FFCP PHASE1:Mm9::chr16:10526557..10526561,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=829|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:10526557..10526561,+|id=chr16:10526557..10526561,+|ontology_enrichment_celltype=CL:0000553!1.71e-07!6;CL:0000556!1.71e-07!6|ontology_enrichment_celltype_v019_2=CL:0000553,1.09e-10,6;CL:0000556,1.09e-10,6;CL:0000839,1.47e-10,13;CL:0002476,3.35e-09,2;CL:0000763,1.82e-08,16;CL:0000050,3.81e-07,9;CL:0000049,4.94e-07,19;CL:0002031,5.10e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!2.48e-17!48;UBERON:0002390!7.31e-15!45;UBERON:0003061!7.31e-15!45;UBERON:0002405!1.85e-14!70;UBERON:0001007!2.12e-11!128;UBERON:0001555!2.12e-11!128;UBERON:0007026!2.12e-11!128;UBERON:0004119!5.32e-11!130;UBERON:0000925!5.32e-11!130;UBERON:0006595!5.32e-11!130;UBERON:0004177!9.77e-11!29;UBERON:0004921!2.46e-10!126;UBERON:0004185!2.46e-10!126;UBERON:0000065!3.10e-08!41;UBERON:0005057!3.39e-08!51;UBERON:0001041!5.03e-08!92;UBERON:0001004!6.80e-08!42;UBERON:0006562!1.16e-07!24;UBERON:0001557!1.16e-07!24;UBERON:0001042!1.16e-07!24;UBERON:0008814!1.16e-07!24;UBERON:0009145!1.16e-07!24;UBERON:0003081!1.55e-07!88;UBERON:0000926!3.27e-07!193;UBERON:0004120!3.27e-07!193;UBERON:0006603!3.27e-07!193;UBERON:0002370!3.86e-07!23;UBERON:0000974!3.86e-07!23;UBERON:0004807!3.86e-07!23;UBERON:0005058!3.86e-07!23;UBERON:0003351!3.86e-07!23;UBERON:0009113!3.86e-07!23;UBERON:0003295!3.86e-07!23;UBERON:0009722!3.86e-07!23;UBERON:0005562!3.86e-07!23;UBERON:0007690!3.86e-07!23;UBERON:0000077!4.23e-07!97|ontology_enrichment_uberon_v019_2=UBERON:0002193,4.44e-15,48;UBERON:0002405,4.44e-15,48;UBERON:0002390,4.57e-14,45;UBERON:0003061,4.57e-14,45;UBERON:0002106,2.68e-10,6;UBERON:0004457,2.68e-10,6;UBERON:0000042,2.68e-10,6;UBERON:0004854,2.68e-10,6;UBERON:0009034,2.68e-10,6;UBERON:0002095,2.68e-10,6;UBERON:0004782,2.68e-10,6;UBERON:0003281,2.68e-10,6;UBERON:0009664,2.68e-10,6;UBERON:0002296,2.68e-10,6;UBERON:0005602,2.68e-10,6;UBERON:0001179,2.68e-10,6;UBERON:0006293,2.68e-10,6;UBERON:0003887,4.30e-09,10;UBERON:0002371,1.82e-08,16;UBERON:0004177,4.57e-07,29;UBERON:0005057,4.57e-07,29;UBERON:0003081,5.10e-07,87|phase1_expression=0,0,0,0.30246421130683,0,0,0,0,0.140788722151667,0,0,0,0,0,0.333109761815663,0.202475267389826,1.39912375625629,5.52058789376916,3.15363197293199,4.2438965179803,0.17008658030214,0,0,0.799962113967033,0.45881856213434,0,0,0,0,0.504060259519861,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.5368259999053,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649776417447669,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55362730188303,0.148442139064825,0,0,0,0,0,0.125666591329675,0,0.144599356919912,0.884610551949874,0,0,0.484875253135222,0,0,0,2.29911349687732,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0.660837565967596,0.264450566663544,0,0,0,0.201683524623343,0,0,1.42358718463353,0,0.502670417600539,0,0.58489226135736,0.898819408654221,0.432276099749388,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.87536413054709,0.372140947668503,0.936113019343682,0.252578877947112,0,0.482443521363367,0.369506380333209,0,0,0,0,0,0,0,0.315270288212382,1.32878813789265,0.318909537314974,1.63863314715738,1.89953480052485,0.578596234326046,6.03165135757089,3.80733978673097,0.491764273019036,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.989820737835213,0,0,0,0,0,0,0,0,0,0,1.05418608574999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.582961673259701,0,1.87957968877638,0,0.185194527369712,2.63715839806567,1.91371918809435,1.60144721244566,0,0,0,0.954670618015114,0,0,0.108005340821801,0,0,0,0.0826534557253359,0,0.129614973291793,0,0,0,0,0,0,0.506868376472335,0,0.13020438484395,0,0,0,0,0.810900861160657,1.64337531463724,0.649604114888975,0.895133478337407,0.39736270956253,0.961563596159751,0.886137163047463,0.908698049533329,0.609654453239999,1.00826185136841,2.43644701849381,0.673482891482306,1.16876902181569,0.226730383615211,0,0,0,0,0,0.73260649706906,0,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0.263069711437843,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421|short_description=p@chr16:10526557..10526561,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=829 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr16:10526557..10526561,+ | |||
|id=chr16:10526557..10526561,+ | |||
|ontology_enrichment_celltype=CL:0000553!1.71e-07!6;CL:0000556!1.71e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,1.09e-10,6;CL:0000556,1.09e-10,6;CL:0000839,1.47e-10,13;CL:0002476,3.35e-09,2;CL:0000763,1.82e-08,16;CL:0000050,3.81e-07,9;CL:0000049,4.94e-07,19;CL:0002031,5.10e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.48e-17!48;UBERON:0002390!7.31e-15!45;UBERON:0003061!7.31e-15!45;UBERON:0002405!1.85e-14!70;UBERON:0001007!2.12e-11!128;UBERON:0001555!2.12e-11!128;UBERON:0007026!2.12e-11!128;UBERON:0004119!5.32e-11!130;UBERON:0000925!5.32e-11!130;UBERON:0006595!5.32e-11!130;UBERON:0004177!9.77e-11!29;UBERON:0004921!2.46e-10!126;UBERON:0004185!2.46e-10!126;UBERON:0000065!3.10e-08!41;UBERON:0005057!3.39e-08!51;UBERON:0001041!5.03e-08!92;UBERON:0001004!6.80e-08!42;UBERON:0006562!1.16e-07!24;UBERON:0001557!1.16e-07!24;UBERON:0001042!1.16e-07!24;UBERON:0008814!1.16e-07!24;UBERON:0009145!1.16e-07!24;UBERON:0003081!1.55e-07!88;UBERON:0000926!3.27e-07!193;UBERON:0004120!3.27e-07!193;UBERON:0006603!3.27e-07!193;UBERON:0002370!3.86e-07!23;UBERON:0000974!3.86e-07!23;UBERON:0004807!3.86e-07!23;UBERON:0005058!3.86e-07!23;UBERON:0003351!3.86e-07!23;UBERON:0009113!3.86e-07!23;UBERON:0003295!3.86e-07!23;UBERON:0009722!3.86e-07!23;UBERON:0005562!3.86e-07!23;UBERON:0007690!3.86e-07!23;UBERON:0000077!4.23e-07!97 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,4.44e-15,48;UBERON:0002405,4.44e-15,48;UBERON:0002390,4.57e-14,45;UBERON:0003061,4.57e-14,45;UBERON:0002106,2.68e-10,6;UBERON:0004457,2.68e-10,6;UBERON:0000042,2.68e-10,6;UBERON:0004854,2.68e-10,6;UBERON:0009034,2.68e-10,6;UBERON:0002095,2.68e-10,6;UBERON:0004782,2.68e-10,6;UBERON:0003281,2.68e-10,6;UBERON:0009664,2.68e-10,6;UBERON:0002296,2.68e-10,6;UBERON:0005602,2.68e-10,6;UBERON:0001179,2.68e-10,6;UBERON:0006293,2.68e-10,6;UBERON:0003887,4.30e-09,10;UBERON:0002371,1.82e-08,16;UBERON:0004177,4.57e-07,29;UBERON:0005057,4.57e-07,29;UBERON:0003081,5.10e-07,87 | |||
|phase1_expression=0,0,0,0.30246421130683,0,0,0,0,0.140788722151667,0,0,0,0,0,0.333109761815663,0.202475267389826,1.39912375625629,5.52058789376916,3.15363197293199,4.2438965179803,0.17008658030214,0,0,0.799962113967033,0.45881856213434,0,0,0,0,0.504060259519861,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.5368259999053,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649776417447669,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55362730188303,0.148442139064825,0,0,0,0,0,0.125666591329675,0,0.144599356919912,0.884610551949874,0,0,0.484875253135222,0,0,0,2.29911349687732,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0.660837565967596,0.264450566663544,0,0,0,0.201683524623343,0,0,1.42358718463353,0,0.502670417600539,0,0.58489226135736,0.898819408654221,0.432276099749388,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.87536413054709,0.372140947668503,0.936113019343682,0.252578877947112,0,0.482443521363367,0.369506380333209,0,0,0,0,0,0,0,0.315270288212382,1.32878813789265,0.318909537314974,1.63863314715738,1.89953480052485,0.578596234326046,6.03165135757089,3.80733978673097,0.491764273019036,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.989820737835213,0,0,0,0,0,0,0,0,0,0,1.05418608574999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.582961673259701,0,1.87957968877638,0,0.185194527369712,2.63715839806567,1.91371918809435,1.60144721244566,0,0,0,0.954670618015114,0,0,0.108005340821801,0,0,0,0.0826534557253359,0,0.129614973291793,0,0,0,0,0,0,0.506868376472335,0,0.13020438484395,0,0,0,0,0.810900861160657,1.64337531463724,0.649604114888975,0.895133478337407,0.39736270956253,0.961563596159751,0.886137163047463,0.908698049533329,0.609654453239999,1.00826185136841,2.43644701849381,0.673482891482306,1.16876902181569,0.226730383615211,0,0,0,0,0,0.73260649706906,0,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0.263069711437843,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | |||
|short_description=p@chr16:10526557..10526561,+ | |||
}} |
Revision as of 11:56, 13 September 2013
Short description: | p@chr16:10526557..10526561, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:10526557..10526561, + |
Coexpression cluster: | MCL_coexpression_mm9:829 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 1.09e-10 | 6 |
megakaryocyte | 1.09e-10 | 6 |
myeloid lineage restricted progenitor cell | 1.47e-10 | 13 |
bone marrow macrophage | 3.35e-09 | 2 |
myeloid cell | 1.82e-08 | 16 |
megakaryocyte-erythroid progenitor cell | 3.81e-07 | 9 |
common myeloid progenitor | 4.94e-07 | 19 |
hematopoietic lineage restricted progenitor cell | 5.10e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 4.44e-15 | 48 |
immune system | 4.44e-15 | 48 |
hematopoietic system | 4.57e-14 | 45 |
blood island | 4.57e-14 | 45 |
spleen | 2.68e-10 | 6 |
cavity lining | 2.68e-10 | 6 |
serous membrane | 2.68e-10 | 6 |
gastrointestinal system mesentery | 2.68e-10 | 6 |
stomach region | 2.68e-10 | 6 |
mesentery | 2.68e-10 | 6 |
gastrointestinal system serosa | 2.68e-10 | 6 |
mesentery of stomach | 2.68e-10 | 6 |
gut mesentery | 2.68e-10 | 6 |
dorsal mesentery | 2.68e-10 | 6 |
dorsal mesogastrium | 2.68e-10 | 6 |
peritoneal cavity | 2.68e-10 | 6 |
spleen primordium | 2.68e-10 | 6 |
intraembryonic coelom | 4.30e-09 | 10 |
bone marrow | 1.82e-08 | 16 |
hemopoietic organ | 4.57e-07 | 29 |
immune organ | 4.57e-07 | 29 |
lateral plate mesoderm | 5.10e-07 | 87 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.