FFCP PHASE1:Mm9::chr19:14672521..14672578,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=21888|HGNC=|UniProt=Q62441,Q9WUL2,Q62440,Q5SQA5|association_with_transcript=-48bp_to_ENSMUST00000052011,NM_011600,uc008gwk.1,uc008gwl.1,uc008gwm.1_5end|description=CAGE_peak_1_at_Tle4_5end|id=chr19:14672521..14672578,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003056!2.29e-12!49;UBERON:0003080!4.94e-10!40;UBERON:0002780!6.01e-10!39;UBERON:0001890!6.01e-10!39;UBERON:0006240!6.01e-10!39;UBERON:0000033!4.75e-08!63;UBERON:0001049!2.28e-07!52;UBERON:0005068!2.28e-07!52;UBERON:0006241!2.28e-07!52;UBERON:0007135!2.28e-07!52;UBERON:0000955!2.98e-07!50;UBERON:0006238!2.98e-07!50;UBERON:0002616!3.89e-07!49;UBERON:0002791!6.88e-07!29;UBERON:0003528!6.88e-07!29;UBERON:0001893!6.88e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0003056,2.29e-12,49;UBERON:0000160,3.24e-10,31;UBERON:0003080,4.94e-10,40;UBERON:0002780,6.01e-10,39;UBERON:0001890,6.01e-10,39;UBERON:0006240,6.01e-10,39;UBERON:0002346,1.05e-09,64;UBERON:0003075,1.05e-09,64;UBERON:0007284,1.05e-09,64;UBERON:0010371,2.08e-08,73;UBERON:0000955,8.08e-08,47;UBERON:0006238,8.08e-08,47;UBERON:0002616,1.05e-07,46;UBERON:0001049,2.28e-07,52;UBERON:0005068,2.28e-07,52;UBERON:0006241,2.28e-07,52;UBERON:0007135,2.28e-07,52;UBERON:0005409,2.40e-07,47;UBERON:0000073,5.68e-07,54;UBERON:0003528,6.88e-07,29;UBERON:0002791,6.88e-07,29;UBERON:0001893,6.88e-07,29|phase1_expression=20.178754735204,47.4606554389531,33.2149444754361,110.096972915686,79.6424210614692,30.8897860317877,39.9477615418349,47.5173830265001,133.890074766235,111.414714529269,16.4369249496485,17.8689636149554,83.3747554764972,75.2689664827568,15.3230490435205,24.7019826215588,19.5877325875881,57.2563830125201,62.6612961578226,39.4682376172168,25.9382034960763,13.4042784121195,11.2315909329742,50.8775904483033,43.128944840628,26.4146703492909,31.8763877157715,37.0610520219729,63.6578455178853,59.7311407531036,21.5078595335646,25.4012269383852,21.52726756546,0,32.3513814121428,24.7689621584154,37.9755002648007,53.9905803650611,39.8481025707138,61.2522780449344,75.2936304679698,71.0367304356784,55.8336905985827,9.31636453019272,10.239070053171,7.52541683862894,11.7358701652206,8.06693078607652,21.3095597252438,13.026803237977,9.93903593540074,4.31257693094915,93.4549115741592,79.7898356212479,96.1228265547447,5.40244815675489,7.73640287834643,6.70373719960675,71.6200271442976,77.7616739529888,57.6786577190623,10.8430250262122,13.3394219416671,25.6471419425199,21.7550599764734,24.1563239081674,15.579205746957,21.5162250980071,69.5757298589885,80.3285333073559,64.3594381735229,27.1368435183613,31.1424642741775,57.6931664302434,51.3731724657747,50.5570332635512,19.82085857989,29.6234624357635,32.8717981168361,86.2536321755468,77.0325959132289,94.8062334413303,27.6391169011367,42.7699583624077,33.004421519791,22.9810296669461,43.4233626437264,42.1262747565179,9.76867893998074,8.76630097238712,104.351215932604,12.0459342777394,16.9992833426938,8.63525106620507,39.6363614643078,32.2579358710082,27.6675507659551,1.87473354835864,1.03914401841148,0.35333957451034,20.703982707172,1.28326477414318,0,0,7.57718643539249,6.33399663687746,7.58286667522175,24.3211663801598,75.350924141327,17.6646145487141,21.8591511725331,15.5277393939192,16.1430848079241,15.3737093363675,15.7568867561844,13.571991863605,108.024200899921,25.0156887471447,38.0382537338446,20.2208562434261,28.2677143629304,30.547140947519,54.0536107532554,33.0842300623048,17.1746299587033,81.7462576667492,33.5482348616577,16.197373736822,28.7178713185126,38.1966130482298,70.9125934368871,77.9056983099759,43.1084314076846,37.0787413128979,36.362907797923,44.6163473436334,22.3028206832193,26.8719056517801,13.8997517138521,37.0377666360194,67.2722690117178,36.7843367093557,61.0410620040134,53.8016199673503,52.7963233414304,53.2953076384975,43.7587053693934,49.153640440413,53.8919982332106,55.408081489171,48.5625102692499,31.3449897371432,48.6582686144796,39.0042426504827,32.1020132796392,35.4280994936918,15.4486901208912,14.411482798424,19.3231179589003,18.6413195281952,24.6252362980151,22.3276956211658,27.2256445922992,20.46348010173,22.5229984815572,24.8811320882936,21.1935987105699,18.9159854634815,14.3167069424728,19.5359282254123,22.456060244202,20.6141982269719,25.2482632584708,20.3993756515765,43.9505992499026,53.4074938248486,99.1256348951394,60.5591797659516,59.9339984004007,56.8979846058074,50.3871773769385,59.0932727146394,65.156766846547,56.1165597032049,75.4501207855773,56.3270425156117,62.0797965736666,53.7182474511107,56.1496570903066,88.9831214567679,77.5935599050152,71.0934345518091,39.2612554972879,36.9022695729424,39.4477074855781,39.7120089298363,36.6570200746813,28.1244637760177,27.6976032604247,28.4887585600632,22.4508180813166,22.0880923420023,26.3842838107563,29.5315837117486,24.3733153940372,25.8591429242582,24.5460746880089,21.2235900582127,19.3515647353879,22.4402987211632,18.9698215326791,13.1789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| ||
|EntrezGene=21888 | |||
|HGNC= | |||
|UniProt=Q62441,Q9WUL2,Q62440,Q5SQA5 | |||
|association_with_transcript=-48bp_to_ENSMUST00000052011,NM_011600,uc008gwk.1,uc008gwl.1,uc008gwm.1_5end | |||
|description=CAGE_peak_1_at_Tle4_5end | |||
|id=chr19:14672521..14672578,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003056!2.29e-12!49;UBERON:0003080!4.94e-10!40;UBERON:0002780!6.01e-10!39;UBERON:0001890!6.01e-10!39;UBERON:0006240!6.01e-10!39;UBERON:0000033!4.75e-08!63;UBERON:0001049!2.28e-07!52;UBERON:0005068!2.28e-07!52;UBERON:0006241!2.28e-07!52;UBERON:0007135!2.28e-07!52;UBERON:0000955!2.98e-07!50;UBERON:0006238!2.98e-07!50;UBERON:0002616!3.89e-07!49;UBERON:0002791!6.88e-07!29;UBERON:0003528!6.88e-07!29;UBERON:0001893!6.88e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003056,2.29e-12,49;UBERON:0000160,3.24e-10,31;UBERON:0003080,4.94e-10,40;UBERON:0002780,6.01e-10,39;UBERON:0001890,6.01e-10,39;UBERON:0006240,6.01e-10,39;UBERON:0002346,1.05e-09,64;UBERON:0003075,1.05e-09,64;UBERON:0007284,1.05e-09,64;UBERON:0010371,2.08e-08,73;UBERON:0000955,8.08e-08,47;UBERON:0006238,8.08e-08,47;UBERON:0002616,1.05e-07,46;UBERON:0001049,2.28e-07,52;UBERON:0005068,2.28e-07,52;UBERON:0006241,2.28e-07,52;UBERON:0007135,2.28e-07,52;UBERON:0005409,2.40e-07,47;UBERON:0000073,5.68e-07,54;UBERON:0003528,6.88e-07,29;UBERON:0002791,6.88e-07,29;UBERON:0001893,6.88e-07,29 | |||
|phase1_expression=20.178754735204,47.4606554389531,33.2149444754361,110.096972915686,79.6424210614692,30.8897860317877,39.9477615418349,47.5173830265001,133.890074766235,111.414714529269,16.4369249496485,17.8689636149554,83.3747554764972,75.2689664827568,15.3230490435205,24.7019826215588,19.5877325875881,57.2563830125201,62.6612961578226,39.4682376172168,25.9382034960763,13.4042784121195,11.2315909329742,50.8775904483033,43.128944840628,26.4146703492909,31.8763877157715,37.0610520219729,63.6578455178853,59.7311407531036,21.5078595335646,25.4012269383852,21.52726756546,0,32.3513814121428,24.7689621584154,37.9755002648007,53.9905803650611,39.8481025707138,61.2522780449344,75.2936304679698,71.0367304356784,55.8336905985827,9.31636453019272,10.239070053171,7.52541683862894,11.7358701652206,8.06693078607652,21.3095597252438,13.026803237977,9.93903593540074,4.31257693094915,93.4549115741592,79.7898356212479,96.1228265547447,5.40244815675489,7.73640287834643,6.70373719960675,71.6200271442976,77.7616739529888,57.6786577190623,10.8430250262122,13.3394219416671,25.6471419425199,21.7550599764734,24.1563239081674,15.579205746957,21.5162250980071,69.5757298589885,80.3285333073559,64.3594381735229,27.1368435183613,31.1424642741775,57.6931664302434,51.3731724657747,50.5570332635512,19.82085857989,29.6234624357635,32.8717981168361,86.2536321755468,77.0325959132289,94.8062334413303,27.6391169011367,42.7699583624077,33.004421519791,22.9810296669461,43.4233626437264,42.1262747565179,9.76867893998074,8.76630097238712,104.351215932604,12.0459342777394,16.9992833426938,8.63525106620507,39.6363614643078,32.2579358710082,27.6675507659551,1.87473354835864,1.03914401841148,0.35333957451034,20.703982707172,1.28326477414318,0,0,7.57718643539249,6.33399663687746,7.58286667522175,24.3211663801598,75.350924141327,17.6646145487141,21.8591511725331,15.5277393939192,16.1430848079241,15.3737093363675,15.7568867561844,13.571991863605,108.024200899921,25.0156887471447,38.0382537338446,20.2208562434261,28.2677143629304,30.547140947519,54.0536107532554,33.0842300623048,17.1746299587033,81.7462576667492,33.5482348616577,16.197373736822,28.7178713185126,38.1966130482298,70.9125934368871,77.9056983099759,43.1084314076846,37.0787413128979,36.362907797923,44.6163473436334,22.3028206832193,26.8719056517801,13.8997517138521,37.0377666360194,67.2722690117178,36.7843367093557,61.0410620040134,53.8016199673503,52.7963233414304,53.2953076384975,43.7587053693934,49.153640440413,53.8919982332106,55.408081489171,48.5625102692499,31.3449897371432,48.6582686144796,39.0042426504827,32.1020132796392,35.4280994936918,15.4486901208912,14.411482798424,19.3231179589003,18.6413195281952,24.6252362980151,22.3276956211658,27.2256445922992,20.46348010173,22.5229984815572,24.8811320882936,21.1935987105699,18.9159854634815,14.3167069424728,19.5359282254123,22.456060244202,20.6141982269719,25.2482632584708,20.3993756515765,43.9505992499026,53.4074938248486,99.1256348951394,60.5591797659516,59.9339984004007,56.8979846058074,50.3871773769385,59.0932727146394,65.156766846547,56.1165597032049,75.4501207855773,56.3270425156117,62.0797965736666,53.7182474511107,56.1496570903066,88.9831214567679,77.5935599050152,71.0934345518091,39.2612554972879,36.9022695729424,39.4477074855781,39.7120089298363,36.6570200746813,28.1244637760177,27.6976032604247,28.4887585600632,22.4508180813166,22.0880923420023,26.3842838107563,29.5315837117486,24.3733153940372,25.8591429242582,24.5460746880089,21.2235900582127,19.3515647353879,22.4402987211632,18.9698215326791,13.1789478330279,7.18841032636773,16.3742016974142,17.4741096944154,11.6186283855671,17.4015491116255,19.7801843758981,36.9506380333209,19.7071068241304,22.9780616783256,28.6869194960068,35.6729177398523,62.6473402832391,56.1782992490992,53.0763522173213,43.8225700615211,36.9846031713454,36.993506328537,42.4405985113761,36.9545861193017,38.3320005241006,69.3639906120652,62.5491536391516,22.6211565588757,25.6621174063401,32.1101179975584,30.592250200565,5.57378814280696,37.6181681534516,40.0695438658646,41.3865068954437,27.3587715120655,16.010909462821,16.0415045339324,13.3045969470751,58.6975517428597,59.3279391559963,54.5497133566202,38.5585579706168,16.6069899693674,13.3549202750441,13.845391545054,22.9308470931824,6.63725691699814,9.46844481004428,9.97667737983678,7.35559811048003,7.67784921490009,9.22305443831782,17.3146956422708,9.81541069589265,14.6163925137736,14.8537276229834,13.7044191147498,10.3135543248187,109.961992658474,55.8189391497062,38.1608117159126,44.3677662515396,105.694779250795,77.2336980216966,70.9206278795141,39.5804433848979,11.9682571112492,15.6755732439227,15.6575162619023,52.9284871942151,29.063596805263,28.5280134910177,29.6043413127778,36.7675615428937,77.8253833801701,29.2971977176605,34.0033052787727,24.5600372876235,28.1495681601962,31.4575323197834,39.2312433559342,29.0548279972284,30.7660958288878,39.6062610075952,32.4769938440396,13.3653886522116,60.8946787643685,36.1908651485791,37.6938639468086,35.54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| |||
|short_description=p1@Tle4 | |||
}} |
Revision as of 17:06, 13 September 2013
Short description: | p1@Tle4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tle4_5end |
Coexpression cluster: | NA |
Association with transcript: | -48bp_to_ENSMUST00000052011, NM_011600, uc008gwk.1, uc008gwl.1, uc008gwm.1_5end |
EntrezGene: | Tle4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pre-chordal neural plate | 2.29e-12 | 49 |
intestine | 3.24e-10 | 31 |
anterior neural tube | 4.94e-10 | 40 |
regional part of forebrain | 6.01e-10 | 39 |
forebrain | 6.01e-10 | 39 |
future forebrain | 6.01e-10 | 39 |
neurectoderm | 1.05e-09 | 64 |
neural plate | 1.05e-09 | 64 |
presumptive neural plate | 1.05e-09 | 64 |
ecto-epithelium | 2.08e-08 | 73 |
brain | 8.08e-08 | 47 |
future brain | 8.08e-08 | 47 |
regional part of brain | 1.05e-07 | 46 |
neural tube | 2.28e-07 | 52 |
neural rod | 2.28e-07 | 52 |
future spinal cord | 2.28e-07 | 52 |
neural keel | 2.28e-07 | 52 |
gastrointestinal system | 2.40e-07 | 47 |
regional part of nervous system | 5.68e-07 | 54 |
brain grey matter | 6.88e-07 | 29 |
regional part of telencephalon | 6.88e-07 | 29 |
telencephalon | 6.88e-07 | 29 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.