FFCP PHASE1:Hg19::chr6:106534230..106534254,+: Difference between revisions
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{{FFCP | 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1837634,0.827463966895162,15.9925486425736,4.76128862927481,2.32520075409622,3.16581042908875,1.00918676322552,2.48223917284843,7.47833599145411,29.8271944618837,8.55583252713203,35.8986442567751,15.2768297486401,3.99192427855216,8.54734320415232,1.81436487992116,7.7228912914776,0.808426818959282,2.34640942403454,11.1239714206408,21.9723936290499,3.32878387092756,7.648404156459,3.20568492303233|short_description=p2@PRDM1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=639 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9346 | |||
|TSSclassifier=S | |||
|UniProt=F5H6S3 | |||
|association_with_transcript=-6bp_to_ENST00000456278_5end | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_2_at_PRDM1_5end | |||
|id=chr6:106534230..106534254,+ | |||
|ontology_enrichment_celltype=CL:0000738!4.24e-35!140;CL:0002087!5.04e-31!119;CL:0002031!2.89e-25!124;CL:0002057!1.32e-24!42;CL:0000860!6.63e-24!45;CL:0000037!2.52e-23!172;CL:0000566!2.52e-23!172;CL:0002009!3.57e-23!65;CL:0000766!3.23e-22!76;CL:0002194!5.69e-22!63;CL:0000576!5.69e-22!63;CL:0000040!5.69e-22!63;CL:0000559!5.69e-22!63;CL:0002032!9.09e-22!165;CL:0000837!9.09e-22!165;CL:0000988!1.52e-21!182;CL:0000557!1.69e-19!71;CL:0000839!3.05e-16!70;CL:0000763!3.45e-13!112;CL:0000049!3.45e-13!112;CL:0000542!1.37e-08!53;CL:0000051!1.37e-08!53;CL:0000838!2.16e-08!52 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.56e-21;33!CL:0002057;1.56e-21;33!CL:0000473;3.85e-18;39!CL:0000234;3.85e-18;39!CL:0000576;1.21e-15;48!CL:0000766;1.10e-10;69!CL:0002087;1.16e-10;104!CL:0000738;2.37e-08;136!CL:0000451;5.30e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.60e-38,136;CL:0002087,1.79e-33,115;CL:0002031,8.50e-28,120;CL:0000473,1.24e-26,48;CL:0000234,1.24e-26,48;CL:0000860,2.52e-26,42;CL:0002057,2.52e-26,42;CL:0000037,3.51e-26,168;CL:0002009,2.04e-25,61;CL:0000988,1.42e-24,177;CL:0000766,1.70e-24,72;CL:0002032,2.53e-24,161;CL:0000837,2.53e-24,161;CL:0002194,4.20e-24,59;CL:0000576,4.20e-24,59;CL:0000040,4.20e-24,59;CL:0000559,4.20e-24,59;CL:0000557,1.60e-21,67;CL:0000839,2.81e-18,66;CL:0000763,4.88e-15,108;CL:0000049,4.88e-15,108;CL:0000542,4.31e-09,53;CL:0000051,4.31e-09,53;CL:0000838,7.02e-09,52;CL:0000451,6.69e-07,10;CL:0000134,9.03e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;1.57e-19;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.39e-26!102;UBERON:0003061!6.39e-26!102;UBERON:0002193!3.17e-24!112;UBERON:0002371!8.86e-18!80;UBERON:0001474!2.40e-15!86;UBERON:0002405!1.35e-13!115;UBERON:0004765!5.29e-13!101;UBERON:0001434!5.29e-13!101;UBERON:0003081!4.68e-10!216;UBERON:0000178!7.15e-08!15;UBERON:0000179!7.15e-08!15;UBERON:0000463!7.15e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.41e-08;15!UBERON:0000179;2.41e-08;15!UBERON:0000463;2.41e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.11e-28,98;UBERON:0003061,1.11e-28,98;UBERON:0002193,2.05e-26,108;UBERON:0002371,8.04e-20,76;UBERON:0002405,1.25e-19,93;UBERON:0001474,2.54e-17,82;UBERON:0004765,1.14e-14,90;UBERON:0003081,2.04e-13,203;UBERON:0001434,2.39e-12,100;UBERON:0000178,2.42e-08,15;UBERON:0000179,2.42e-08,15;UBERON:0000463,2.42e-08,15 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,2.00146596706261,0.446961094427288,0,2.53299878168311,0,0,0.491467873003018,0,0.218441372130172,0,0.866364470720326,0.994192127183747,5.3786011716142,4.21886169616784,3.65155045193687,4.87932798790507,0.246242116153576,0,0.313454721478088,2.0036519099174,3.14811177667634,3.38965126905968,3.05653622991805,2.21671591514854,3.62069594042925,23.6018566109342,22.2621050896383,29.8795118000027,0,2.409647350226,4.80680213216824,0,4.83375390457233,1.46800219667424,175.616544504605,128.950079723301,109.590489711505,2.68698569087909,4.53451132426571,2.83333124397605,63.8298268242289,82.3769557241605,79.8101561307915,94.5986180206136,108.959490325784,147.110526175174,161.395432092726,163.686691472095,160.334951864461,107.905398070562,142.652115072026,131.363691996512,81.5089330219478,108.343741572965,114.833700551438,56.3194361962461,104.943791853883,106.76930000844,173.831635198399,155.980580260116,164.948978456153,46.723687419202,98.7250290962583,129.54702779108,152.00544248033,165.831568057624,155.941590498274,45.4049626975027,118.217121152008,110.76183560431,21.1255286311942,21.4730342964694,21.3851818418543,16.6246374096813,10.2120287132224,16.5547354297993,3.13514018115373,1.39241674039363,2.37463399894024,5.27988733383968,5.46138611262132,8.00558328477199,7.68114400619713,4.40435585739614,12.0698012390441,8.59358334620321,11.4486450544244,4.55370375287559,21.7277760067247,12.6150165281326,0,15.1337312005015,0.263384084775077,3.34406609193516,5.50215067848831,10.485676448975,7.02183280640848,0.32592226663359,0.473447805734733,0,16.711568532776,18.5601721709147,19.4949827233587,21.6643091012012,8.96639238079726,10.1446291096705,4.43982342429925,2.48715016007264,3.47763702882063,0,0,0,8.3848913596199,4.21542542962113,5.49803912772208,5.31341353240956,3.18565414324097,7.81300144627702,3.8018081777935,3.46322773878877,4.60751800155906,9.99445812418767,4.02521328474829,2.46338399076314,9.47551693156242,10.6976078313403,5.35850294366356,0,0,0.639312809217652,0,1.00267582127178,0,1.5905718941022,1.45990461090791,0.378139268656271,0,0.175669571386252,3.27447688744282,2.91436230634034,3.33705998505986,8.11368484136708,6.79105975467142,3.0580330919339,27.187931170809,23.4517913419852,20.0587050717965,1.39133685156694,0,1.04142150482278,1.13061588384802,1.25849830862972,1.6507082516404,2.50793959844173,1.8089173141853,1.77883131343355,13.0541038978221,2.41697590265488,0.760272105718513,3.66093086322254,1.10298924103761,1.62028389576352,0.357198913136319,0.44905874525234,1.0135033243499,1.53316637465883,1.89853131913626,2.5648244150257,100.153117251408,135.723092451914,1.3082821564276,0,0.12663051166458,1.32409180813219,1.14734648299525,1.06400514659507,0,0,0,0,0.404132016209064,0.817309515567294,0.151357427644931,0,0.468642863667593,0.936480230490962,4.56377457235559,3.43731965269142,1.87895197830024,1.29498355494505,0.98315564691574,3.67477508258808,0.122834317311768,2.27316718586684,0,3.4617370098998,0,0.718618141816238,2.35670559535693,1.25118519871964,3.3247693858102,0.438977620880838,0.919463387397059,2.70428506031874,0,0.717558542755448,1.2813443329114,0.423863802319124,2.10063767259082,2.67936576019941,0.772921620136887,1.30281799432113,2.53164498361899,0.389748020644795,2.77677151668526,1.47279837827679,0.323292113637624,1.42003837006646,1.20902517873168,1.3564847384839,6.1843473012255,4.90943017063502,5.16248271700207,0,0.265059536642971,0,0.310983165046111,0,0.36497735907583,1.56449532329816,5.78916844373597,1.38134921352481,2.78620756819187,0.721879481669586,2.01121560067735,2.02301628093722,1.92808823906786,1.98529150918309,3.05031221729369,2.13543557199987,0.808987848960987,1.17732879075208,1.92373578473195,3.69077727312324,1.40241773803446,0,0,1.26755034821831,1.96565443335525,1.77236972004421,0,0.860919069801795,0,3.95101027471052,1.1240175325762,6.73544115157927,5.64789515467031,0.651616610620649,1.03993478527958,0,1.04337364477569,0,0.288732895522148,0.925971025153221,0,0,0,2.21595305478658,1.40402559083543,1.63494278517601,0.93733833986777,5.03946384596579,3.54437743105966,8.68717670217628,6.68458058582112,7.28427090413901,0,0,0.414656231081544,0.144119953416961,0.12624243342638,0.190493682876507,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0.07333828582095,1.42198887333556,0,0.845302752556,6.11657668145202,2.08014873822732,0.257207374262142,0,0,0.142977993658148,0.542621605391443,1.64648067356154,0,0,2.37585561880029,0,0,0.099972991182057,13.378615870531,31.642196760224,10.5416969741516,0,0,8.5582143024431,1.44781306667579,0.821905290201534,4.65558504423729,5.26800176769578,11.4277840917118,7.76259269494262,5.13372145118993,1.01637849688985,1.30139853857622,0,0.335032530668698,0,59.9205619157746,26.9245313283622,43.0992133973477,0.49076596687656,1.00034104211935,0,1.45579603071565,1.07057393278297,2.20783381047509,1.05427273493442,0,0,0,1.99267679560631,2.58116835958384,1.30325421702124,0.391602314925481,0.343143423810856,15.7143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| |||
|short_description=p2@PRDM1 | |||
}} |
Revision as of 17:12, 13 September 2013
Short description: | p2@PRDM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_PRDM1_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | -6bp_to_ENST00000456278_5end |
EntrezGene: | PRDM1 |
HGNC: | 9346 |
UniProt: | F5H6S3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 2.60e-38 | 136 |
nongranular leukocyte | 1.79e-33 | 115 |
hematopoietic lineage restricted progenitor cell | 8.50e-28 | 120 |
defensive cell | 1.24e-26 | 48 |
phagocyte | 1.24e-26 | 48 |
classical monocyte | 2.52e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.52e-26 | 42 |
hematopoietic stem cell | 3.51e-26 | 168 |
macrophage dendritic cell progenitor | 2.04e-25 | 61 |
hematopoietic cell | 1.42e-24 | 177 |
myeloid leukocyte | 1.70e-24 | 72 |
hematopoietic oligopotent progenitor cell | 2.53e-24 | 161 |
hematopoietic multipotent progenitor cell | 2.53e-24 | 161 |
monopoietic cell | 4.20e-24 | 59 |
monocyte | 4.20e-24 | 59 |
monoblast | 4.20e-24 | 59 |
promonocyte | 4.20e-24 | 59 |
granulocyte monocyte progenitor cell | 1.60e-21 | 67 |
myeloid lineage restricted progenitor cell | 2.81e-18 | 66 |
myeloid cell | 4.88e-15 | 108 |
common myeloid progenitor | 4.88e-15 | 108 |
lymphocyte | 4.31e-09 | 53 |
common lymphoid progenitor | 4.31e-09 | 53 |
lymphoid lineage restricted progenitor cell | 7.02e-09 | 52 |
dendritic cell | 6.69e-07 | 10 |
mesenchymal cell | 9.03e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.11e-28 | 98 |
blood island | 1.11e-28 | 98 |
hemolymphoid system | 2.05e-26 | 108 |
bone marrow | 8.04e-20 | 76 |
immune system | 1.25e-19 | 93 |
bone element | 2.54e-17 | 82 |
skeletal element | 1.14e-14 | 90 |
lateral plate mesoderm | 2.04e-13 | 203 |
skeletal system | 2.39e-12 | 100 |
blood | 2.42e-08 | 15 |
haemolymphatic fluid | 2.42e-08 | 15 |
organism substance | 2.42e-08 | 15 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.