FFCP PHASE1:Hg19::chr5:34823438..34823456,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=26064|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=14873|TSSclassifier=N|UniProt=Q9P0K7|association_with_transcript=-397bp_to_AL050011_5end|description=CAGE_peak_12_at_RAI14_5end|id=chr5:34823438..34823456,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000197;6.35e-10;6!CL:0000098;6.35e-10;6!CL:0002167;6.35e-10;6|ontology_enrichment_celltype_v019_2=CL:0000197,6.09e-10,6;CL:0000098,6.09e-10,6;CL:0002167,6.09e-10,6|ontology_enrichment_development_v019=UBERON:0005425;1.43e-07;1|ontology_enrichment_disease=DOID:120!1.99e-09!27;DOID:193!3.08e-09!29;DOID:2394!3.94e-08!14;DOID:14566!3.43e-07!239|ontology_enrichment_disease_v019=DOID:0060084;2.64e-19;3!DOID:127;2.64e-19;3!DOID:0060072;1.26e-14;4!DOID:2394;4.08e-11;14!DOID:120;7.02e-08;27!DOID:6193;1.43e-07;1!DOID:193;2.68e-07;29|ontology_enrichment_disease_v019_2=DOID:0060084,1.88e-19,3;DOID:127,1.88e-19,3;DOID:0060072,9.81e-15,4;DOID:2394,4.98e-11,14;DOID:120,8.69e-08,27;DOID:6193,8.84e-08,1;DOID:193,3.27e-07,29|ontology_enrichment_uberon=UBERON:0005156!1.15e-08!59;UBERON:0000990!1.15e-08!59|ontology_enrichment_uberon_v019=UBERON:0000941;1.43e-07;1!UBERON:0001785;1.43e-07;1!UBERON:0002464;1.43e-07;1!UBERON:0004904;1.43e-07;1!UBERON:0001021;1.43e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.39e-07,1;UBERON:0001785,1.39e-07,1;UBERON:0002464,1.39e-07,1;UBERON:0004904,1.39e-07,1;UBERON:0001021,1.39e-07,1;UBERON:0003902,1.39e-07,1;UBERON:0005425,1.39e-07,1|phase1_expression=0,0.428201047781966,0,0,0.446961094427288,0,0,0.631719873426831,0,0,0,0,0,0.123766352960047,0,0.672325146451775,1.20538905604795,0,0,0,0,0,0.286235987131057,0.821246550437305,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0,0.289693037921647,0,0,0.189069634328136,0.886917589850256,0.790513071238134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.825354125820202,0,0,0.35576626268671,0,0.805658634218294,1.52054421143703,0.24406205754817,0,0,0.267899184852239,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0.993943903390637,0.379891534993739,0.132409180813219,0.286836620748814,0.709336764396714,0,0,0,0,0,0.163461903113459,0,0.576175924479999,0,0.312160076830321,0,1.19558944441441,0.117434498643765,0,0,0,0,0.206651562351531,0,0.989067717114227,0,0,0.336672227908132,0,0,0,0.30648779579902,0.45071417671979,0,0.358779271377724,0.85422955527427,0.211931901159562,0,0,0.257640540045629,0.37223371266318,0.168776332241266,0.292311015483596,0.252433774244115,0.276149695926898,0,0.355009592516614,0.201504196455281,0.169560592310488,0,0,0,0.365921118388786,0.397589304964456,0,0.207322110030741,0.756962552626885,0.36497735907583,0,0,0,1.85747171212792,0,0.118306800039844,0,0.241011029883482,0.110293972732394,0,0.237270619111097,0.269662616320329,0,0,0,0,0,0,0,0,0,0,0,0.857839051492628,0.109750285408626,0,0,0.185176890317059,0,0,4.3299402607582,0.463721619900307,0.587043471179108,0.577465791044295,0,2.47330397904978,0,0,0,0,0.148631162288728,0,0.671928512795438,0.567100388969546,0.179117045405697,0,0,0,0,0,0,0,0.190493682876507,0,0,0,0,0,0,0,0,0.2933531432838,0.387815147273333,0,0.845302752556,2.12750493267896,2.08014873822732,0.257207374262142,0,0,0.428933980974443,0,0,0.325736184293735,0.355391948742546,0,0.301439377059586,0,2.7992437530976,0,0,0,0,0,0,0.144781306667579,1.43833425785268,0.179060963239896,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0.500170521059677,0,1.66376689224646,1.42743191037729,1.26161932027148,0.819989904948992,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.153461973288062,0.280660094433074,0.256278298511402,1.02341449813341,0,0,0.771048469013278,0.355123450626254,0.164254312027618,0.519254429183621,0.116210378459959,0.120859449591622,0.40101294060657,0.276242966807689,0.459257792658427,1.27463817604702,0.917870904715969,0,0.0770153371044148,0,1.46139224653261,0.73886140225013,0,0,1.72732732881711,0,0,0,0,0,0,0,0,0.256450125116389,0,0.650756789328606,0.618246069886334,0.27470839445503,0.082509499920588,0,0,0,0.193341436584244,0,0.307007349452259,0.275673144969061,0.214840489736547,0.580066775656914,0.0852266274161009,0,0.495854746082934,0.576570202095319,0,0.6069466851333,0,0.62962469366128,0.6970372701606,0,0,0,0,0.143124886741991,0,0,0.953150969619124,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0.409499734223957,0.565621727814851,0,0,0,0,0,0.655894752046633,0,0.6196469961995,0.281695602532241,0.573645408816206,0.196498082026242,0,0.354761064070598,0.211107635297664,0.329294892959902,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.106824071127473,0.962479855263359,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0.568272293612826,0,0,0,0,0.140669416410513,0.333926115068718,0,0,0.199247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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=26064 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=14873 | |||
|TSSclassifier=N | |||
|UniProt=Q9P0K7 | |||
|association_with_transcript=-397bp_to_AL050011_5end | |||
|description=CAGE_peak_12_at_RAI14_5end | |||
|id=chr5:34823438..34823456,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000197;6.35e-10;6!CL:0000098;6.35e-10;6!CL:0002167;6.35e-10;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000197,6.09e-10,6;CL:0000098,6.09e-10,6;CL:0002167,6.09e-10,6 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.43e-07;1 | |||
|ontology_enrichment_disease=DOID:120!1.99e-09!27;DOID:193!3.08e-09!29;DOID:2394!3.94e-08!14;DOID:14566!3.43e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:0060084;2.64e-19;3!DOID:127;2.64e-19;3!DOID:0060072;1.26e-14;4!DOID:2394;4.08e-11;14!DOID:120;7.02e-08;27!DOID:6193;1.43e-07;1!DOID:193;2.68e-07;29 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.88e-19,3;DOID:127,1.88e-19,3;DOID:0060072,9.81e-15,4;DOID:2394,4.98e-11,14;DOID:120,8.69e-08,27;DOID:6193,8.84e-08,1;DOID:193,3.27e-07,29 | |||
|ontology_enrichment_uberon=UBERON:0005156!1.15e-08!59;UBERON:0000990!1.15e-08!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;1.43e-07;1!UBERON:0001785;1.43e-07;1!UBERON:0002464;1.43e-07;1!UBERON:0004904;1.43e-07;1!UBERON:0001021;1.43e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.39e-07,1;UBERON:0001785,1.39e-07,1;UBERON:0002464,1.39e-07,1;UBERON:0004904,1.39e-07,1;UBERON:0001021,1.39e-07,1;UBERON:0003902,1.39e-07,1;UBERON:0005425,1.39e-07,1 | |||
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| |||
|short_description=p12@RAI14 | |||
}} |
Revision as of 15:29, 13 September 2013
Short description: | p12@RAI14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_RAI14_5end |
Coexpression cluster: | NA |
Association with transcript: | -397bp_to_AL050011_5end |
EntrezGene: | RAI14 |
HGNC: | 14873 |
UniProt: | Q9P0K7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
receptor cell | 6.09e-10 | 6 |
sensory epithelial cell | 6.09e-10 | 6 |
olfactory epithelial cell | 6.09e-10 | 6 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 1.39e-07 | 1 |
cranial nerve | 1.39e-07 | 1 |
nerve trunk | 1.39e-07 | 1 |
nerve connecting eye with brain | 1.39e-07 | 1 |
nerve | 1.39e-07 | 1 |
retinal neural layer | 1.39e-07 | 1 |
presumptive neural retina | 1.39e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.88e-19 | 3 |
leiomyoma | 1.88e-19 | 3 |
benign neoplasm | 9.81e-15 | 4 |
ovarian cancer | 4.98e-11 | 14 |
female reproductive organ cancer | 8.69e-08 | 27 |
epithelioid sarcoma | 8.84e-08 | 1 |
reproductive organ cancer | 3.27e-07 | 29 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.