FFCP PHASE1:Hg19::chr3:52029900..52029941,-: Difference between revisions
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{{FFCP | 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8,324.587766594327,92.7350563835585,192.074627794665,215.686872578428,54.4388108834119,269.797096923373,160.77887561043,40.0148072350943,38.2580756079079,37.0350553012591,63.5860729146341,255.096556576379,43.4307545475288,46.3435102963413,39.9754376725632,214.747208080244,232.872233888439,137.754877489781,495.605107784951,98.3965806305291,153.950263511402,247.252864090529,299.036265516647,142.403778504685,500.168967189179,364.312212023659,269.404804304109,117.249876370117,32.0803526937375,37.4917487334647,25.2157891731445,40.6495343342943,218.789923607288,292.221389734878,176.651179506589,265.037965249948,135.428173297971,28.3921973015492,28.2478326663812,54.6269043812968,35.0599774680998,87.5492393505245,193.823567068821,83.0001965677105,33.0332902267402,44.7254860227374,166.062346441975,131.809211242102,195.604787383481,61.7464268369887,93.050358220178,126.92906215082,106.45230247078,90.7728206985395,71.8339268975396,284.108473895442,228.18191799763,145.867090461864,201.229552547293,583.106285954786,428.503377505814,171.432396129895,198.334812416148,203.412709255842,256.662775134583,92.2983769416225,195.428158868075,187.364656941249,137.59760721275,172.816642127589,131.325012577195,115.456274958209,146.966346041652,353.365381199202,513.797793082822,184.570177362473,205.398848919729,175.87248524265,351.527788338493,178.228917457479,264.297002256012,72.16023922487,124.790613660547,234.73296798125,110.524564644958,144.882658156558,63.632667717439,50.4512760485409,47.2303776520067,92.984260068348,133.902566374,158.644853549993,137.037469831825,252.351418710446,103.561284391281,242.43877686868,100.943639294974,134.381895437359,202.758343264807,61.6360207551241,121.641874450945,55.6850304663591,161.88610611628,169.288588964928,184.509529010709,296.716753581371,262.60432320914,294.850934839579,173.295197134421,412.150223790205,216.012341393517,223.393750802009,261.349094277099,186.275701694235,152.997191702625,106.649723802159,43.1168108518565,45.6139511750958,197.241433258407,182.595418932689,147.779425704782,120.238721591077,527.356149716625,154.917183249053,103.079766368692,239.488422686657,219.71377929675,167.36985174125,144.376799455458,171.985404334289,99.8004073170547,311.643849962929,69.5060216232984,424.873205964156,103.24201465752,129.698172278021,187.17224202524,150.461030965926,209.324745334667,597.219101160923|short_description=p1@RPL29}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=6159 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10331 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000486565_5end | |||
|description=CAGE_peak_1_at_RPL29_5end | |||
|id=chr3:52029900..52029941,- | |||
|ontology_enrichment_celltype=CL:0000144!2.20e-25!625;CL:0000012!1.19e-23!682;CL:0002371!4.59e-23!591;CL:0000548!3.50e-22!679;CL:0000004!3.50e-22!679;CL:0000255!3.50e-22!679;CL:0000003!4.47e-21!722;CL:0000183!1.12e-11!59;CL:0000222!5.39e-10!119;CL:0002321!9.27e-10!248;CL:0000220!1.12e-09!246;CL:0000187!1.68e-09!54;CL:0000680!3.74e-09!57;CL:0000056!3.74e-09!57;CL:0000355!3.74e-09!57;CL:0000393!1.03e-08!60;CL:0000211!1.03e-08!60;CL:0000192!7.84e-08!42;CL:0000514!7.84e-08!42;CL:0000063!2.24e-07!578 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.02e-10,121;CL:0002321,3.97e-10,250;CL:0000187,1.23e-09,55;CL:0000680,2.73e-09,58;CL:0000056,2.73e-09,58;CL:0000355,2.73e-09,58;CL:0000393,7.55e-09,61;CL:0000211,7.55e-09,61;CL:0000192,5.77e-08,43;CL:0000514,5.77e-08,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000486!3.31e-10!82;UBERON:0004290!6.61e-10!70;UBERON:0001134!5.35e-09!61;UBERON:0002036!5.35e-09!61;UBERON:0003082!5.35e-09!61;UBERON:0000914!2.30e-08!83;UBERON:0002329!2.30e-08!83;UBERON:0003077!2.30e-08!83;UBERON:0003059!2.30e-08!83;UBERON:0007282!2.30e-08!83;UBERON:0009618!2.30e-08!83;UBERON:0007285!2.30e-08!83;UBERON:0002385!3.73e-08!63;UBERON:0001015!3.73e-08!63;UBERON:0000383!3.73e-08!63;UBERON:0002049!1.32e-07!79;UBERON:0007798!1.32e-07!79;UBERON:0004535!6.82e-07!110 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,1.41e-12,78;UBERON:0000486,2.40e-10,83;UBERON:0002329,4.80e-10,71;UBERON:0003059,4.80e-10,71;UBERON:0007282,4.80e-10,71;UBERON:0004290,4.80e-10,71;UBERON:0009618,4.80e-10,71;UBERON:0007524,1.68e-09,73;UBERON:0003077,2.01e-09,72;UBERON:0007285,2.01e-09,72;UBERON:0001134,3.90e-09,62;UBERON:0002036,3.90e-09,62;UBERON:0003082,3.90e-09,62;UBERON:0002385,2.73e-08,64;UBERON:0001015,2.73e-08,64;UBERON:0000383,2.73e-08,64;UBERON:0002049,8.24e-08,78;UBERON:0007798,8.24e-08,78;UBERON:0000490,1.06e-07,148;UBERON:0004535,4.81e-07,109 | |||
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| |||
|short_description=p1@RPL29 | |||
}} |
Revision as of 00:46, 13 September 2013
Short description: | p1@RPL29 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_RPL29_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000486565_5end |
EntrezGene: | RPL29 |
HGNC: | 10331 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.02e-10 | 121 |
embryonic cell | 3.97e-10 | 250 |
muscle cell | 1.23e-09 | 55 |
muscle precursor cell | 2.73e-09 | 58 |
myoblast | 2.73e-09 | 58 |
multi-potent skeletal muscle stem cell | 2.73e-09 | 58 |
electrically responsive cell | 7.55e-09 | 61 |
electrically active cell | 7.55e-09 | 61 |
smooth muscle cell | 5.77e-08 | 43 |
smooth muscle myoblast | 5.77e-08 | 43 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 1.41e-12 | 78 |
multilaminar epithelium | 2.40e-10 | 83 |
somite | 4.80e-10 | 71 |
presomitic mesoderm | 4.80e-10 | 71 |
presumptive segmental plate | 4.80e-10 | 71 |
dermomyotome | 4.80e-10 | 71 |
trunk paraxial mesoderm | 4.80e-10 | 71 |
dense mesenchyme tissue | 1.68e-09 | 73 |
paraxial mesoderm | 2.01e-09 | 72 |
presumptive paraxial mesoderm | 2.01e-09 | 72 |
skeletal muscle tissue | 3.90e-09 | 62 |
striated muscle tissue | 3.90e-09 | 62 |
myotome | 3.90e-09 | 62 |
muscle tissue | 2.73e-08 | 64 |
musculature | 2.73e-08 | 64 |
musculature of body | 2.73e-08 | 64 |
vasculature | 8.24e-08 | 78 |
vascular system | 8.24e-08 | 78 |
unilaminar epithelium | 1.06e-07 | 148 |
cardiovascular system | 4.81e-07 | 109 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.