FFCP PHASE1:Hg19::chr6:105624141..105624151,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=64208|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding|HGNC=17649|TSSclassifier=S|UniProt=|association_with_transcript=-11bp_to_NR_024539,uc003pra.2_5end|coexpression_cluster_id=C21|description=CAGE_peak_7_at_POPDC3_5end|id=chr6:105624141..105624151,-|ontology_enrichment_celltype=CL:0000594!6.28e-09!3|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:162!9.06e-07!235|ontology_enrichment_disease_v019=DOID:1036;1.08e-22;8|ontology_enrichment_disease_v019_2=DOID:1036,1.08e-22,8|ontology_enrichment_uberon=UBERON:0006331!3.97e-09!3;UBERON:0002298!7.64e-09!8;UBERON:0002308!1.03e-07!9;UBERON:0000125!1.03e-07!9|ontology_enrichment_uberon_v019=UBERON:0002331;8.92e-19;10!UBERON:0000178;9.45e-13;15!UBERON:0000179;9.45e-13;15!UBERON:0000463;9.45e-13;15!UBERON:0000478;3.37e-08;24!UBERON:0003729;4.81e-07;13|ontology_enrichment_uberon_v019_2=UBERON:0002331,8.92e-19,10;UBERON:0000358,8.92e-19,10;UBERON:0000307,8.92e-19,10;UBERON:0000091,8.92e-19,10;UBERON:0000087,8.92e-19,10;UBERON:0007010,8.92e-19,10;UBERON:0007806,8.92e-19,10;UBERON:0008780,8.92e-19,10;UBERON:0005728,8.92e-19,10;UBERON:0000178,9.45e-13,15;UBERON:0000179,9.45e-13,15;UBERON:0000463,9.45e-13,15;UBERON:0000478,3.37e-08,24;UBERON:0003729,5.11e-07,13|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232401601740905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,1.18800285728205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165018999841176,0,0,0,0,0,0,0,0.214840489736547,0.145016693914229,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329607748453519,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0.538545866458633,0,0,0,0,0,0,0,1.35357396370308,1.56850027454192,1.67821586975843,0,0,0,0,0,0,0,0,0,9.4886761177799,5.93106906943214,5.8476291723055,0,0,0,0,0.19566461893209,0,0,0,0,0,0.150323419414493,0,0,0.330991955875499,0,0,0,0,0.173559738335131,0,0.0870592065804026,0,0.343972064943233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.99402028452346,0,0,0,0.305994652908965,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0.316801009558219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.26446520348538,1.71086837884329,0,0,0,0,0,0.790446527591777,0,0,0,0,0,0,0,0,0,0.1251909307065,0.573409195690071,0,0.124192805882767,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0.228840068396924,0.302461847526478,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0.464033759878494,0,0,0,0,0,0,0.643324774124777,0,0,0,0.734210113519403,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0.383683113910955,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,3.30315225373673,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345701962667338,0,0,0,0.472775363535873,0.111231401892069,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62041277132864,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0.357107877211315,0,0.0802413666891683,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65225443763838,0.803892390468535,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0|short_description=p7@POPDC3}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=64208 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=17649 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-11bp_to_NR_024539,uc003pra.2_5end | |||
|coexpression_cluster_id=C21 | |||
|description=CAGE_peak_7_at_POPDC3_5end | |||
|id=chr6:105624141..105624151,- | |||
|ontology_enrichment_celltype=CL:0000594!6.28e-09!3 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!9.06e-07!235 | |||
|ontology_enrichment_disease_v019=DOID:1036;1.08e-22;8 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,1.08e-22,8 | |||
|ontology_enrichment_uberon=UBERON:0006331!3.97e-09!3;UBERON:0002298!7.64e-09!8;UBERON:0002308!1.03e-07!9;UBERON:0000125!1.03e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;8.92e-19;10!UBERON:0000178;9.45e-13;15!UBERON:0000179;9.45e-13;15!UBERON:0000463;9.45e-13;15!UBERON:0000478;3.37e-08;24!UBERON:0003729;4.81e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,8.92e-19,10;UBERON:0000358,8.92e-19,10;UBERON:0000307,8.92e-19,10;UBERON:0000091,8.92e-19,10;UBERON:0000087,8.92e-19,10;UBERON:0007010,8.92e-19,10;UBERON:0007806,8.92e-19,10;UBERON:0008780,8.92e-19,10;UBERON:0005728,8.92e-19,10;UBERON:0000178,9.45e-13,15;UBERON:0000179,9.45e-13,15;UBERON:0000463,9.45e-13,15;UBERON:0000478,3.37e-08,24;UBERON:0003729,5.11e-07,13 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232401601740905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,1.18800285728205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165018999841176,0,0,0,0,0,0,0,0.214840489736547,0.145016693914229,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329607748453519,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0.538545866458633,0,0,0,0,0,0,0,1.35357396370308,1.56850027454192,1.67821586975843,0,0,0,0,0,0,0,0,0,9.4886761177799,5.93106906943214,5.8476291723055,0,0,0,0,0.19566461893209,0,0,0,0,0,0.150323419414493,0,0,0.330991955875499,0,0,0,0,0.173559738335131,0,0.0870592065804026,0,0.343972064943233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.99402028452346,0,0,0,0.305994652908965,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0.316801009558219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.26446520348538,1.71086837884329,0,0,0,0,0,0.790446527591777,0,0,0,0,0,0,0,0,0,0.1251909307065,0.573409195690071,0,0.124192805882767,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0.228840068396924,0.302461847526478,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0.464033759878494,0,0,0,0,0,0,0.643324774124777,0,0,0,0.734210113519403,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0.383683113910955,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,3.30315225373673,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345701962667338,0,0,0,0.472775363535873,0.111231401892069,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62041277132864,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0.357107877211315,0,0.0802413666891683,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65225443763838,0.803892390468535,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p7@POPDC3 | |||
}} |
Revision as of 17:10, 13 September 2013
Short description: | p7@POPDC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_POPDC3_5end |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | -11bp_to_NR_024539, uc003pra.2_5end |
EntrezGene: | POPDC3 |
HGNC: | 17649 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
umbilical cord | 8.92e-19 | 10 |
blastocyst | 8.92e-19 | 10 |
blastula | 8.92e-19 | 10 |
bilaminar disc | 8.92e-19 | 10 |
inner cell mass | 8.92e-19 | 10 |
cleaving embryo | 8.92e-19 | 10 |
connecting stalk | 8.92e-19 | 10 |
inner cell mass derived epiblast | 8.92e-19 | 10 |
extraembryonic mesoderm | 8.92e-19 | 10 |
blood | 9.45e-13 | 15 |
haemolymphatic fluid | 9.45e-13 | 15 |
organism substance | 9.45e-13 | 15 |
extraembryonic structure | 3.37e-08 | 24 |
mouth mucosa | 5.11e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.08e-22 | 8 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.