FFCP PHASE1:Mm9::chr15:11835939..11835957,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2962|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:11835939..11835957,-|id=chr15:11835939..11835957,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004535!4.00e-09!23;UBERON:0001009!4.00e-09!23;UBERON:0002048!4.12e-09!14;UBERON:0000117!4.12e-09!14;UBERON:0000171!4.12e-09!14;UBERON:0000170!4.12e-09!14;UBERON:0005597!4.12e-09!14;UBERON:0000118!4.12e-09!14;UBERON:0005157!1.32e-08!27;UBERON:0005178!2.76e-08!17;UBERON:0005181!2.76e-08!17;UBERON:0002224!2.76e-08!17;UBERON:0000915!2.76e-08!17;UBERON:0008947!2.76e-08!17;UBERON:0003258!2.76e-08!17;UBERON:0003103!4.19e-08!43;UBERON:0007100!1.11e-07!18;UBERON:0000948!1.11e-07!18;UBERON:0005498!1.11e-07!18;UBERON:0004140!1.11e-07!18;UBERON:0009881!1.11e-07!18;UBERON:0004141!1.11e-07!18;UBERON:0003084!1.11e-07!18;UBERON:0007005!1.11e-07!18;UBERON:0004139!1.11e-07!18;UBERON:0004291!1.11e-07!18;UBERON:0005153!2.36e-07!17;UBERON:0002100!6.55e-07!98|ontology_enrichment_uberon_v019_2=UBERON:0002048,1.51e-13,14;UBERON:0000117,1.51e-13,14;UBERON:0000171,1.51e-13,14;UBERON:0000170,1.51e-13,14;UBERON:0005597,1.51e-13,14;UBERON:0000118,1.51e-13,14;UBERON:0005178,8.27e-12,17;UBERON:0005181,8.27e-12,17;UBERON:0002224,8.27e-12,17;UBERON:0000915,8.27e-12,17;UBERON:0008947,8.27e-12,17;UBERON:0003258,8.27e-12,17;UBERON:0005153,2.67e-10,17;UBERON:0004535,4.59e-10,23;UBERON:0001009,4.59e-10,23;UBERON:0005157,2.02e-09,20;UBERON:0007100,1.17e-08,18;UBERON:0000948,1.17e-08,18;UBERON:0005498,1.17e-08,18;UBERON:0004140,1.17e-08,18;UBERON:0009881,1.17e-08,18;UBERON:0004141,1.17e-08,18;UBERON:0003084,1.17e-08,18;UBERON:0007005,1.17e-08,18;UBERON:0004139,1.17e-08,18;UBERON:0004291,1.17e-08,18;UBERON:0004872,4.54e-08,33;UBERON:0003103,3.01e-07,43|phase1_expression=2.08193501236232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.1761186246079,6.38674666682942,4.9557623083654,3.9119567217402,0,0.878744730937887,1.74986909166855,0.419959264876088,0,0,0,0,0.771778308107841,2.0057340795713,5.15672092277442,0,0,0.633831403506179,0.338844532069132,0,0,0,0,0,0.384218305321555,0.414758449233911,0,0.630974884054146,1.42825492201902,0.441737081903227,0,0,0,0,0,0,0.131886287730194,0.0914876436024097,0.52091337055676,0,0,0.15279824777681,0.294628585473668,0.996601765593721,0.931997229126503,0.151452386666368,0.0755715601067855,0.289864488701678,1.72084775396277,0,0,0,0.448026887097336,0.140444420131752,0.511290967734173,0.779358013808606,0.35333957451034,3.52108549441701,12.8326477414318,12.7402619853323,14.2213340630666,0.865964164044856,1.52015919285059,0,0.5709193985953,0,1.92974780784272,2.25530924795977,0.913396434936424,1.61430848079241,1.50722640552623,0.940709657085638,0.879666139307728,3.46072954828123,0.722996784599558,0,0.485300549842228,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0.125654352112864,0.521472960576829,1.02286182932132,0,0.324482526135515,2.24046600470696,0.248813941220186,0,0.841767423545896,1.43132487258974,1.14951052216736,0.900310649026746,0.60281927134286,0.680364991513279,0.512454881139399,0.843315521037559,0.776110112217047,0.215567992932842,0.567318240503458,0.351902248327898,0.657587197282725,1.39023624612799,0.348252166522167,0.411564272815887,2.38841120182192,0,0,0,2.27838349789052,2.57978665979206,2.88099298337624,1.65721314909647,2.55793501271625,1.69693824176116,3.25547522650571,1.07309360559848,2.91913355917924,2.46839774870221,0.656669856316381,0.891756905004413,1.60819986167866,0.219550115291051,1.61047702512446,1.05144974282064,0.92614151141356,0,0,1.49301775374664,3.94802342162745,1.28867461322093,0.605050573870028,0.667134131534611,1.52180500890047,0,1.4822905925161,1.75934646160189,0.994782360205754,0.58489226135736,0,0.216138049874694,0.398282546508734,1.13800740571849,1.71372768914593,2.25415471346161,3.05476991767971,1.93952487167626,1.96380295692892,0.758838445491087,1.18088118383682,0.627994911365499,0.493588655687202,0.296452627087149,0.333690211432188,0.589676985339609,0.449724224769707,0.608580364165509,0.482354319504834,0.50925170356284,1.15078454980324,0.324270453550071,0.549122826376163,0,0.744281895337007,0.624075346229121,0.252578877947112,0.179397413521912,0,2.03228509183265,1.32643988239339,2.11854469374634,2.03694102930226,2.11221223459652,2.01007508930179,2.85652369063216,6.82967767502296,3.94087860265477,3.98636441367795,3.34855014180723,1.96635977658886,2.07221978239075,4.19482269886384,0,0,0,0.827810238914197,0.321101179975584,0,0.819674726883377,0.504941854408746,0.315508219416257,1.95219372148319,0,0.477937595905104,0.222798674082394,0,0.404810701674894,0.292255857911312,0.395287777946524,0,0.425820255624806,1.78065603667255,2.28041743095006,0.494910368917606,0,3.39892890616974,1.209294227859,0.754420319023592,0.590603785761546,0.307435147943927,1.03371317267288,1.09060118843252,0.356497378384721,0,0,0,0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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2962 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr15:11835939..11835957,- | |||
|id=chr15:11835939..11835957,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!4.00e-09!23;UBERON:0001009!4.00e-09!23;UBERON:0002048!4.12e-09!14;UBERON:0000117!4.12e-09!14;UBERON:0000171!4.12e-09!14;UBERON:0000170!4.12e-09!14;UBERON:0005597!4.12e-09!14;UBERON:0000118!4.12e-09!14;UBERON:0005157!1.32e-08!27;UBERON:0005178!2.76e-08!17;UBERON:0005181!2.76e-08!17;UBERON:0002224!2.76e-08!17;UBERON:0000915!2.76e-08!17;UBERON:0008947!2.76e-08!17;UBERON:0003258!2.76e-08!17;UBERON:0003103!4.19e-08!43;UBERON:0007100!1.11e-07!18;UBERON:0000948!1.11e-07!18;UBERON:0005498!1.11e-07!18;UBERON:0004140!1.11e-07!18;UBERON:0009881!1.11e-07!18;UBERON:0004141!1.11e-07!18;UBERON:0003084!1.11e-07!18;UBERON:0007005!1.11e-07!18;UBERON:0004139!1.11e-07!18;UBERON:0004291!1.11e-07!18;UBERON:0005153!2.36e-07!17;UBERON:0002100!6.55e-07!98 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,1.51e-13,14;UBERON:0000117,1.51e-13,14;UBERON:0000171,1.51e-13,14;UBERON:0000170,1.51e-13,14;UBERON:0005597,1.51e-13,14;UBERON:0000118,1.51e-13,14;UBERON:0005178,8.27e-12,17;UBERON:0005181,8.27e-12,17;UBERON:0002224,8.27e-12,17;UBERON:0000915,8.27e-12,17;UBERON:0008947,8.27e-12,17;UBERON:0003258,8.27e-12,17;UBERON:0005153,2.67e-10,17;UBERON:0004535,4.59e-10,23;UBERON:0001009,4.59e-10,23;UBERON:0005157,2.02e-09,20;UBERON:0007100,1.17e-08,18;UBERON:0000948,1.17e-08,18;UBERON:0005498,1.17e-08,18;UBERON:0004140,1.17e-08,18;UBERON:0009881,1.17e-08,18;UBERON:0004141,1.17e-08,18;UBERON:0003084,1.17e-08,18;UBERON:0007005,1.17e-08,18;UBERON:0004139,1.17e-08,18;UBERON:0004291,1.17e-08,18;UBERON:0004872,4.54e-08,33;UBERON:0003103,3.01e-07,43 | |||
|phase1_expression=2.08193501236232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.1761186246079,6.38674666682942,4.9557623083654,3.9119567217402,0,0.878744730937887,1.74986909166855,0.419959264876088,0,0,0,0,0.771778308107841,2.0057340795713,5.15672092277442,0,0,0.633831403506179,0.338844532069132,0,0,0,0,0,0.384218305321555,0.414758449233911,0,0.630974884054146,1.42825492201902,0.441737081903227,0,0,0,0,0,0,0.131886287730194,0.0914876436024097,0.52091337055676,0,0,0.15279824777681,0.294628585473668,0.996601765593721,0.931997229126503,0.151452386666368,0.0755715601067855,0.289864488701678,1.72084775396277,0,0,0,0.448026887097336,0.140444420131752,0.511290967734173,0.779358013808606,0.35333957451034,3.52108549441701,12.8326477414318,12.7402619853323,14.2213340630666,0.865964164044856,1.52015919285059,0,0.5709193985953,0,1.92974780784272,2.25530924795977,0.913396434936424,1.61430848079241,1.50722640552623,0.940709657085638,0.879666139307728,3.46072954828123,0.722996784599558,0,0.485300549842228,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0.125654352112864,0.521472960576829,1.02286182932132,0,0.324482526135515,2.24046600470696,0.248813941220186,0,0.841767423545896,1.43132487258974,1.14951052216736,0.900310649026746,0.60281927134286,0.680364991513279,0.512454881139399,0.843315521037559,0.776110112217047,0.215567992932842,0.567318240503458,0.351902248327898,0.657587197282725,1.39023624612799,0.348252166522167,0.411564272815887,2.38841120182192,0,0,0,2.27838349789052,2.57978665979206,2.88099298337624,1.65721314909647,2.55793501271625,1.69693824176116,3.25547522650571,1.07309360559848,2.91913355917924,2.46839774870221,0.656669856316381,0.891756905004413,1.60819986167866,0.219550115291051,1.61047702512446,1.05144974282064,0.92614151141356,0,0,1.49301775374664,3.94802342162745,1.28867461322093,0.605050573870028,0.667134131534611,1.52180500890047,0,1.4822905925161,1.75934646160189,0.994782360205754,0.58489226135736,0,0.216138049874694,0.398282546508734,1.13800740571849,1.71372768914593,2.25415471346161,3.05476991767971,1.93952487167626,1.96380295692892,0.758838445491087,1.18088118383682,0.627994911365499,0.493588655687202,0.296452627087149,0.333690211432188,0.589676985339609,0.449724224769707,0.608580364165509,0.482354319504834,0.50925170356284,1.15078454980324,0.324270453550071,0.549122826376163,0,0.744281895337007,0.624075346229121,0.252578877947112,0.179397413521912,0,2.03228509183265,1.32643988239339,2.11854469374634,2.03694102930226,2.11221223459652,2.01007508930179,2.85652369063216,6.82967767502296,3.94087860265477,3.98636441367795,3.34855014180723,1.96635977658886,2.07221978239075,4.19482269886384,0,0,0,0.827810238914197,0.321101179975584,0,0.819674726883377,0.504941854408746,0.315508219416257,1.95219372148319,0,0.477937595905104,0.222798674082394,0,0.404810701674894,0.292255857911312,0.395287777946524,0,0.425820255624806,1.78065603667255,2.28041743095006,0.494910368917606,0,3.39892890616974,1.209294227859,0.754420319023592,0.590603785761546,0.307435147943927,1.03371317267288,1.09060118843252,0.356497378384721,0,0,0,0.340439605753788,0.900305470156551,0.388076051348264,0.214337035031592,0.354680467284547,0.535106452806212,0.658196082408484,0.304464949114599,1.40803024838226,1.69465656691056,0.220528398054962,0.8244312647074,0.968786560175433,0.361877549568935,0.835606408021955,0.492422699235184,0,0.18542530201051,0,0.412773735926445,0.370389054739423,0,0,0,0,0,0,0,0.474503990371703,0.609958401380546,0.972048067396211,0.627264888043406,1.31017538247707,1.07891477107857,0.826534557253359,0,0.129614973291793,0,0,1.04661582230785,1.32366792365678,0.972255941720238,1.16243841129958,1.68956125490778,1.05621514781179,1.0416350787516,0.734015410979976,0,0,0,1.01362607645082,0.616265742988964,0,0.179026695667481,0,0.240390899039938,0,0,0,0.100826185136841,0,0,0.116876902181569,0.226730383615211,0,0,0,0.386379188064381,0.187682475451182,0.549454872801795,0.214368379079066,0,0,0.460325236507177,0,0.343706364687375,0,0,0,0,0,0.51776031175182,0.415149390336707,1.19707462020309,1.53660245178721,0.729320151204882,0.209613162627982,0.367687016900028,0.666740183404846,1.03017528619447,1.60459604795908,0,0.25347929989024,0.754505365544305,0.842773567228942,1.02440243847791,0.689225627467359,0.952587382566147,0.695305955669133,0.38581844092741,0.824171801606613,0.588795680537589,0,1.06485483695602,0.238436189947321,0.436039249896986,1.2234219453993,1.35383372626682,1.28049581010941,0.789209134313529,1.35804113845862,1.12228454331548,0.474540072496697,0.394017929502254,0.818462086339379,1.08455788830176,1.54325288784913,1.49886346762768,0.467863216890817,1.28922632428979,0.956441660344217,1.32354851471709,1.62307484934295 | |||
|short_description=p@chr15:11835939..11835957,- | |||
}} |
Revision as of 10:12, 13 September 2013
Short description: | p@chr15:11835939..11835957, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:11835939..11835957, - |
Coexpression cluster: | MCL_coexpression_mm9:2962 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung | 1.51e-13 | 14 |
respiratory tube | 1.51e-13 | 14 |
respiration organ | 1.51e-13 | 14 |
pair of lungs | 1.51e-13 | 14 |
lung primordium | 1.51e-13 | 14 |
lung bud | 1.51e-13 | 14 |
thoracic cavity element | 8.27e-12 | 17 |
thoracic segment organ | 8.27e-12 | 17 |
thoracic cavity | 8.27e-12 | 17 |
thoracic segment of trunk | 8.27e-12 | 17 |
respiratory primordium | 8.27e-12 | 17 |
endoderm of foregut | 8.27e-12 | 17 |
epithelial bud | 2.67e-10 | 17 |
cardiovascular system | 4.59e-10 | 23 |
circulatory system | 4.59e-10 | 23 |
epithelial fold | 2.02e-09 | 20 |
primary circulatory organ | 1.17e-08 | 18 |
heart | 1.17e-08 | 18 |
primitive heart tube | 1.17e-08 | 18 |
primary heart field | 1.17e-08 | 18 |
anterior lateral plate mesoderm | 1.17e-08 | 18 |
heart tube | 1.17e-08 | 18 |
heart primordium | 1.17e-08 | 18 |
cardiac mesoderm | 1.17e-08 | 18 |
cardiogenic plate | 1.17e-08 | 18 |
heart rudiment | 1.17e-08 | 18 |
splanchnic layer of lateral plate mesoderm | 4.54e-08 | 33 |
compound organ | 3.01e-07 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.