FFCP PHASE1:Hg19::chr6:151358048..151358060,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=25902|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=21055|TSSclassifier=N|UniProt=|association_with_transcript=-49bp_to_ENST00000450635_5end|coexpression_cluster_id=C1109|description=CAGE_peak_13_at_MTHFD1L_5end|id=chr6:151358048..151358060,+|ontology_enrichment_celltype=CL:0002076!3.80e-25!43;CL:0000223!2.07e-19!59;CL:0000244!1.14e-18!4;CL:0000731!1.14e-18!4;CL:0002368!1.07e-15!13;CL:0002166!2.64e-14!3;CL:0002621!3.01e-14!3;CL:0000066!5.56e-14!254;CL:0002159!1.02e-11!13;CL:0002327!8.88e-10!4;CL:0002251!3.57e-09!21;CL:0000220!4.74e-07!246;CL:0002321!6.03e-07!248;CL:0002231!7.75e-07!3;CL:0000240!8.08e-07!6;CL:0000311!8.08e-07!6;CL:0000079!8.08e-07!6;CL:0000237!8.08e-07!6;CL:0000036!8.08e-07!6;CL:0000357!8.08e-07!6;CL:0000114!8.08e-07!6;CL:0000068!8.94e-07!3;CL:0000069!8.94e-07!3;CL:0000307!8.94e-07!3;CL:0000377!8.94e-07!3|ontology_enrichment_celltype_v019=CL:0000244;2.53e-53;4!CL:0000731;2.53e-53;4!CL:0002166;5.00e-40;3!CL:0002621;8.68e-19;3!CL:0002159;2.44e-15;14!CL:0002076;6.98e-10;42!CL:0002368;9.19e-10;13!CL:0000575;7.27e-08;2|ontology_enrichment_celltype_v019_2=CL:0000244,1.81e-53,4;CL:0000731,1.81e-53,4;CL:0002166,3.83e-40,3;CL:0002621,8.69e-19,3;CL:0002159,2.49e-15,14;CL:0002076,3.73e-11,42;CL:0000066,3.03e-10,253;CL:0002368,8.66e-10,13;CL:0000223,5.50e-08,58;CL:0000575,8.60e-08,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:1749!2.55e-10!14|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000365!3.86e-22!5;UBERON:0005910!2.09e-18!6;UBERON:0001949!3.01e-14!3;UBERON:0001708!7.73e-11!4;UBERON:0001704!7.73e-11!4;UBERON:0001911!8.88e-10!4;UBERON:0005333!8.88e-10!4;UBERON:0008425!8.88e-10!4;UBERON:0005311!8.88e-10!4;UBERON:0003729!4.42e-08!5;UBERON:0004119!5.48e-08!169;UBERON:0000925!5.48e-08!169;UBERON:0006595!5.48e-08!169;UBERON:0001004!2.28e-07!72;UBERON:0002090!2.37e-07!6|ontology_enrichment_uberon_v019=UBERON:0000365;9.08e-43;5!UBERON:0000486;1.43e-39;12!UBERON:0005910;1.00e-35;6!UBERON:0001708;3.17e-30;4!UBERON:0008895;3.17e-30;4!UBERON:0011159;2.46e-24;5!UBERON:0001949;8.68e-19;3!UBERON:0005911;8.77e-13;36!UBERON:0011137;2.03e-11;11!UBERON:0010323;2.03e-11;11!UBERON:0003929;1.37e-08;7!UBERON:0000075;5.06e-08;16!UBERON:0003350;1.27e-07;8!UBERON:0001828;1.27e-07;8!UBERON:0006554;2.23e-07;30!UBERON:0001008;2.23e-07;30|ontology_enrichment_uberon_v019_2=UBERON:0000365,6.95e-43,5;UBERON:0005910,8.03e-36,6;UBERON:0001708,2.59e-30,4;UBERON:0008895,2.59e-30,4;UBERON:0011159,2.10e-24,5;UBERON:0010188,1.86e-20,6;UBERON:0002539,1.86e-20,6;UBERON:0008816,1.86e-20,6;UBERON:0001949,8.69e-19,3;UBERON:0010323,1.89e-11,11;UBERON:0005911,1.12e-09,82;UBERON:0011137,4.07e-09,14;UBERON:0000033,3.30e-08,56;UBERON:0000075,4.82e-08,16;UBERON:0003350,1.27e-07,8;UBERON:0001828,1.27e-07,8;UBERON:0000153,2.22e-07,62;UBERON:0007811,2.22e-07,62;UBERON:0008814,3.32e-07,18;UBERON:0004119,3.83e-07,160;UBERON:0000925,3.83e-07,160;UBERON:0006595,3.83e-07,160;UBERON:0006554,4.21e-07,47;UBERON:0001008,5.95e-07,48|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,1.83884244895785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45718115317017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51239109112286,0.818238361772504,2.00763216772303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439001141634502,0,0.402115889646523,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87467667973554,1.51183915378974,3.40260233381728,0.0895585227028483,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.0303882181971,0.368323955743585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0.495854746082934,1.53752053892085,5.23212121227795,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.673554789078584,0.670302275535787,0,0,9.04061282609583,1.68471475667626,1.7737206141467,12.6347870113828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568967241427498,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195984794828755,0.174118413160805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=25902 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21055 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-49bp_to_ENST00000450635_5end | |||
|coexpression_cluster_id=C1109 | |||
|description=CAGE_peak_13_at_MTHFD1L_5end | |||
|id=chr6:151358048..151358060,+ | |||
|ontology_enrichment_celltype=CL:0002076!3.80e-25!43;CL:0000223!2.07e-19!59;CL:0000244!1.14e-18!4;CL:0000731!1.14e-18!4;CL:0002368!1.07e-15!13;CL:0002166!2.64e-14!3;CL:0002621!3.01e-14!3;CL:0000066!5.56e-14!254;CL:0002159!1.02e-11!13;CL:0002327!8.88e-10!4;CL:0002251!3.57e-09!21;CL:0000220!4.74e-07!246;CL:0002321!6.03e-07!248;CL:0002231!7.75e-07!3;CL:0000240!8.08e-07!6;CL:0000311!8.08e-07!6;CL:0000079!8.08e-07!6;CL:0000237!8.08e-07!6;CL:0000036!8.08e-07!6;CL:0000357!8.08e-07!6;CL:0000114!8.08e-07!6;CL:0000068!8.94e-07!3;CL:0000069!8.94e-07!3;CL:0000307!8.94e-07!3;CL:0000377!8.94e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000244;2.53e-53;4!CL:0000731;2.53e-53;4!CL:0002166;5.00e-40;3!CL:0002621;8.68e-19;3!CL:0002159;2.44e-15;14!CL:0002076;6.98e-10;42!CL:0002368;9.19e-10;13!CL:0000575;7.27e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,1.81e-53,4;CL:0000731,1.81e-53,4;CL:0002166,3.83e-40,3;CL:0002621,8.69e-19,3;CL:0002159,2.49e-15,14;CL:0002076,3.73e-11,42;CL:0000066,3.03e-10,253;CL:0002368,8.66e-10,13;CL:0000223,5.50e-08,58;CL:0000575,8.60e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!2.55e-10!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000365!3.86e-22!5;UBERON:0005910!2.09e-18!6;UBERON:0001949!3.01e-14!3;UBERON:0001708!7.73e-11!4;UBERON:0001704!7.73e-11!4;UBERON:0001911!8.88e-10!4;UBERON:0005333!8.88e-10!4;UBERON:0008425!8.88e-10!4;UBERON:0005311!8.88e-10!4;UBERON:0003729!4.42e-08!5;UBERON:0004119!5.48e-08!169;UBERON:0000925!5.48e-08!169;UBERON:0006595!5.48e-08!169;UBERON:0001004!2.28e-07!72;UBERON:0002090!2.37e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;9.08e-43;5!UBERON:0000486;1.43e-39;12!UBERON:0005910;1.00e-35;6!UBERON:0001708;3.17e-30;4!UBERON:0008895;3.17e-30;4!UBERON:0011159;2.46e-24;5!UBERON:0001949;8.68e-19;3!UBERON:0005911;8.77e-13;36!UBERON:0011137;2.03e-11;11!UBERON:0010323;2.03e-11;11!UBERON:0003929;1.37e-08;7!UBERON:0000075;5.06e-08;16!UBERON:0003350;1.27e-07;8!UBERON:0001828;1.27e-07;8!UBERON:0006554;2.23e-07;30!UBERON:0001008;2.23e-07;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,6.95e-43,5;UBERON:0005910,8.03e-36,6;UBERON:0001708,2.59e-30,4;UBERON:0008895,2.59e-30,4;UBERON:0011159,2.10e-24,5;UBERON:0010188,1.86e-20,6;UBERON:0002539,1.86e-20,6;UBERON:0008816,1.86e-20,6;UBERON:0001949,8.69e-19,3;UBERON:0010323,1.89e-11,11;UBERON:0005911,1.12e-09,82;UBERON:0011137,4.07e-09,14;UBERON:0000033,3.30e-08,56;UBERON:0000075,4.82e-08,16;UBERON:0003350,1.27e-07,8;UBERON:0001828,1.27e-07,8;UBERON:0000153,2.22e-07,62;UBERON:0007811,2.22e-07,62;UBERON:0008814,3.32e-07,18;UBERON:0004119,3.83e-07,160;UBERON:0000925,3.83e-07,160;UBERON:0006595,3.83e-07,160;UBERON:0006554,4.21e-07,47;UBERON:0001008,5.95e-07,48 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,1.83884244895785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45718115317017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51239109112286,0.818238361772504,2.00763216772303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439001141634502,0,0.402115889646523,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87467667973554,1.51183915378974,3.40260233381728,0.0895585227028483,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.0303882181971,0.368323955743585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0.495854746082934,1.53752053892085,5.23212121227795,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.673554789078584,0.670302275535787,0,0,9.04061282609583,1.68471475667626,1.7737206141467,12.6347870113828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568967241427498,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195984794828755,0.174118413160805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490738592505128,0,0,0.346576998451015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383287282918786,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05868461514708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p13@MTHFD1L | |||
}} |
Revision as of 18:45, 13 September 2013
Short description: | p13@MTHFD1L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_MTHFD1L_5end |
Coexpression cluster: | C1109_Urothelial_Small_Gingival_Mallassezderived_Prostate_Sebocyte_Bronchial |
Association with transcript: | -49bp_to_ENST00000450635_5end |
EntrezGene: | MTHFD1L |
HGNC: | 21055 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 1.81e-53 | 4 |
urothelial cell | 1.81e-53 | 4 |
epithelial cell of Malassez | 3.83e-40 | 3 |
gingival epithelial cell | 8.69e-19 | 3 |
general ecto-epithelial cell | 2.49e-15 | 14 |
endo-epithelial cell | 3.73e-11 | 42 |
epithelial cell | 3.03e-10 | 253 |
respiratory epithelial cell | 8.66e-10 | 13 |
endodermal cell | 5.50e-08 | 58 |
corneal epithelial cell | 8.60e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
urothelium | 6.95e-43 | 5 |
transitional epithelium | 8.03e-36 | 6 |
jaw skeleton | 2.59e-30 | 4 |
splanchnocranium | 2.59e-30 | 4 |
primary subdivision of cranial skeletal system | 2.10e-24 | 5 |
protuberance | 1.86e-20 | 6 |
pharyngeal arch | 1.86e-20 | 6 |
embryonic head | 1.86e-20 | 6 |
gingival epithelium | 8.69e-19 | 3 |
cranial skeletal system | 1.89e-11 | 11 |
endo-epithelium | 1.12e-09 | 82 |
axial skeletal system | 4.07e-09 | 14 |
head | 3.30e-08 | 56 |
subdivision of skeletal system | 4.82e-08 | 16 |
epithelium of mucosa | 1.27e-07 | 8 |
gingiva | 1.27e-07 | 8 |
anterior region of body | 2.22e-07 | 62 |
craniocervical region | 2.22e-07 | 62 |
pharyngeal arch system | 3.32e-07 | 18 |
endoderm-derived structure | 3.83e-07 | 160 |
endoderm | 3.83e-07 | 160 |
presumptive endoderm | 3.83e-07 | 160 |
urinary system structure | 4.21e-07 | 47 |
renal system | 5.95e-07 | 48 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.