FFCP PHASE1:Mm9::chr15:97612618..97612625,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=98|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:97612618..97612625,+|id=chr15:97612618..97612625,+|ontology_enrichment_celltype=CL:0000192!1.64e-13!3;CL:0000359!1.64e-13!3;CL:0002539!1.64e-13!3;CL:0000514!1.64e-13!3;CL:0000680!1.41e-11!6;CL:0000183!1.41e-11!6;CL:0000187!1.41e-11!6;CL:0000056!1.41e-11!6;CL:0000222!6.22e-10!7;CL:0002604!6.59e-09!2;CL:0002605!6.59e-09!2;CL:0000355!9.83e-08!9|ontology_enrichment_celltype_v019_2=CL:0000192,1.70e-39,3;CL:0000359,1.70e-39,3;CL:0002539,1.70e-39,3;CL:0000514,1.70e-39,3;CL:0000680,1.98e-20,6;CL:0000187,1.98e-20,6;CL:0000056,1.98e-20,6;CL:0000222,1.08e-17,7;CL:0000355,4.91e-14,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000947!8.65e-17!4;UBERON:0001637!8.65e-17!4;UBERON:0003509!8.65e-17!4;UBERON:0004573!8.65e-17!4;UBERON:0004571!8.65e-17!4;UBERON:0010191!8.65e-17!4;UBERON:0004572!8.65e-17!4;UBERON:0001135!1.64e-13!3;UBERON:0004237!1.64e-13!3;UBERON:0004695!1.64e-13!3;UBERON:0002111!1.64e-13!3;UBERON:0004178!1.64e-13!3;UBERON:0000055!1.84e-13!5;UBERON:0001981!1.84e-13!5;UBERON:0002049!1.84e-13!5;UBERON:0007500!1.84e-13!5;UBERON:0007798!1.84e-13!5;UBERON:0004537!1.84e-13!5;UBERON:0006965!1.84e-13!5;UBERON:0001134!9.83e-08!9;UBERON:0002036!9.83e-08!9;UBERON:0002385!9.83e-08!9;UBERON:0000486!9.83e-08!9;UBERON:0001015!9.83e-08!9;UBERON:0004290!9.83e-08!9;UBERON:0003082!9.83e-08!9;UBERON:0000383!5.82e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001135,1.70e-39,3;UBERON:0004237,1.70e-39,3;UBERON:0004695,1.70e-39,3;UBERON:0002111,1.70e-39,3;UBERON:0004178,1.70e-39,3;UBERON:0000947,5.63e-30,4;UBERON:0001637,5.63e-30,4;UBERON:0004573,5.63e-30,4;UBERON:0003509,5.63e-30,4;UBERON:0004571,5.63e-30,4;UBERON:0010191,5.63e-30,4;UBERON:0004572,5.63e-30,4;UBERON:0000055,2.98e-24,5;UBERON:0007500,2.98e-24,5;UBERON:0001981,2.98e-24,5;UBERON:0002049,2.98e-24,5;UBERON:0007798,2.98e-24,5;UBERON:0004537,2.98e-24,5;UBERON:0006965,2.98e-24,5;UBERON:0001134,4.91e-14,9;UBERON:0002036,4.91e-14,9;UBERON:0002385,4.91e-14,9;UBERON:0000486,4.91e-14,9;UBERON:0007503,4.91e-14,9;UBERON:0001015,4.91e-14,9;UBERON:0002329,4.91e-14,9;UBERON:0003082,4.91e-14,9;UBERON:0003059,4.91e-14,9;UBERON:0007282,4.91e-14,9;UBERON:0004290,4.91e-14,9;UBERON:0009618,4.91e-14,9;UBERON:0000383,9.45e-13,10;UBERON:0007524,1.07e-11,11;UBERON:0003077,1.07e-11,11;UBERON:0007285,1.07e-11,11|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51076181570693,3.14268486780495,0.367093504323363,0,0,0.219686182734472,0.194429899074283,0,1.43752564364972,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0,0.117588707135705,0.125666591329675,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194451188344048,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr15:97612618..97612625,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=98 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr15:97612618..97612625,+ | |||
|id=chr15:97612618..97612625,+ | |||
|ontology_enrichment_celltype=CL:0000192!1.64e-13!3;CL:0000359!1.64e-13!3;CL:0002539!1.64e-13!3;CL:0000514!1.64e-13!3;CL:0000680!1.41e-11!6;CL:0000183!1.41e-11!6;CL:0000187!1.41e-11!6;CL:0000056!1.41e-11!6;CL:0000222!6.22e-10!7;CL:0002604!6.59e-09!2;CL:0002605!6.59e-09!2;CL:0000355!9.83e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,1.70e-39,3;CL:0000359,1.70e-39,3;CL:0002539,1.70e-39,3;CL:0000514,1.70e-39,3;CL:0000680,1.98e-20,6;CL:0000187,1.98e-20,6;CL:0000056,1.98e-20,6;CL:0000222,1.08e-17,7;CL:0000355,4.91e-14,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000947!8.65e-17!4;UBERON:0001637!8.65e-17!4;UBERON:0003509!8.65e-17!4;UBERON:0004573!8.65e-17!4;UBERON:0004571!8.65e-17!4;UBERON:0010191!8.65e-17!4;UBERON:0004572!8.65e-17!4;UBERON:0001135!1.64e-13!3;UBERON:0004237!1.64e-13!3;UBERON:0004695!1.64e-13!3;UBERON:0002111!1.64e-13!3;UBERON:0004178!1.64e-13!3;UBERON:0000055!1.84e-13!5;UBERON:0001981!1.84e-13!5;UBERON:0002049!1.84e-13!5;UBERON:0007500!1.84e-13!5;UBERON:0007798!1.84e-13!5;UBERON:0004537!1.84e-13!5;UBERON:0006965!1.84e-13!5;UBERON:0001134!9.83e-08!9;UBERON:0002036!9.83e-08!9;UBERON:0002385!9.83e-08!9;UBERON:0000486!9.83e-08!9;UBERON:0001015!9.83e-08!9;UBERON:0004290!9.83e-08!9;UBERON:0003082!9.83e-08!9;UBERON:0000383!5.82e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,1.70e-39,3;UBERON:0004237,1.70e-39,3;UBERON:0004695,1.70e-39,3;UBERON:0002111,1.70e-39,3;UBERON:0004178,1.70e-39,3;UBERON:0000947,5.63e-30,4;UBERON:0001637,5.63e-30,4;UBERON:0004573,5.63e-30,4;UBERON:0003509,5.63e-30,4;UBERON:0004571,5.63e-30,4;UBERON:0010191,5.63e-30,4;UBERON:0004572,5.63e-30,4;UBERON:0000055,2.98e-24,5;UBERON:0007500,2.98e-24,5;UBERON:0001981,2.98e-24,5;UBERON:0002049,2.98e-24,5;UBERON:0007798,2.98e-24,5;UBERON:0004537,2.98e-24,5;UBERON:0006965,2.98e-24,5;UBERON:0001134,4.91e-14,9;UBERON:0002036,4.91e-14,9;UBERON:0002385,4.91e-14,9;UBERON:0000486,4.91e-14,9;UBERON:0007503,4.91e-14,9;UBERON:0001015,4.91e-14,9;UBERON:0002329,4.91e-14,9;UBERON:0003082,4.91e-14,9;UBERON:0003059,4.91e-14,9;UBERON:0007282,4.91e-14,9;UBERON:0004290,4.91e-14,9;UBERON:0009618,4.91e-14,9;UBERON:0000383,9.45e-13,10;UBERON:0007524,1.07e-11,11;UBERON:0003077,1.07e-11,11;UBERON:0007285,1.07e-11,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51076181570693,3.14268486780495,0.367093504323363,0,0,0.219686182734472,0.194429899074283,0,1.43752564364972,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0,0.117588707135705,0.125666591329675,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194451188344048,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr15:97612618..97612625,+ | |||
}} |
Revision as of 11:45, 13 September 2013
Short description: | p@chr15:97612618..97612625, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:97612618..97612625, + |
Coexpression cluster: | MCL_coexpression_mm9:98 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 1.70e-39 | 3 |
vascular associated smooth muscle cell | 1.70e-39 | 3 |
aortic smooth muscle cell | 1.70e-39 | 3 |
smooth muscle myoblast | 1.70e-39 | 3 |
muscle precursor cell | 1.98e-20 | 6 |
muscle cell | 1.98e-20 | 6 |
myoblast | 1.98e-20 | 6 |
mesodermal cell | 1.08e-17 | 7 |
multi-potent skeletal muscle stem cell | 4.91e-14 | 9 |
Ontology term | p-value | n |
---|---|---|
smooth muscle tissue | 1.70e-39 | 3 |
blood vessel smooth muscle | 1.70e-39 | 3 |
arterial system smooth muscle | 1.70e-39 | 3 |
artery smooth muscle tissue | 1.70e-39 | 3 |
aorta smooth muscle tissue | 1.70e-39 | 3 |
aorta | 5.63e-30 | 4 |
artery | 5.63e-30 | 4 |
systemic artery | 5.63e-30 | 4 |
arterial blood vessel | 5.63e-30 | 4 |
systemic arterial system | 5.63e-30 | 4 |
aortic system | 5.63e-30 | 4 |
arterial system | 5.63e-30 | 4 |
vessel | 2.98e-24 | 5 |
epithelial tube open at both ends | 2.98e-24 | 5 |
blood vessel | 2.98e-24 | 5 |
vasculature | 2.98e-24 | 5 |
vascular system | 2.98e-24 | 5 |
blood vasculature | 2.98e-24 | 5 |
vascular cord | 2.98e-24 | 5 |
skeletal muscle tissue | 4.91e-14 | 9 |
striated muscle tissue | 4.91e-14 | 9 |
muscle tissue | 4.91e-14 | 9 |
multilaminar epithelium | 4.91e-14 | 9 |
epithelial vesicle | 4.91e-14 | 9 |
musculature | 4.91e-14 | 9 |
somite | 4.91e-14 | 9 |
myotome | 4.91e-14 | 9 |
presomitic mesoderm | 4.91e-14 | 9 |
presumptive segmental plate | 4.91e-14 | 9 |
dermomyotome | 4.91e-14 | 9 |
trunk paraxial mesoderm | 4.91e-14 | 9 |
musculature of body | 9.45e-13 | 10 |
dense mesenchyme tissue | 1.07e-11 | 11 |
paraxial mesoderm | 1.07e-11 | 11 |
presumptive paraxial mesoderm | 1.07e-11 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.