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FFCP PHASE1:Hg19::chr5:54281688..54281697,-: Difference between revisions

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{{FFCP
{{FFCP|DPIdataset=robustDPI|EntrezGene=11082|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3466|TSSclassifier=S|UniProt=Q9NQ30|association_with_transcript=-197bp_to_ENST00000381405_5end|coexpression_cluster_id=C4506|description=CAGE_peak_6_at_ESM1_5end|id=chr5:54281688..54281697,-|ontology_enrichment_celltype=CL:0000222!2.98e-20!119;CL:0000359!5.94e-20!32;CL:0002139!1.35e-18!24;CL:0000192!2.23e-15!42;CL:0000514!2.23e-15!42;CL:0000680!6.40e-14!57;CL:0000056!6.40e-14!57;CL:0000355!6.40e-14!57;CL:0000187!7.31e-14!54;CL:0000071!1.24e-13!18;CL:0002546!1.24e-13!18;CL:0000183!3.32e-13!59;CL:0000393!9.40e-12!60;CL:0000211!9.40e-12!60;CL:0000055!2.62e-11!180;CL:0000115!3.78e-11!35;CL:0002539!1.46e-10!10;CL:0002595!6.61e-10!5;CL:0000220!2.78e-08!246;CL:0002321!4.17e-08!248;CL:0002078!6.52e-08!44;CL:0000213!1.25e-07!57;CL:0000215!1.25e-07!57|ontology_enrichment_celltype_v019=CL:0002595;2.65e-17;5!CL:0000359;1.01e-13;32!CL:0002593;7.51e-12;2!CL:0002589;6.09e-11;2!CL:0000192;4.54e-10;43!CL:0002573;2.00e-08;2!CL:0002601;8.43e-07;1|ontology_enrichment_celltype_v019_2=CL:0002595,3.20e-17,5;CL:0000359,2.71e-14,32;CL:0000192,1.86e-12,43;CL:0000514,1.86e-12,43;CL:0002593,9.31e-12,2;CL:0002589,1.31e-10,2;CL:0000222,8.96e-10,121;CL:0000187,2.78e-09,55;CL:0000680,1.07e-08,58;CL:0000056,1.07e-08,58;CL:0000355,1.07e-08,58;CL:0002573,2.01e-08,2;CL:0000393,3.62e-08,61;CL:0000211,3.62e-08,61;CL:0002601,7.77e-07,1|ontology_enrichment_development_v019=CL:0000514;4.54e-10;43|ontology_enrichment_disease=DOID:2394!1.75e-07!14|ontology_enrichment_disease_v019=DOID:0060072;1.60e-12;4!DOID:2394;4.44e-09;14!DOID:201;1.69e-08;6!DOID:0060100;1.69e-08;6!DOID:0060084;5.22e-08;3!DOID:127;5.22e-08;3|ontology_enrichment_disease_v019_2=DOID:0060072,1.22e-12,4;DOID:2394,3.24e-09,14;DOID:201,1.52e-08,6;DOID:0060100,1.52e-08,6;DOID:0060084,4.87e-08,3;DOID:127,4.87e-08,3;DOID:0060085,9.67e-07,1;DOID:3165,9.67e-07,1;DOID:0060121,9.67e-07,1;DOID:2438,9.67e-07,1;DOID:4418,9.67e-07,1|ontology_enrichment_uberon=UBERON:0000055!1.22e-33!69;UBERON:0001637!8.63e-31!42;UBERON:0003509!8.63e-31!42;UBERON:0004572!8.63e-31!42;UBERON:0004573!8.66e-31!33;UBERON:0004571!8.66e-31!33;UBERON:0001981!9.70e-31!60;UBERON:0007500!9.70e-31!60;UBERON:0004537!9.70e-31!60;UBERON:0006965!9.70e-31!60;UBERON:0002049!1.11e-27!79;UBERON:0007798!1.11e-27!79;UBERON:0004872!1.99e-26!84;UBERON:0004535!7.22e-24!110;UBERON:0001009!7.61e-23!113;UBERON:0003914!4.91e-19!118;UBERON:0000947!1.32e-15!21;UBERON:0010191!1.32e-15!21;UBERON:0000490!1.32e-15!138;UBERON:0001986!1.24e-13!18;UBERON:0004638!1.24e-13!18;UBERON:0004852!1.24e-13!18;UBERON:0001134!1.63e-12!61;UBERON:0002036!1.63e-12!61;UBERON:0003082!1.63e-12!61;UBERON:0000487!2.21e-12!22;UBERON:0002385!7.01e-12!63;UBERON:0001015!7.01e-12!63;UBERON:0000383!7.01e-12!63;UBERON:0004290!6.50e-11!70;UBERON:0004237!1.46e-10!10;UBERON:0004695!1.46e-10!10;UBERON:0002111!1.46e-10!10;UBERON:0004178!1.46e-10!10;UBERON:0006914!1.91e-10!25;UBERON:0003834!6.61e-10!5;UBERON:0001533!6.61e-10!5;UBERON:0000486!5.40e-09!82;UBERON:0000914!7.58e-09!83;UBERON:0002329!7.58e-09!83;UBERON:0003077!7.58e-09!83;UBERON:0003059!7.58e-09!83;UBERON:0007282!7.58e-09!83;UBERON:0009618!7.58e-09!83;UBERON:0007285!7.58e-09!83;UBERON:0000025!1.31e-08!194;UBERON:0004111!2.60e-08!241;UBERON:0000119!2.57e-07!312;UBERON:0000483!4.39e-07!309|ontology_enrichment_uberon_v019=UBERON:0004573;4.01e-19;33!UBERON:0004571;4.01e-19;33!UBERON:0003834;2.65e-17;5!UBERON:0001533;2.65e-17;5!UBERON:0001637;4.78e-16;42!UBERON:0003509;4.78e-16;42!UBERON:0004572;4.78e-16;42!UBERON:0003513;2.13e-12;7!UBERON:0002456;7.51e-12;2!UBERON:0001529;6.09e-11;2!UBERON:0007204;6.09e-11;2!UBERON:0007500;1.86e-08;56!UBERON:0001981;1.86e-08;56!UBERON:0004537;1.86e-08;56!UBERON:0000055;3.43e-08;65|ontology_enrichment_uberon_v019_2=UBERON:0004573,7.58e-20,33;UBERON:0004571,7.58e-20,33;UBERON:0001637,9.96e-18,42;UBERON:0003509,9.96e-18,42;UBERON:0004572,9.96e-18,42;UBERON:0003834,3.20e-17,5;UBERON:0001533,3.20e-17,5;UBERON:0007500,3.69e-16,59;UBERON:0001981,3.69e-16,59;UBERON:0004537,3.69e-16,59;UBERON:0006965,3.69e-16,59;UBERON:0000055,1.26e-15,68;UBERON:0002049,3.49e-13,78;UBERON:0007798,3.49e-13,78;UBERON:0003513,2.44e-12,7;UBERON:0002456,9.31e-12,2;UBERON:0001529,1.31e-10,2;UBERON:0007204,1.31e-10,2;UBERON:0004872,1.42e-10,83;UBERON:0004535,1.75e-08,109;UBERON:0001009,3.60e-08,112;UBERON:0001134,5.29e-08,62;UBERON:0002036,5.29e-08,62;UBERON:0003082,5.29e-08,62;UBERON:0002385,1.09e-07,64;UBERON:0001015,1.09e-07,64;UBERON:0000383,1.09e-07,64;UBERON:0000490,2.72e-07,148;UBERON:0002329,9.82e-07,71;UBERON:0003059,9.82e-07,71;UBERON:0007282,9.82e-07,71;UBERON:0004290,9.82e-07,71;UBERON:0009618,9.82e-07,71|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,0,0,0,0,0,0.672325146451775,0,0.730310090387373,0.487932798790507,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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|DPIdataset=robustDPI
|EntrezGene=11082
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=3466
|TSSclassifier=S
|UniProt=Q9NQ30
|association_with_transcript=-197bp_to_ENST00000381405_5end
|coexpression_cluster_id=C4506
|description=CAGE_peak_6_at_ESM1_5end
|id=chr5:54281688..54281697,-
|ontology_enrichment_celltype=CL:0000222!2.98e-20!119;CL:0000359!5.94e-20!32;CL:0002139!1.35e-18!24;CL:0000192!2.23e-15!42;CL:0000514!2.23e-15!42;CL:0000680!6.40e-14!57;CL:0000056!6.40e-14!57;CL:0000355!6.40e-14!57;CL:0000187!7.31e-14!54;CL:0000071!1.24e-13!18;CL:0002546!1.24e-13!18;CL:0000183!3.32e-13!59;CL:0000393!9.40e-12!60;CL:0000211!9.40e-12!60;CL:0000055!2.62e-11!180;CL:0000115!3.78e-11!35;CL:0002539!1.46e-10!10;CL:0002595!6.61e-10!5;CL:0000220!2.78e-08!246;CL:0002321!4.17e-08!248;CL:0002078!6.52e-08!44;CL:0000213!1.25e-07!57;CL:0000215!1.25e-07!57
|ontology_enrichment_celltype_v019=CL:0002595;2.65e-17;5!CL:0000359;1.01e-13;32!CL:0002593;7.51e-12;2!CL:0002589;6.09e-11;2!CL:0000192;4.54e-10;43!CL:0002573;2.00e-08;2!CL:0002601;8.43e-07;1
|ontology_enrichment_celltype_v019_2=CL:0002595,3.20e-17,5;CL:0000359,2.71e-14,32;CL:0000192,1.86e-12,43;CL:0000514,1.86e-12,43;CL:0002593,9.31e-12,2;CL:0002589,1.31e-10,2;CL:0000222,8.96e-10,121;CL:0000187,2.78e-09,55;CL:0000680,1.07e-08,58;CL:0000056,1.07e-08,58;CL:0000355,1.07e-08,58;CL:0002573,2.01e-08,2;CL:0000393,3.62e-08,61;CL:0000211,3.62e-08,61;CL:0002601,7.77e-07,1
|ontology_enrichment_development_v019=CL:0000514;4.54e-10;43
|ontology_enrichment_disease=DOID:2394!1.75e-07!14
|ontology_enrichment_disease_v019=DOID:0060072;1.60e-12;4!DOID:2394;4.44e-09;14!DOID:201;1.69e-08;6!DOID:0060100;1.69e-08;6!DOID:0060084;5.22e-08;3!DOID:127;5.22e-08;3
|ontology_enrichment_disease_v019_2=DOID:0060072,1.22e-12,4;DOID:2394,3.24e-09,14;DOID:201,1.52e-08,6;DOID:0060100,1.52e-08,6;DOID:0060084,4.87e-08,3;DOID:127,4.87e-08,3;DOID:0060085,9.67e-07,1;DOID:3165,9.67e-07,1;DOID:0060121,9.67e-07,1;DOID:2438,9.67e-07,1;DOID:4418,9.67e-07,1
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|short_description=p6@ESM1
}}

Revision as of 15:52, 13 September 2013

Short description:p6@ESM1
Species:Human (Homo sapiens)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_6_at_ESM1_5end
Coexpression cluster:C4506_mesothelioma_schwannoma_Smooth_thyroid_leiomyoma_osteosarcoma_fibrous
Association with transcript: -197bp_to_ENST00000381405_5end
EntrezGene:ESM1
HGNC: 3466
UniProt: Q9NQ30
Genome view:ZENBU


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data









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