FFCP PHASE1:Mm9::chr1:33964922..33964935,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=13518|HGNC=|MCL_coexpression_id=20|UniProt=|association_with_transcript=-134bp_to_uc007aof.1_5end|description=CAGE_peak_14_at_Dst_5end|id=chr1:33964922..33964935,+|ontology_enrichment_celltype=CL:0000055!6.99e-08!50;CL:0000393!5.54e-07!39;CL:0000211!5.54e-07!39|ontology_enrichment_celltype_v019_2=CL:0000349,1.08e-08,3;CL:0000351,1.08e-08,3;CL:0002614,2.84e-08,3;CL:0002610,1.71e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!2.19e-11!75;UBERON:0001016!2.19e-11!75;UBERON:0001017!2.12e-10!73;UBERON:0005743!2.12e-10!73;UBERON:0001049!3.25e-09!52;UBERON:0005068!3.25e-09!52;UBERON:0006241!3.25e-09!52;UBERON:0007135!3.25e-09!52;UBERON:0004121!6.33e-09!102;UBERON:0000924!6.33e-09!102;UBERON:0006601!6.33e-09!102;UBERON:0000955!1.19e-08!50;UBERON:0006238!1.19e-08!50;UBERON:0002616!1.98e-08!49;UBERON:0000025!5.30e-07!114;UBERON:0004111!8.02e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0004733,3.75e-11,6;UBERON:0004732,3.75e-11,6;UBERON:0002028,3.75e-11,6;UBERON:0007277,3.75e-11,6;UBERON:0002950,2.83e-10,4;UBERON:0001891,2.83e-10,4;UBERON:0009616,2.83e-10,4;UBERON:0010286,2.83e-10,4;UBERON:0003076,8.09e-10,12;UBERON:0003057,8.09e-10,12;UBERON:0000358,1.08e-08,3;UBERON:0000307,1.08e-08,3;UBERON:0007010,1.08e-08,3;UBERON:0005631,2.14e-08,3;UBERON:0000478,2.14e-08,3;UBERON:0000158,2.14e-08,3;UBERON:0002038,2.84e-08,3;UBERON:0009663,2.84e-08,3;UBERON:0009661,2.84e-08,3;UBERON:0000125,2.84e-08,3;UBERON:0002308,2.84e-08,3;UBERON:0001016,1.41e-07,75;UBERON:0004684,1.71e-07,3;UBERON:0002275,1.71e-07,3;UBERON:0000073,5.38e-07,54;UBERON:0001017,7.29e-07,73|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0.699561878128147,0.157731082679119,0,0.42438965179803,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.709638518536602,0.550640256485045,3.9119567217402,0,0.219686182734472,0.972149495371417,1.53985063787899,0,0,0,0,0.771778308107841,1.14613375975503,1.03134418455488,0.202316460859598,0,1.26766280701236,0.677689064138264,2.66788438833342,1.3498495759221,1.97773272513395,0.7104801149461,0.299600110518405,0,0.414758449233911,0.540023753326763,0.420649922702764,0.571301968807607,1.10434270475807,0.367472397644862,0.191690942036473,0,1.10115880999389,1.65993539510744,2.4577045320999,0.263772575460388,0,0,4.74611098302348,1.68828783009504,2.44477196442896,0.883885756421003,0.854230084794618,0.186399445825301,3.10477392666055,0.755715601067855,0.289864488701678,0,0,0,0,0,0.140444420131752,0.340860645156116,0.259786004602869,1.06001872353102,0.14084341977668,1.28326477414318,2.54805239706646,0,0,0.253359865475099,0.505524445014783,0.11418387971906,0.258937883647172,0.29688427812965,0,0,0.230615497256059,0.150722640552623,0,0.125666591329675,1.48316980640624,0.144599356919912,0,0.647067399789637,0.220841518460394,1.45462575940567,0,2.92780797011547,2.93225389538837,0,0.239630249011841,0,0.127070227073065,1.64769703345305,0.457500602818626,0.376963056338593,0.695297280769106,0.511430914660661,2.49345653471472,0.973447578406546,0.203678727700633,0.248813941220186,0,0.210441855886474,0.130120442962704,0,0,0,0.204109497453984,0,0,0,0,0,0,0,0,0,0.411564272815887,0.199034266818493,0,0.257347907114715,0,0.621377317606506,0,0.180062061461015,0.23674473558521,0,0.154267112887378,0,0,0.233530684734339,0.16455984991348,0,0.0810688095458557,0,0.219550115291051,0.402619256281115,0.420579897128254,0.308713837137853,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0.667380422864376,0,0.224862112384854,0.202860121388503,0.482354319504834,0,0,0.162135226775035,0.274561413188081,2.87536413054709,0,0,0,0,0,1.10851914099963,0,0,0,0,0,0,0.195133647857799,0.157635144106191,0,0.637819074629948,0.327726629431476,0.690739927463582,1.15719246865209,0,0.54390568381871,0,0.551873492609465,4.65596710964597,3.28192722458169,0.163934945376675,0,0.315508219416257,0,0,0.477937595905104,0.222798674082394,0.283076530788832,0.404810701674894,0.292255857911312,0,0.321321316421807,0.283880170416537,0,0,0.164970122972535,0,0,0,0.188605079755898,0,0.307435147943927,0.516856586336442,1.09060118843252,0.356497378384721,0,0,0,0.340439605753788,0.18006109403131,0,0,0,0,0.658196082408484,0,4.4587624532105,3.1774810629573,0,0,0,0.180938774784468,0.358117032009409,0.492422699235184,0,4.45020724825223,0.512612642393558,0,0,0,0,0,0,0,0.138199973804424,0,0.316335993581135,0,0,0.209088296014469,0,0,0,0.26175594198403,0.129614973291793,0,0.56369293868419,0,0.165458490457098,0,0,0,0.117357238645754,0.39061315453185,0.943734099831398,0.483168241652012,0.288030006257865,0,0,0,0,0,0,0.240390899039938,0,0,0,0,0,0.192423683280659,0,0.680191150845634,3.10780334723691,2.6017018416748,5.03653849092235,0.386379188064381,0.187682475451182,0.183151624267265,0,0.501572104035363,0.564751842617067,0.920650473014354,0.572895513439397,1.3748254587495,0,0,0,0.900642406448441,0,0.51776031175182,0,0,0,0,0,0,0,0.20603505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| ||
|EntrezGene=13518 | |||
|HGNC= | |||
|MCL_coexpression_id=20 | |||
|UniProt= | |||
|association_with_transcript=-134bp_to_uc007aof.1_5end | |||
|description=CAGE_peak_14_at_Dst_5end | |||
|id=chr1:33964922..33964935,+ | |||
|ontology_enrichment_celltype=CL:0000055!6.99e-08!50;CL:0000393!5.54e-07!39;CL:0000211!5.54e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.08e-08,3;CL:0000351,1.08e-08,3;CL:0002614,2.84e-08,3;CL:0002610,1.71e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.19e-11!75;UBERON:0001016!2.19e-11!75;UBERON:0001017!2.12e-10!73;UBERON:0005743!2.12e-10!73;UBERON:0001049!3.25e-09!52;UBERON:0005068!3.25e-09!52;UBERON:0006241!3.25e-09!52;UBERON:0007135!3.25e-09!52;UBERON:0004121!6.33e-09!102;UBERON:0000924!6.33e-09!102;UBERON:0006601!6.33e-09!102;UBERON:0000955!1.19e-08!50;UBERON:0006238!1.19e-08!50;UBERON:0002616!1.98e-08!49;UBERON:0000025!5.30e-07!114;UBERON:0004111!8.02e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004733,3.75e-11,6;UBERON:0004732,3.75e-11,6;UBERON:0002028,3.75e-11,6;UBERON:0007277,3.75e-11,6;UBERON:0002950,2.83e-10,4;UBERON:0001891,2.83e-10,4;UBERON:0009616,2.83e-10,4;UBERON:0010286,2.83e-10,4;UBERON:0003076,8.09e-10,12;UBERON:0003057,8.09e-10,12;UBERON:0000358,1.08e-08,3;UBERON:0000307,1.08e-08,3;UBERON:0007010,1.08e-08,3;UBERON:0005631,2.14e-08,3;UBERON:0000478,2.14e-08,3;UBERON:0000158,2.14e-08,3;UBERON:0002038,2.84e-08,3;UBERON:0009663,2.84e-08,3;UBERON:0009661,2.84e-08,3;UBERON:0000125,2.84e-08,3;UBERON:0002308,2.84e-08,3;UBERON:0001016,1.41e-07,75;UBERON:0004684,1.71e-07,3;UBERON:0002275,1.71e-07,3;UBERON:0000073,5.38e-07,54;UBERON:0001017,7.29e-07,73 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0.699561878128147,0.157731082679119,0,0.42438965179803,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.709638518536602,0.550640256485045,3.9119567217402,0,0.219686182734472,0.972149495371417,1.53985063787899,0,0,0,0,0.771778308107841,1.14613375975503,1.03134418455488,0.202316460859598,0,1.26766280701236,0.677689064138264,2.66788438833342,1.3498495759221,1.97773272513395,0.7104801149461,0.299600110518405,0,0.414758449233911,0.540023753326763,0.420649922702764,0.571301968807607,1.10434270475807,0.367472397644862,0.191690942036473,0,1.10115880999389,1.65993539510744,2.4577045320999,0.263772575460388,0,0,4.74611098302348,1.68828783009504,2.44477196442896,0.883885756421003,0.854230084794618,0.186399445825301,3.10477392666055,0.755715601067855,0.289864488701678,0,0,0,0,0,0.140444420131752,0.340860645156116,0.259786004602869,1.06001872353102,0.14084341977668,1.28326477414318,2.54805239706646,0,0,0.253359865475099,0.505524445014783,0.11418387971906,0.258937883647172,0.29688427812965,0,0,0.230615497256059,0.150722640552623,0,0.125666591329675,1.48316980640624,0.144599356919912,0,0.647067399789637,0.220841518460394,1.45462575940567,0,2.92780797011547,2.93225389538837,0,0.239630249011841,0,0.127070227073065,1.64769703345305,0.457500602818626,0.376963056338593,0.695297280769106,0.511430914660661,2.49345653471472,0.973447578406546,0.203678727700633,0.248813941220186,0,0.210441855886474,0.130120442962704,0,0,0,0.204109497453984,0,0,0,0,0,0,0,0,0,0.411564272815887,0.199034266818493,0,0.257347907114715,0,0.621377317606506,0,0.180062061461015,0.23674473558521,0,0.154267112887378,0,0,0.233530684734339,0.16455984991348,0,0.0810688095458557,0,0.219550115291051,0.402619256281115,0.420579897128254,0.308713837137853,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0.667380422864376,0,0.224862112384854,0.202860121388503,0.482354319504834,0,0,0.162135226775035,0.274561413188081,2.87536413054709,0,0,0,0,0,1.10851914099963,0,0,0,0,0,0,0.195133647857799,0.157635144106191,0,0.637819074629948,0.327726629431476,0.690739927463582,1.15719246865209,0,0.54390568381871,0,0.551873492609465,4.65596710964597,3.28192722458169,0.163934945376675,0,0.315508219416257,0,0,0.477937595905104,0.222798674082394,0.283076530788832,0.404810701674894,0.292255857911312,0,0.321321316421807,0.283880170416537,0,0,0.164970122972535,0,0,0,0.188605079755898,0,0.307435147943927,0.516856586336442,1.09060118843252,0.356497378384721,0,0,0,0.340439605753788,0.18006109403131,0,0,0,0,0.658196082408484,0,4.4587624532105,3.1774810629573,0,0,0,0.180938774784468,0.358117032009409,0.492422699235184,0,4.45020724825223,0.512612642393558,0,0,0,0,0,0,0,0.138199973804424,0,0.316335993581135,0,0,0.209088296014469,0,0,0,0.26175594198403,0.129614973291793,0,0.56369293868419,0,0.165458490457098,0,0,0,0.117357238645754,0.39061315453185,0.943734099831398,0.483168241652012,0.288030006257865,0,0,0,0,0,0,0.240390899039938,0,0,0,0,0,0.192423683280659,0,0.680191150845634,3.10780334723691,2.6017018416748,5.03653849092235,0.386379188064381,0.187682475451182,0.183151624267265,0,0.501572104035363,0.564751842617067,0.920650473014354,0.572895513439397,1.3748254587495,0,0,0,0.900642406448441,0,0.51776031175182,0,0,0,0,0,0,0,0.206035057238894,0.320919209591815,0,0.50695859978048,0.188626341386076,0.37456602987953,0.0640251524048693,0.17230640686684,0,0.231768651889711,0,0,0.294397840268795,0,0.354951612318675,0.238436189947321,0.145346416632329,0.0941093804153306,0,0.182927972872773,0,0,0,0.237270036248348,0.0985044823755635,0,0.154936841185966,0,0.249810577937946,0.233931608445408,0.429742108096597,0,0,0.231867835620421 | |||
|short_description=p14@Dst | |||
}} |
Revision as of 20:14, 13 September 2013
Short description: | p14@Dst |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_14_at_Dst_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | -134bp_to_uc007aof.1_5end |
EntrezGene: | Dst |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.08e-08 | 3 |
trophoblast cell | 1.08e-08 | 3 |
neuron of the substantia nigra | 2.84e-08 | 3 |
raphe nuclei neuron | 1.71e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
segmental subdivision of hindbrain | 3.75e-11 | 6 |
segmental subdivision of nervous system | 3.75e-11 | 6 |
hindbrain | 3.75e-11 | 6 |
presumptive hindbrain | 3.75e-11 | 6 |
regional part of midbrain | 2.83e-10 | 4 |
midbrain | 2.83e-10 | 4 |
presumptive midbrain | 2.83e-10 | 4 |
midbrain neural tube | 2.83e-10 | 4 |
posterior neural tube | 8.09e-10 | 12 |
chordal neural plate | 8.09e-10 | 12 |
blastocyst | 1.08e-08 | 3 |
blastula | 1.08e-08 | 3 |
cleaving embryo | 1.08e-08 | 3 |
extraembryonic membrane | 2.14e-08 | 3 |
extraembryonic structure | 2.14e-08 | 3 |
membranous layer | 2.14e-08 | 3 |
substantia nigra | 2.84e-08 | 3 |
telencephalic nucleus | 2.84e-08 | 3 |
midbrain nucleus | 2.84e-08 | 3 |
neural nucleus | 2.84e-08 | 3 |
nucleus of brain | 2.84e-08 | 3 |
nervous system | 1.41e-07 | 75 |
raphe nuclei | 1.71e-07 | 3 |
reticular formation | 1.71e-07 | 3 |
regional part of nervous system | 5.38e-07 | 54 |
central nervous system | 7.29e-07 | 73 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.