FFCP PHASE1:Mm9::chr13:56540276..56540278,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=8|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:56540276..56540278,+|id=chr13:56540276..56540278,+|ontology_enrichment_celltype=CL:0000181!1.88e-12!5;CL:0000417!1.88e-12!5;CL:0000668!1.88e-12!5;CL:0000412!1.88e-12!5;CL:0000182!1.88e-12!5;CL:0000066!9.22e-09!25;CL:0000223!1.09e-07!20|ontology_enrichment_celltype_v019_2=CL:0000182,7.88e-37,5;CL:0000223,2.86e-09,20;CL:0000213,2.89e-08,1;CL:0002078,2.89e-08,1;CL:0000115,2.89e-08,1;CL:0002262,2.89e-08,1;CL:1000398,2.89e-08,1;CL:0000066,2.08e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!8.18e-24!22;UBERON:0007499!8.18e-24!22;UBERON:0006925!8.18e-24!22;UBERON:0009497!8.18e-24!22;UBERON:0000015!8.18e-24!22;UBERON:0002423!8.18e-24!22;UBERON:0006235!8.18e-24!22;UBERON:0008835!8.18e-24!22;UBERON:0003894!8.18e-24!22;UBERON:0004161!8.18e-24!22;UBERON:0008836!8.18e-24!22;UBERON:0009854!1.35e-22!23;UBERON:0009856!1.35e-22!23;UBERON:0002365!1.88e-20!25;UBERON:0002330!1.88e-20!25;UBERON:0005172!5.86e-14!49;UBERON:0005173!5.86e-14!49;UBERON:0002417!5.86e-14!49;UBERON:0000916!5.86e-14!49;UBERON:0005256!5.09e-13!47;UBERON:0009569!2.76e-11!66;UBERON:0003914!3.20e-10!47;UBERON:0005177!1.71e-09!85;UBERON:0003929!2.06e-09!55;UBERON:0000466!2.18e-09!79;UBERON:0002100!2.75e-08!98;UBERON:0005057!5.52e-08!51;UBERON:0001007!3.55e-07!128;UBERON:0001555!3.55e-07!128;UBERON:0007026!3.55e-07!128;UBERON:0000490!3.99e-07!66;UBERON:0004119!5.76e-07!130;UBERON:0000925!5.76e-07!130;UBERON:0006595!5.76e-07!130|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.68e-32,22;UBERON:0007499,1.68e-32,22;UBERON:0006925,1.68e-32,22;UBERON:0009497,1.68e-32,22;UBERON:0000015,1.68e-32,22;UBERON:0002423,1.68e-32,22;UBERON:0006235,1.68e-32,22;UBERON:0008835,1.68e-32,22;UBERON:0003894,1.68e-32,22;UBERON:0004161,1.68e-32,22;UBERON:0008836,1.68e-32,22;UBERON:0009854,4.63e-31,23;UBERON:0009856,4.63e-31,23;UBERON:0002365,1.59e-28,25;UBERON:0002330,1.59e-28,25;UBERON:0005256,1.62e-15,45;UBERON:0003914,8.01e-15,47;UBERON:0005172,3.48e-14,49;UBERON:0005173,3.48e-14,49;UBERON:0002417,3.48e-14,49;UBERON:0000916,3.48e-14,49;UBERON:0003929,1.52e-12,55;UBERON:0002368,2.00e-11,60;UBERON:0003104,3.18e-11,61;UBERON:0009142,3.18e-11,61;UBERON:0000331,9.09e-11,3;UBERON:0002116,9.09e-11,3;UBERON:0001204,9.09e-11,3;UBERON:0001168,9.09e-11,3;UBERON:0002530,1.77e-10,65;UBERON:0000490,2.63e-10,66;UBERON:0009569,2.63e-10,66;UBERON:0005911,8.11e-10,69;UBERON:0000949,2.27e-09,72;UBERON:0005177,1.87e-08,79;UBERON:0004921,2.44e-08,114;UBERON:0001041,2.45e-08,80;UBERON:0002108,2.67e-08,4;UBERON:0002394,2.89e-08,1;UBERON:0001281,2.89e-08,1;UBERON:0000353,2.89e-08,1;UBERON:0003497,2.89e-08,1;UBERON:0003909,2.89e-08,1;UBERON:0003928,2.89e-08,1;UBERON:0003835,2.89e-08,1;UBERON:0003513,2.89e-08,1;UBERON:0001280,2.89e-08,1;UBERON:0004647,2.89e-08,1;UBERON:0002294,2.89e-08,1;UBERON:0001173,2.89e-08,1;UBERON:0004912,2.89e-08,1;UBERON:0005171,2.89e-08,1;UBERON:0001007,3.55e-08,116;UBERON:0001555,3.55e-08,116;UBERON:0007026,3.55e-08,116;UBERON:0004119,5.10e-08,118;UBERON:0000925,5.10e-08,118;UBERON:0006595,5.10e-08,118;UBERON:0002100,2.67e-07,90|phase1_expression=0,0.697950815278722,0,0.60492842261366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0.319984845586813,0.22940928106717,0.57423196411502,0.430761996159075,0,2.66032787238923,0,1.77384408524244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15945795480671,0,1.3599426674155,4.85732872474035,7.14754059192436,3.13618820968135,0.140444420131752,0,0,0,0,0,0,0,0.216491041011214,0.253359865475099,0,0.91347103775248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0.941992367048249,0.987177311374404,1.1858105083486,0,0,0,0,0,0.25462585178142,0.287696137450811,0.486405680325106,0.274561413188081,1.43768206527355,0.744281895337007,0.936113019343682,2.27320990152401,2.33216637578486,6.27176577772377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0,0,0.115884325944855,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr13:56540276..56540278,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=8 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:56540276..56540278,+ | |||
|id=chr13:56540276..56540278,+ | |||
|ontology_enrichment_celltype=CL:0000181!1.88e-12!5;CL:0000417!1.88e-12!5;CL:0000668!1.88e-12!5;CL:0000412!1.88e-12!5;CL:0000182!1.88e-12!5;CL:0000066!9.22e-09!25;CL:0000223!1.09e-07!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,7.88e-37,5;CL:0000223,2.86e-09,20;CL:0000213,2.89e-08,1;CL:0002078,2.89e-08,1;CL:0000115,2.89e-08,1;CL:0002262,2.89e-08,1;CL:1000398,2.89e-08,1;CL:0000066,2.08e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!8.18e-24!22;UBERON:0007499!8.18e-24!22;UBERON:0006925!8.18e-24!22;UBERON:0009497!8.18e-24!22;UBERON:0000015!8.18e-24!22;UBERON:0002423!8.18e-24!22;UBERON:0006235!8.18e-24!22;UBERON:0008835!8.18e-24!22;UBERON:0003894!8.18e-24!22;UBERON:0004161!8.18e-24!22;UBERON:0008836!8.18e-24!22;UBERON:0009854!1.35e-22!23;UBERON:0009856!1.35e-22!23;UBERON:0002365!1.88e-20!25;UBERON:0002330!1.88e-20!25;UBERON:0005172!5.86e-14!49;UBERON:0005173!5.86e-14!49;UBERON:0002417!5.86e-14!49;UBERON:0000916!5.86e-14!49;UBERON:0005256!5.09e-13!47;UBERON:0009569!2.76e-11!66;UBERON:0003914!3.20e-10!47;UBERON:0005177!1.71e-09!85;UBERON:0003929!2.06e-09!55;UBERON:0000466!2.18e-09!79;UBERON:0002100!2.75e-08!98;UBERON:0005057!5.52e-08!51;UBERON:0001007!3.55e-07!128;UBERON:0001555!3.55e-07!128;UBERON:0007026!3.55e-07!128;UBERON:0000490!3.99e-07!66;UBERON:0004119!5.76e-07!130;UBERON:0000925!5.76e-07!130;UBERON:0006595!5.76e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.68e-32,22;UBERON:0007499,1.68e-32,22;UBERON:0006925,1.68e-32,22;UBERON:0009497,1.68e-32,22;UBERON:0000015,1.68e-32,22;UBERON:0002423,1.68e-32,22;UBERON:0006235,1.68e-32,22;UBERON:0008835,1.68e-32,22;UBERON:0003894,1.68e-32,22;UBERON:0004161,1.68e-32,22;UBERON:0008836,1.68e-32,22;UBERON:0009854,4.63e-31,23;UBERON:0009856,4.63e-31,23;UBERON:0002365,1.59e-28,25;UBERON:0002330,1.59e-28,25;UBERON:0005256,1.62e-15,45;UBERON:0003914,8.01e-15,47;UBERON:0005172,3.48e-14,49;UBERON:0005173,3.48e-14,49;UBERON:0002417,3.48e-14,49;UBERON:0000916,3.48e-14,49;UBERON:0003929,1.52e-12,55;UBERON:0002368,2.00e-11,60;UBERON:0003104,3.18e-11,61;UBERON:0009142,3.18e-11,61;UBERON:0000331,9.09e-11,3;UBERON:0002116,9.09e-11,3;UBERON:0001204,9.09e-11,3;UBERON:0001168,9.09e-11,3;UBERON:0002530,1.77e-10,65;UBERON:0000490,2.63e-10,66;UBERON:0009569,2.63e-10,66;UBERON:0005911,8.11e-10,69;UBERON:0000949,2.27e-09,72;UBERON:0005177,1.87e-08,79;UBERON:0004921,2.44e-08,114;UBERON:0001041,2.45e-08,80;UBERON:0002108,2.67e-08,4;UBERON:0002394,2.89e-08,1;UBERON:0001281,2.89e-08,1;UBERON:0000353,2.89e-08,1;UBERON:0003497,2.89e-08,1;UBERON:0003909,2.89e-08,1;UBERON:0003928,2.89e-08,1;UBERON:0003835,2.89e-08,1;UBERON:0003513,2.89e-08,1;UBERON:0001280,2.89e-08,1;UBERON:0004647,2.89e-08,1;UBERON:0002294,2.89e-08,1;UBERON:0001173,2.89e-08,1;UBERON:0004912,2.89e-08,1;UBERON:0005171,2.89e-08,1;UBERON:0001007,3.55e-08,116;UBERON:0001555,3.55e-08,116;UBERON:0007026,3.55e-08,116;UBERON:0004119,5.10e-08,118;UBERON:0000925,5.10e-08,118;UBERON:0006595,5.10e-08,118;UBERON:0002100,2.67e-07,90 | |||
|phase1_expression=0,0.697950815278722,0,0.60492842261366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0.319984845586813,0.22940928106717,0.57423196411502,0.430761996159075,0,2.66032787238923,0,1.77384408524244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15945795480671,0,1.3599426674155,4.85732872474035,7.14754059192436,3.13618820968135,0.140444420131752,0,0,0,0,0,0,0,0.216491041011214,0.253359865475099,0,0.91347103775248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0.941992367048249,0.987177311374404,1.1858105083486,0,0,0,0,0,0.25462585178142,0.287696137450811,0.486405680325106,0.274561413188081,1.43768206527355,0.744281895337007,0.936113019343682,2.27320990152401,2.33216637578486,6.27176577772377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0,0,0.115884325944855,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr13:56540276..56540278,+ | |||
}} |
Revision as of 00:53, 13 September 2013
Short description: | p@chr13:56540276..56540278, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:56540276..56540278, + |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 7.88e-37 | 5 |
endodermal cell | 2.86e-09 | 20 |
lining cell | 2.89e-08 | 1 |
meso-epithelial cell | 2.89e-08 | 1 |
endothelial cell | 2.89e-08 | 1 |
endothelial cell of sinusoid | 2.89e-08 | 1 |
endothelial cell of hepatic sinusoid | 2.89e-08 | 1 |
epithelial cell | 2.08e-07 | 25 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.