FFCP PHASE1:Mm9::chr15:11835911..11835937,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=18162|HGNC=|MCL_coexpression_id=2962|UniProt=G3X9E5,Q7TMG7,P70180|association_with_transcript=-482bp_to_ENSMUST00000066529,NM_001039181,NM_008728,uc007vhe.1,uc007vhf.1_5end|description=CAGE_peak_2_at_Npr3_5end|id=chr15:11835911..11835937,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004535!9.52e-12!23;UBERON:0001009!9.52e-12!23;UBERON:0007100!6.78e-10!18;UBERON:0000948!6.78e-10!18;UBERON:0005498!6.78e-10!18;UBERON:0004140!6.78e-10!18;UBERON:0009881!6.78e-10!18;UBERON:0004141!6.78e-10!18;UBERON:0003084!6.78e-10!18;UBERON:0007005!6.78e-10!18;UBERON:0004139!6.78e-10!18;UBERON:0004291!6.78e-10!18;UBERON:0002048!7.89e-09!14;UBERON:0000117!7.89e-09!14;UBERON:0000171!7.89e-09!14;UBERON:0000170!7.89e-09!14;UBERON:0005597!7.89e-09!14;UBERON:0000118!7.89e-09!14;UBERON:0003103!3.33e-08!43;UBERON:0004872!4.00e-08!33;UBERON:0005153!8.87e-08!17;UBERON:0005157!2.39e-07!27;UBERON:0005178!2.84e-07!17;UBERON:0005181!2.84e-07!17;UBERON:0002224!2.84e-07!17;UBERON:0000915!2.84e-07!17;UBERON:0008947!2.84e-07!17;UBERON:0003258!2.84e-07!17;UBERON:0002100!4.11e-07!98;UBERON:0003914!5.22e-07!47|ontology_enrichment_uberon_v019_2=UBERON:0004535,3.01e-12,23;UBERON:0001009,3.01e-12,23;UBERON:0007100,1.06e-10,18;UBERON:0000948,1.06e-10,18;UBERON:0005498,1.06e-10,18;UBERON:0004140,1.06e-10,18;UBERON:0009881,1.06e-10,18;UBERON:0004141,1.06e-10,18;UBERON:0003084,1.06e-10,18;UBERON:0007005,1.06e-10,18;UBERON:0004139,1.06e-10,18;UBERON:0004291,1.06e-10,18;UBERON:0002048,1.57e-09,14;UBERON:0000117,1.57e-09,14;UBERON:0000171,1.57e-09,14;UBERON:0000170,1.57e-09,14;UBERON:0005597,1.57e-09,14;UBERON:0000118,1.57e-09,14;UBERON:0004872,2.41e-08,33;UBERON:0005153,9.35e-08,17;UBERON:0003103,2.58e-07,43;UBERON:0005178,3.56e-07,17;UBERON:0005181,3.56e-07,17;UBERON:0002224,3.56e-07,17;UBERON:0000915,3.56e-07,17;UBERON:0008947,3.56e-07,17;UBERON:0003258,3.56e-07,17|phase1_expression=4.16387002472464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.40173160604279,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.1291417884831,16.0175551326833,10.8292583775392,7.82391344348039,0,1.31811709640683,6.02732687130279,0.979904951377538,0,0,0,0,2.05807548828758,8.30946975822394,12.8918023069361,0,1.05798195854407,0,1.35537812827653,0.889294796111139,0.449949858640699,0,0,2.09720077362883,0.384218305321555,0.207379224616955,0.270011876663381,0.630974884054146,1.14260393761521,1.98781686856452,0.122490799214954,0.0958454710182364,0,0,0.383062014255563,0.307213066512487,0.263772575460388,0.0914876436024097,0,0.558365998002762,0,2.13917546887534,2.06240009831567,2.42031857358475,1.1183966749518,0.302904773332736,0.302286240427142,0.869593466105033,0.860423876981386,0,0,0.649776417447669,0,0.842666520790511,1.70430322578058,2.59786004602869,3.18005617059306,10.8449433228044,46.1975318691544,48.4129955442627,21.3320010945999,0.865964164044856,0.506719730950197,1.51657333504435,1.1418387971906,0,3.11728492036132,2.77576522825817,3.95805121805784,3.68984795609694,3.01445281105245,2.11659672844269,1.38233250462643,7.91023896749996,4.04878199375753,0.884610551949874,0.808834249737046,0.220841518460394,0,3.72783522436244,0.585561594023094,0.209446706813455,0,0,0,0,0.149790639404823,0,0.125654352112864,0.521472960576829,0,0,0.162241263067758,3.66621709861139,0.995255764880744,0.758168275301024,0.631325567659422,2.99277018814219,1.83921683546778,2.52086981727489,1.80845781402858,1.29269348387523,0.2562274405697,1.59292931751539,2.32833033665114,0.215567992932842,1.89106080167819,1.93546236580344,2.84954452155847,4.44875598760957,0.696504333044333,1.85203922767149,3.98068533636986,0,0,0,8.69928244649108,10.3191466391682,9.7233513188948,6.39210786080068,10.0349758191176,7.71335564436891,8.37122201101468,6.70683503499048,9.34122738937356,6.08871444679878,2.62667942526552,3.89130285820108,4.23979963533464,3.29325172936576,4.02619256281115,1.89260953707715,1.13195073617213,0,0,6.18535926552179,7.19933682767359,3.47942145569652,2.62188582010345,2.44615848229357,2.66315876557583,1.42358718463353,1.81168850196412,3.77002813200404,2.58643413653496,2.14460495831032,1.79763881730844,0.432276099749388,0.398282546508734,2.65535061334314,3.54170389090159,3.38123207019241,5.09128319613286,4.26695471768777,2.73529697572242,2.97211724484009,1.62371162777562,1.8839847340965,2.09775178667061,0.889357881261447,1.66845105716094,1.57247196090562,1.12431056192427,0.811440485554012,2.41177159752417,2.5462585178142,2.30156909960649,1.78348749452539,2.74561413188081,4.31304619582064,2.60498663367952,2.18426371180192,0.505157755894224,0.896987067609561,0,9.05290631816363,7.39016505904891,6.02970412835496,3.73439188705414,3.28566347603903,5.52770649557992,12.8543566078447,19.1230974900643,9.14283835815908,10.1873757238436,3.98636921643718,8.35702905050264,5.35323443784276,9.69148692496127,0,0,0.983528546038072,3.31124095565679,0.160550589987792,0,1.803284399143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| ||
|EntrezGene=18162 | |||
|HGNC= | |||
|MCL_coexpression_id=2962 | |||
|UniProt=G3X9E5,Q7TMG7,P70180 | |||
|association_with_transcript=-482bp_to_ENSMUST00000066529,NM_001039181,NM_008728,uc007vhe.1,uc007vhf.1_5end | |||
|description=CAGE_peak_2_at_Npr3_5end | |||
|id=chr15:11835911..11835937,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!9.52e-12!23;UBERON:0001009!9.52e-12!23;UBERON:0007100!6.78e-10!18;UBERON:0000948!6.78e-10!18;UBERON:0005498!6.78e-10!18;UBERON:0004140!6.78e-10!18;UBERON:0009881!6.78e-10!18;UBERON:0004141!6.78e-10!18;UBERON:0003084!6.78e-10!18;UBERON:0007005!6.78e-10!18;UBERON:0004139!6.78e-10!18;UBERON:0004291!6.78e-10!18;UBERON:0002048!7.89e-09!14;UBERON:0000117!7.89e-09!14;UBERON:0000171!7.89e-09!14;UBERON:0000170!7.89e-09!14;UBERON:0005597!7.89e-09!14;UBERON:0000118!7.89e-09!14;UBERON:0003103!3.33e-08!43;UBERON:0004872!4.00e-08!33;UBERON:0005153!8.87e-08!17;UBERON:0005157!2.39e-07!27;UBERON:0005178!2.84e-07!17;UBERON:0005181!2.84e-07!17;UBERON:0002224!2.84e-07!17;UBERON:0000915!2.84e-07!17;UBERON:0008947!2.84e-07!17;UBERON:0003258!2.84e-07!17;UBERON:0002100!4.11e-07!98;UBERON:0003914!5.22e-07!47 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,3.01e-12,23;UBERON:0001009,3.01e-12,23;UBERON:0007100,1.06e-10,18;UBERON:0000948,1.06e-10,18;UBERON:0005498,1.06e-10,18;UBERON:0004140,1.06e-10,18;UBERON:0009881,1.06e-10,18;UBERON:0004141,1.06e-10,18;UBERON:0003084,1.06e-10,18;UBERON:0007005,1.06e-10,18;UBERON:0004139,1.06e-10,18;UBERON:0004291,1.06e-10,18;UBERON:0002048,1.57e-09,14;UBERON:0000117,1.57e-09,14;UBERON:0000171,1.57e-09,14;UBERON:0000170,1.57e-09,14;UBERON:0005597,1.57e-09,14;UBERON:0000118,1.57e-09,14;UBERON:0004872,2.41e-08,33;UBERON:0005153,9.35e-08,17;UBERON:0003103,2.58e-07,43;UBERON:0005178,3.56e-07,17;UBERON:0005181,3.56e-07,17;UBERON:0002224,3.56e-07,17;UBERON:0000915,3.56e-07,17;UBERON:0008947,3.56e-07,17;UBERON:0003258,3.56e-07,17 | |||
|phase1_expression=4.16387002472464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.40173160604279,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.1291417884831,16.0175551326833,10.8292583775392,7.82391344348039,0,1.31811709640683,6.02732687130279,0.979904951377538,0,0,0,0,2.05807548828758,8.30946975822394,12.8918023069361,0,1.05798195854407,0,1.35537812827653,0.889294796111139,0.449949858640699,0,0,2.09720077362883,0.384218305321555,0.207379224616955,0.270011876663381,0.630974884054146,1.14260393761521,1.98781686856452,0.122490799214954,0.0958454710182364,0,0,0.383062014255563,0.307213066512487,0.263772575460388,0.0914876436024097,0,0.558365998002762,0,2.13917546887534,2.06240009831567,2.42031857358475,1.1183966749518,0.302904773332736,0.302286240427142,0.869593466105033,0.860423876981386,0,0,0.649776417447669,0,0.842666520790511,1.70430322578058,2.59786004602869,3.18005617059306,10.8449433228044,46.1975318691544,48.4129955442627,21.3320010945999,0.865964164044856,0.506719730950197,1.51657333504435,1.1418387971906,0,3.11728492036132,2.77576522825817,3.95805121805784,3.68984795609694,3.01445281105245,2.11659672844269,1.38233250462643,7.91023896749996,4.04878199375753,0.884610551949874,0.808834249737046,0.220841518460394,0,3.72783522436244,0.585561594023094,0.209446706813455,0,0,0,0,0.149790639404823,0,0.125654352112864,0.521472960576829,0,0,0.162241263067758,3.66621709861139,0.995255764880744,0.758168275301024,0.631325567659422,2.99277018814219,1.83921683546778,2.52086981727489,1.80845781402858,1.29269348387523,0.2562274405697,1.59292931751539,2.32833033665114,0.215567992932842,1.89106080167819,1.93546236580344,2.84954452155847,4.44875598760957,0.696504333044333,1.85203922767149,3.98068533636986,0,0,0,8.69928244649108,10.3191466391682,9.7233513188948,6.39210786080068,10.0349758191176,7.71335564436891,8.37122201101468,6.70683503499048,9.34122738937356,6.08871444679878,2.62667942526552,3.89130285820108,4.23979963533464,3.29325172936576,4.02619256281115,1.89260953707715,1.13195073617213,0,0,6.18535926552179,7.19933682767359,3.47942145569652,2.62188582010345,2.44615848229357,2.66315876557583,1.42358718463353,1.81168850196412,3.77002813200404,2.58643413653496,2.14460495831032,1.79763881730844,0.432276099749388,0.398282546508734,2.65535061334314,3.54170389090159,3.38123207019241,5.09128319613286,4.26695471768777,2.73529697572242,2.97211724484009,1.62371162777562,1.8839847340965,2.09775178667061,0.889357881261447,1.66845105716094,1.57247196090562,1.12431056192427,0.811440485554012,2.41177159752417,2.5462585178142,2.30156909960649,1.78348749452539,2.74561413188081,4.31304619582064,2.60498663367952,2.18426371180192,0.505157755894224,0.896987067609561,0,9.05290631816363,7.39016505904891,6.02970412835496,3.73439188705414,3.28566347603903,5.52770649557992,12.8543566078447,19.1230974900643,9.14283835815908,10.1873757238436,3.98636921643718,8.35702905050264,5.35323443784276,9.69148692496127,0,0,0.983528546038072,3.31124095565679,0.160550589987792,0,1.80328439914343,0.757412781613119,0.315508219416257,0.390438744296638,0.215423397732799,0.477937595905104,0.891194696329576,0,1.21443210502468,1.16902343164525,0.790575555893047,0.642642632843614,3.69044221541498,2.49291845134157,3.09485222771795,1.64970122972535,1.32745138339963,8.74010290157933,7.86041248108353,4.52652191414155,1.47650946440386,3.07435147943927,4.13485269069154,1.81766864738753,2.85197902707777,0.632073515871632,0,0,0.680879211507576,1.62054984628179,0.905510786479282,0.643011105094777,0.709360934569094,1.24858172321449,2.79733335023606,1.8267896946876,2.81606049676452,4.44847348814022,0.220528398054962,5.27636009412736,1.77610869365496,1.62844897306021,2.86493625607528,1.31312719796049,0.874442509889552,0.18542530201051,0,1.44470807574256,0.555583582109135,0,0.136694227721025,0,0,0,0,0,1.73984796469624,2.43983360552218,2.37611749807963,2.09088296014469,2.40198820120795,2.29269388854195,1.98368293740806,0.523511883968059,0.518459893167171,0,0.56369293868419,2.39226473670366,1.98550188548517,2.72231663681667,2.58319646955462,3.54807863530634,1.76035857968631,1.8228613878153,1.67774951081137,0.241584120826006,1.15212002503146,0,1.41907650703115,0.924398614483445,0.649604114888975,0.179026695667481,0.79472541912506,0,0,0.302899349844443,0.0762068066549998,0.201652370273681,0.0974578807397524,0,0.116876902181569,0.226730383615211,0,0,0,0.579568782096571,0.750729901804728,0.549454872801795,1.07184189539533,0.501572104035363,0.564751842617067,0.920650473014354,0,1.89038500578056,0,1.5107877947794,1.35004500046361,2.2516060161211,0.906284817968409,1.55328093525546,1.45302286617847,3.19219898720825,3.07320490357441,0.729320151204882,1.04806581313991,1.10306105070008,3.11145418922261,3.29656091582231,2.56735367673452,2.27427490587418,3.04175159868288,2.26351609663291,1.96647165686753,1.6646539625266,2.41228969613576,0.476293691283074,1.15884325944855,2.50781986602817,4.94503080963968,2.64958056241915,1.37147700954166,3.19456451086807,1.43061713968393,3.48831399917588,2.54095327121393,2.11536519729191,2.56099162021882,2.89376682581627,4.07412341537585,2.80571135828869,2.01679530811096,1.67457620038458,2.04615521584845,2.47898945897546,2.3148793317737,0.249810577937946,2.57324769289949,2.36358159453128,1.14772999241306,2.42650561031467,2.31867835620421 | |||
|short_description=p2@Npr3 | |||
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Revision as of 10:12, 13 September 2013
Short description: | p2@Npr3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Npr3_5end |
Coexpression cluster: | MCL_coexpression_mm9:2962 |
Association with transcript: | -482bp_to_ENSMUST00000066529, NM_001039181, NM_008728, uc007vhe.1, uc007vhf.1_5end |
EntrezGene: | Npr3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 3.01e-12 | 23 |
circulatory system | 3.01e-12 | 23 |
primary circulatory organ | 1.06e-10 | 18 |
heart | 1.06e-10 | 18 |
primitive heart tube | 1.06e-10 | 18 |
primary heart field | 1.06e-10 | 18 |
anterior lateral plate mesoderm | 1.06e-10 | 18 |
heart tube | 1.06e-10 | 18 |
heart primordium | 1.06e-10 | 18 |
cardiac mesoderm | 1.06e-10 | 18 |
cardiogenic plate | 1.06e-10 | 18 |
heart rudiment | 1.06e-10 | 18 |
lung | 1.57e-09 | 14 |
respiratory tube | 1.57e-09 | 14 |
respiration organ | 1.57e-09 | 14 |
pair of lungs | 1.57e-09 | 14 |
lung primordium | 1.57e-09 | 14 |
lung bud | 1.57e-09 | 14 |
splanchnic layer of lateral plate mesoderm | 2.41e-08 | 33 |
epithelial bud | 9.35e-08 | 17 |
compound organ | 2.58e-07 | 43 |
thoracic cavity element | 3.56e-07 | 17 |
thoracic segment organ | 3.56e-07 | 17 |
thoracic cavity | 3.56e-07 | 17 |
thoracic segment of trunk | 3.56e-07 | 17 |
respiratory primordium | 3.56e-07 | 17 |
endoderm of foregut | 3.56e-07 | 17 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.