FFCP PHASE1:Hg19::chr3:72128318..72128322,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr3:72128318..72128322,+|id=chr3:72128318..72128322,+|ontology_enrichment_celltype=CL:0000037!2.22e-29!172;CL:0000566!2.22e-29!172;CL:0002032!1.57e-26!165;CL:0000837!1.57e-26!165;CL:0000988!3.10e-26!182;CL:0000945!1.04e-19!24;CL:0000826!1.04e-19!24;CL:0000738!3.41e-16!140;CL:0000763!2.16e-13!112;CL:0000049!2.16e-13!112;CL:0000542!2.17e-13!53;CL:0000051!2.17e-13!53;CL:0000838!1.23e-12!52;CL:0002031!1.76e-11!124;CL:0000236!2.64e-10!14;CL:0002087!8.18e-10!119;CL:0000219!4.31e-09!390;CL:0000451!1.12e-07!10|ontology_enrichment_celltype_v019=CL:0000945;1.30e-50;24!CL:0000236;1.86e-20;13!CL:0000542;3.11e-20;53!CL:0001014;1.01e-07;2!CL:0001016;1.01e-07;2!CL:0000453;9.12e-07;5|ontology_enrichment_celltype_v019_2=CL:0000945,5.78e-51,24;CL:0000826,5.78e-51,24;CL:0000542,8.40e-34,53;CL:0000051,8.40e-34,53;CL:0000838,1.07e-31,52;CL:0000037,9.37e-30,168;CL:0002032,7.06e-28,161;CL:0000837,7.06e-28,161;CL:0000988,9.74e-28,177;CL:0000236,7.01e-24,14;CL:0000738,2.09e-20,136;CL:0002031,8.27e-18,120;CL:0002087,5.27e-16,115;CL:0000817,6.39e-12,3;CL:0000134,2.01e-10,354;CL:0002320,5.03e-10,361;CL:0000034,6.29e-09,441;CL:0000219,1.26e-08,386;CL:0000785,1.61e-08,2;CL:0000955,1.61e-08,2;CL:0000818,1.61e-08,2;CL:0000954,1.61e-08,2;CL:0000816,1.61e-08,2;CL:0001014,1.12e-07,2;CL:0001016,1.12e-07,2;CL:0000048,1.65e-07,427;CL:0000723,2.89e-07,433;CL:0000453,9.23e-07,5|ontology_enrichment_development_v019=CL:0000051;3.11e-20;53!CL:0000954;2.46e-08;2|ontology_enrichment_disease=DOID:2531!7.35e-24!51;DOID:0060083!7.35e-24!51;DOID:1240!4.46e-20!39;DOID:8692!6.87e-16!31;DOID:0060058!1.10e-08!10;DOID:0050686!1.84e-08!137|ontology_enrichment_disease_v019=DOID:0060058;6.13e-23;10!DOID:2531;4.25e-16;51!DOID:0060083;4.25e-16;51!DOID:1240;4.22e-12;39!DOID:8692;6.74e-08;31|ontology_enrichment_disease_v019_2=DOID:2531,1.61e-26,51;DOID:0060083,1.61e-26,51;DOID:0060058,4.00e-23,10;DOID:1240,5.94e-15,39;DOID:8692,6.30e-08,31;DOID:0050686,2.11e-07,137|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.75e-09,371|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738726348460727,0,0.313454721478088,0.286235987131057,0.136874425072884,0,11.3855974564447,9.60576896564365,9.68142610158255,0,0.383829398097213,0.464448369948228,0,0,0,23.627496176992,54.308646810195,40.5168606282089,1.66198622559563,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,1.27867425159808,0,0,0,0,0,0,0,0,0,0,0,0,0.845021145247767,1.4882300997553,0.838634582033504,0.112328631146495,0.150176892841506,0.32145117339416,0.570025487482497,0.39783335439818,0,8.79981222306614,0.546138611262131,0,1.70692089026603,6.80673177961221,1.14950487990897,1.98313461835459,4.77026877267682,0,0,1.14681968437569,7.93027971474155,1.68152568894461,14.2227405778542,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0.132957960518865,0.953962497221368,2.85997455390064,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397589304964456,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0.290633938513962,0,0,0.088048434013226,1.03664057770386,0.432359860250884,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0.394061520403854,0,0,1.01637849688985,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0.438519753291869,0,0,0,0,0,0.0915694648183434,0.577566499444116,0,0,0,0.290012154876366,0,0,0.275673144969061,0.107420244868274,0,0,0.356128142586949,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476463550915578,0.822724546172388,0,0,0.79312517629427,0,0,0,1.11481905075431,6.63638379691646,0.213425530045242,6.21762463642407,7.98317485731266,0.766021480529467,0,0,5.05434920604226,0.228234679033192,0.313359791546046,15.038068625404,0.338583555603207,0.1605880751037,0,0,0,0,0.223676107892416,0.166849141711909,0.586164286206121,0,1.23087398947712,0.270455678475983,1.33228787199128,1.4098700508785,0,0,0.121360521749513,2.78608460693696,0,0,0,0,0,0,0,0,0,1.39473591775749,0.552567831062295,0,0,12.0623109351848,0,0,0,0.511572370226872,0.0986434056369336,0,0,0,0,0,0,1.31189999994294,0,0.1137934482855,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0.230850775511391,0.22788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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr3:72128318..72128322,+ | |||
|id=chr3:72128318..72128322,+ | |||
|ontology_enrichment_celltype=CL:0000037!2.22e-29!172;CL:0000566!2.22e-29!172;CL:0002032!1.57e-26!165;CL:0000837!1.57e-26!165;CL:0000988!3.10e-26!182;CL:0000945!1.04e-19!24;CL:0000826!1.04e-19!24;CL:0000738!3.41e-16!140;CL:0000763!2.16e-13!112;CL:0000049!2.16e-13!112;CL:0000542!2.17e-13!53;CL:0000051!2.17e-13!53;CL:0000838!1.23e-12!52;CL:0002031!1.76e-11!124;CL:0000236!2.64e-10!14;CL:0002087!8.18e-10!119;CL:0000219!4.31e-09!390;CL:0000451!1.12e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.30e-50;24!CL:0000236;1.86e-20;13!CL:0000542;3.11e-20;53!CL:0001014;1.01e-07;2!CL:0001016;1.01e-07;2!CL:0000453;9.12e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,5.78e-51,24;CL:0000826,5.78e-51,24;CL:0000542,8.40e-34,53;CL:0000051,8.40e-34,53;CL:0000838,1.07e-31,52;CL:0000037,9.37e-30,168;CL:0002032,7.06e-28,161;CL:0000837,7.06e-28,161;CL:0000988,9.74e-28,177;CL:0000236,7.01e-24,14;CL:0000738,2.09e-20,136;CL:0002031,8.27e-18,120;CL:0002087,5.27e-16,115;CL:0000817,6.39e-12,3;CL:0000134,2.01e-10,354;CL:0002320,5.03e-10,361;CL:0000034,6.29e-09,441;CL:0000219,1.26e-08,386;CL:0000785,1.61e-08,2;CL:0000955,1.61e-08,2;CL:0000818,1.61e-08,2;CL:0000954,1.61e-08,2;CL:0000816,1.61e-08,2;CL:0001014,1.12e-07,2;CL:0001016,1.12e-07,2;CL:0000048,1.65e-07,427;CL:0000723,2.89e-07,433;CL:0000453,9.23e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000051;3.11e-20;53!CL:0000954;2.46e-08;2 | |||
|ontology_enrichment_disease=DOID:2531!7.35e-24!51;DOID:0060083!7.35e-24!51;DOID:1240!4.46e-20!39;DOID:8692!6.87e-16!31;DOID:0060058!1.10e-08!10;DOID:0050686!1.84e-08!137 | |||
|ontology_enrichment_disease_v019=DOID:0060058;6.13e-23;10!DOID:2531;4.25e-16;51!DOID:0060083;4.25e-16;51!DOID:1240;4.22e-12;39!DOID:8692;6.74e-08;31 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.61e-26,51;DOID:0060083,1.61e-26,51;DOID:0060058,4.00e-23,10;DOID:1240,5.94e-15,39;DOID:8692,6.30e-08,31;DOID:0050686,2.11e-07,137 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.75e-09,371 | |||
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|short_description=p@chr3:72128318..72128322,+ | |||
}} |
Revision as of 01:21, 13 September 2013
Short description: | p@chr3:72128318..72128322, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:72128318..72128322, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 5.78e-51 | 24 |
pro-B cell | 5.78e-51 | 24 |
lymphocyte | 8.40e-34 | 53 |
common lymphoid progenitor | 8.40e-34 | 53 |
lymphoid lineage restricted progenitor cell | 1.07e-31 | 52 |
hematopoietic stem cell | 9.37e-30 | 168 |
hematopoietic oligopotent progenitor cell | 7.06e-28 | 161 |
hematopoietic multipotent progenitor cell | 7.06e-28 | 161 |
hematopoietic cell | 9.74e-28 | 177 |
B cell | 7.01e-24 | 14 |
leukocyte | 2.09e-20 | 136 |
hematopoietic lineage restricted progenitor cell | 8.27e-18 | 120 |
nongranular leukocyte | 5.27e-16 | 115 |
precursor B cell | 6.39e-12 | 3 |
mesenchymal cell | 2.01e-10 | 354 |
connective tissue cell | 5.03e-10 | 361 |
stem cell | 6.29e-09 | 441 |
motile cell | 1.26e-08 | 386 |
mature B cell | 1.61e-08 | 2 |
pre-B-II cell | 1.61e-08 | 2 |
transitional stage B cell | 1.61e-08 | 2 |
small pre-B-II cell | 1.61e-08 | 2 |
immature B cell | 1.61e-08 | 2 |
CD1a-positive Langerhans cell | 1.12e-07 | 2 |
immature CD1a-positive Langerhans cell | 1.12e-07 | 2 |
multi fate stem cell | 1.65e-07 | 427 |
somatic stem cell | 2.89e-07 | 433 |
Langerhans cell | 9.23e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.75e-09 | 371 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.61e-26 | 51 |
immune system cancer | 1.61e-26 | 51 |
lymphoma | 4.00e-23 | 10 |
leukemia | 5.94e-15 | 39 |
myeloid leukemia | 6.30e-08 | 31 |
organ system cancer | 2.11e-07 | 137 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.