,2.85e-07,14;UBERON:0000171,2.85e-07,14;UBERON:0000170,2.85e-07,14;UBERON:0005597,2.85e-07,14;UBERON:0000118,2.85e-07,14;UBERON:0002390,9.63e-07,45;UBERON:0003061,9.63e-07,45 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0.297872853602656,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0.485510353031154,0.125896817975577,0.304130793658544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414758449233911,0.135005938331691,0,0,0,0,0.287536413054709,0,0,0,0,0.131886287730194,0.182975287204819,0,0,0.56276261003168,0,0,0,0,0.227178579999552,0.0755715601067855,0,0,0,0,0,0,0,0.170430322578058,0,0,0.281686839553361,0,0,0,0.432982082022428,0.253359865475099,0,0,0,0.148442139064825,0.173485326766136,0,0.230615497256059,0.150722640552623,0.23517741427141,0,0,0,0,0.323533699894818,0,0.969750506270444,0,0,0,0,0,0,0.127070227073065,0.149790639404823,0,0.376963056338593,0.173824320192276,0,0,0,0.712875546952214,0.622034853050465,0,0,0.520481771850815,0.459804208866946,0.540186389416048,1.05493372485001,0.680364991513279,1.15302348256365,0.562210347358373,0,0.431135985865684,1.70195472151037,0.175951124163949,0.657587197282725,1.66828349535359,0.696504333044333,0.61734640922383,0.796137067273973,0,0,0,0,0,0.720248245844059,0.710234206755631,0.196764231747404,0.154267112887378,0,0.268273401399619,0.350296027101508,0.329119699826961,1.14917224855367,0.0810688095458557,0.584799949701329,0,0.536825675041487,0,0.102904612379284,0,0,0.853153002140936,0.696710015581316,0.128867461322093,0.201683524623343,0.22237804384487,0.190225626112559,0,0,0.251335208800269,0,0,0,0,0,0,0.799739588268102,0,0.610953983535943,0.387904974335251,0.280543279561274,0.379419222745544,0,0,0.123397163921801,0,0.166845105716094,0,0,0,0,0,0,0.162135226775035,0,0,0.744281895337007,0,0,0,0,0,0.37898282354097,0.651859905768103,1.01847051465113,0.704070744865506,0.167506257441816,0.238043640886014,0.390267295715598,1.41871629695572,0.664394068946325,1.11618338060241,0.491589944147214,1.20879487306127,1.59113964439663,0,0,0.491764273019036,0,0,0.234423373184406,0,0.252470927204373,0,0,0.430846795465598,0.477937595905104,0.668396022247182,0.283076530788832,0.404810701674894,0.584511715822624,0,0,0.141940085208269,0.534196811001766,0.488660878060728,0.494910368917606,0,0.242780636154981,0,0.565815239267694,0.295301892880773,0,0.516856586336442,0,0,0.316036757935816,1.05418608574999,0,0.340439605753788,0.18006109403131,0.129358683782755,0.428674070063185,0.886701168211368,0.713475270408282,0.164549020602121,0,0,0,0,0.32977250588296,0.161464426695906,0.422190474497091,0.477489376012546,0.492422699235184,0,0,0.170870880797853,0.206386867963223,0.185194527369712,0.188368457004691,0,0,0.679913719975421,0.559805809294632,0.552799895217695,0,0.316335993581135,0.203319467126849,0.108005340821801,0.209088296014469,0.655087691238533,0.134864346384821,0.165306911450672,0.523511883968059,0,0,0,0.448549638131936,0.165458490457098,0.388902376688095,0.129159823477731,0.337912250981556,0.117357238645754,0.2604087696879,0.629156066554265,0.483168241652012,0,1.26404448251271,0.810900861160657,0.616265742988964,0.649604114888975,0.179026695667481,0.79472541912506,1.20195449519969,2.80610101631697,1.81739609906666,1.82896335972,3.2264379243789,2.33898913775406,3.94468550725351,3.97381467417334,0.453460767230423,0,0,0,0.386379188064381,0,0.549454872801795,0.643105137237198,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0.798049746802062,0.853668028770671,0,0,0.183843508450014,0.44449345560323,0.206035057238894,0.320919209591815,0.252697211763798,1.01391719956096,0.377252682772152,0.280924522409647,0.128050304809739,0.402048282689293,0,0.811190281613988,0.38581844092741,0.412085900803307,0.147198920134397,0.685738504770831,0.532427418478012,0.476872379894642,0.726732083161643,0.282328141245992,0.338458431566706,0.182927972872773,0.263069711437843,0.271608227691724,0.561142271657738,0.830445126869219,0.591026894253381,0.409231043169689,0.154936841185966,0.578719832943424,0.499621155875892,0.467863216890817,0.644613162144895,0.956441660344217,0,0 | |||
|short_description=p@chr13:28909482..28909485,- | |||
}} |
Revision as of 00:17, 13 September 2013
Short description: | p@chr13:28909482..28909485, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:28909482..28909485, - |
Coexpression cluster: | MCL_coexpression_mm9:1112 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory tract | 1.61e-18 | 41 |
respiratory system | 5.06e-18 | 42 |
anterior region of body | 3.97e-15 | 43 |
thymus | 1.68e-14 | 23 |
neck | 1.68e-14 | 23 |
respiratory system epithelium | 1.68e-14 | 23 |
hemolymphoid system gland | 1.68e-14 | 23 |
pharyngeal epithelium | 1.68e-14 | 23 |
thymic region | 1.68e-14 | 23 |
pharyngeal gland | 1.68e-14 | 23 |
entire pharyngeal arch endoderm | 1.68e-14 | 23 |
thymus primordium | 1.68e-14 | 23 |
early pharyngeal endoderm | 1.68e-14 | 23 |
pharynx | 7.67e-14 | 24 |
gland of gut | 7.67e-14 | 24 |
upper respiratory tract | 7.67e-14 | 24 |
chordate pharynx | 7.67e-14 | 24 |
pharyngeal arch system | 7.67e-14 | 24 |
pharyngeal region of foregut | 7.67e-14 | 24 |
craniocervical region | 4.94e-13 | 36 |
segment of respiratory tract | 3.75e-12 | 27 |
hemopoietic organ | 3.20e-11 | 29 |
immune organ | 3.20e-11 | 29 |
endo-epithelium | 4.98e-10 | 69 |
mixed endoderm/mesoderm-derived structure | 4.62e-09 | 35 |
primordium | 1.15e-08 | 134 |
foregut | 2.58e-08 | 80 |
lung | 2.85e-07 | 14 |
respiratory tube | 2.85e-07 | 14 |
respiration organ | 2.85e-07 | 14 |
pair of lungs | 2.85e-07 | 14 |
lung primordium | 2.85e-07 | 14 |
lung bud | 2.85e-07 | 14 |
hematopoietic system | 9.63e-07 | 45 |
blood island | 9.63e-07 | 45 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.